Ss1.1-Ova1-OVR010019C06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCGCTCCTCCCGGCATGGAAGTGGCGGGGGTGCTGCTGTGTCTGGCGGCGGCGGTCCT GGCATGGGGCCTCCTCAGGGTCTGGGACGCCTGGGAGCGAATGAAGAGTCAGGAGCAGGC GGGCCTGCCGGGAGGCGGAAGCCGCGCTCTCCTGGTGACCGCGCACCCCGACGATGAAGC CATGTTCTTTGCTCCCACTATTCTGGGCTTGGCCCGCCTGGGGCACCAGCTGTCCCTGCT CTGCTTCTCTGCAGGAGATTACTACAATCAAGGGGAGATTCGTAAGAAAGAACTCCTGCA GAGCTGTGACGTGTTGGGGATCCCATCCTCCAGCGTAACAATCATTGACAACAGGGACTT CCCAGACAACCCGGCTGTGCGGTGGGACCCAGGGCGGGTGGCCGACGTCCTCCTCCGGCA CATAGAGCTGAACGGCATCGACCTGGTGGTGACCTTCGACGCAGGCGGAGTGAGTGGTCA CAGCAACCACGTGGCCCTGTATGCGGCCGCCAGGACCCTGTGCGCAGAAGGGAAGCTCCC TAAAGGGTGCAAGGTGCTCGCACTGCAGTCTGTGAACCGGCTGCGGAAGTACATCTCCCT GCTGGACCTGCCCTGCTCCCTGCTGCTCGCCCGCGATGCCCTCTTCGTGCTCACCCGCCA GGAGGTGGCCCAGGCCCAGAAAGCCATGTCCCGCCACCGCAGCCAGCTCCTCTGGTTCCG CCGCCTGTACGTGCTCTTCTCCAGGTACCTGAGGATCAACTCCCTGCGCCGCCTCTGAGC CTGGGGGCCAGGGCTCGTCCGCAGCGGGCACGGCGCCCCTCCAGCCGGTCGGCCGGCCTC TGCCCAAAGGGAGGCTGTGCAGACCAGAGTGTCCCCCTCTGGGAGCAAAACCAAACAACC GCACACCAGCCAGCCTGAGGATGACTCCAGGCACCCCGCTGCGTCTCAAGCTCTTGTGGG AAACAGCTCACCCAAGGGCACAGTGCAGTCAACCCCCACCCCAGCCCCCTGTCGTTACAA AAGAGCCTCGAGGCGCTGAAATCCCTTCTCAGGTGCCGTGTATTTTCATGCTGTCACCAG ACAGACACACGCACCGAGGACCAGTCTCCGCTGAATTCGTCCAACCCTGGTTCCTGCACA GGCCACATCTGCGTCTAGGGAAACGTCTCCGTTTAACGTCACTGCTGCAGGCCGGGCTGC CGAGGCCCAATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCGCTCCTCCCGGCATGGAAGTGGCGGGGGTGCTGCTGTGTCTGGCGGCGGCGGTCCT GGCATGGGGCCTCCTCAGGGTCTGGGACGCCTGGGAGCGAATGAAGAGTCAGGAGCAGGC GGGCCTGCCGGGAGGCGGAAGCCGCGCTCTCCTGGTGACCGCGCACCCCGACGATGAAGC CATGTTCTTTGCTCCCACTATTCTGGGCTTGGCCCGCCTGGGGCACCAGCTGTCCCTGCT CTGCTTCTCTGCAGGAGATTACTACAATCAAGGGGAGATTCGTAAGAAAGAACTCCTGCA GAGCTGTGACGTGTTGGGGATCCCATCCTCCAGCGTAACAATCATTGACAACAGGGACTT CCCAGACAACCCGGCTGTGCGGTGGGACCCAGGGCGGGTGGCCGACGTCCTCCTCCGGCA CATAGAGCTGAACGGCATCGACCTGGTGGTGACCTTCGACGCAGGCGGAGTGAGTGGTCA CAGCAACCACGTGGCCCTGTATGCGGCCGCCAGGACCCTGTGCGCAGAAGGGAAGCTCCC TAAAGGGTGCAAGGTGCTCGCACTGCAGTCTGTGAACCGGCTGCGGAAGTACATCTCCCT GCTGGACCTGCCCTGCTCCCTGCTGCTCGCCCGCGATGCCCTCTTCGTGCTCACCCGCCA GGAGGTGGCCCAGGCCCAGAAAGCCATGTCCCGCCACCGCAGCCAGCTCCTCTGGTTCCG CCGCCTGTACGTGCTCTTCTCCAGGTACCTGAGGATCAACTCCCTGCGCCGCCTCTGAGC CTGGGGGCCAGGGCTCGTCCGCAGCGGGCACGGCGCCCCTCCAGCCGGTCGGCCGGCCTC TGCCCAAAGGGAGGCTGTGCAGACCAGAGTGTCCCCCTCTGGGAGCAAAACCAAACAACC GCACACCAGCCAGCCTGAGGATGACTCCAGGCACCCCGCTGCGTCTCAAGCTCTTGTGGG AAACAGCTCACCCAAGGGCACAGTGCAGTCAACCCCCACCCCAGCCCCCTGTCGTTACAA AAGAGCCTCGAGGCGCTGAAATCCCTTCTCAGGTGCCGTGTATTTTCATGCTGTCACCAG ACAGACACACGCACCGAGGACCAGTCTCCGCTGAATTCGTCCAACCCTGGTTCCTGCACA GGCCACATCTGCGTCTAGGGAAACGTCTCCGTTTAACGTCACTGCTGCAGGCCGGGCTGC CGAGGCCCAATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 14-255, gnl|bosTau2|chr19 (23840304-23840063) | |
| 14-255, gnl|canFam2|chr5 (42687090-42686806) | |
| 14-255, gnl|dasNov1|scaffold_80197 (3265-3547) | |
| 14-255, gnl|echTel1|scaffold_284154 (492-748) | |
| 14-255, gnl|hg17|chr17 (16061153-16061434) | |
| 14-255, gnl|Hg17|chr17 (16061265-16061501) | |
| 14-255, gnl|mm7|chr11 (62539903-62540186) | |
| 14-255, gnl|Mm7|chr11 (62540016-62540253) | |
| 14-255, gnl|monDom2|scaffold_86 (5681644-5681917) | |
| 14-255, gnl|panTro1|chr19_random (4937351-4937632) | |
| 14-255, gnl|rheMac2|chr16 (16245436-16245156) | |
| 14-255, gnl|rn3|chr10 (48643185-48643466) | |
| 544-679, gnl|bosTau2|chr19 (23800774-23800639) | |
| 544-679, gnl|canFam2|chr5 (42610296-42610180) | |
| 544-679, gnl|danRer3|chr5 (49045020-49044910) | |
| 544-679, gnl|dasNov1|scaffold_36434 (7526-7409) | |
| 544-679, gnl|echTel1|scaffold_315184 (74-188) | |
| 544-679, gnl|fr1|chrUn (253504495-253504597) | |
| 544-679, gnl|hg17|chr17 (16161799-16161915) | |
| 544-679, gnl|Hg17|chr17 (16161812-16161947) | |
| 544-679, gnl|loxAfr1|scaffold_75432 (1513-1626) | |
| 544-679, gnl|mm7|chr11 (62593690-62593805) | |
| 544-679, gnl|Mm7|chr11 (62593702-62593837) | |
| 544-679, gnl|panTro1|chr19_random (5038378-5038494) | |
| 544-679, gnl|rheMac2|chr16 (16147524-16147408) | |
| 544-679, gnl|rn3|chr10 (48701326-48701441) | |
| 852-1095, gnl|bosTau2|chr19 (23798481-23798233) | |
| 852-1095, gnl|Hg17|chr17 (16170085-16170341) | |
| 852-1095, gnl|Mm7|chr11 (62594726-62594939) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-255, gnl|bosTau2|chr19 (23840304-23840063) | |
| 14-255, gnl|canFam2|chr5 (42687090-42686806) | |
| 14-255, gnl|dasNov1|scaffold_80197 (3265-3547) | |
| 14-255, gnl|echTel1|scaffold_284154 (492-748) | |
| 14-255, gnl|hg17|chr17 (16061153-16061434) | |
| 14-255, gnl|Hg17|chr17 (16061265-16061501) | |
| 14-255, gnl|mm7|chr11 (62539903-62540186) | |
| 14-255, gnl|Mm7|chr11 (62540016-62540253) | |
| 14-255, gnl|monDom2|scaffold_86 (5681644-5681917) | |
| 14-255, gnl|panTro1|chr19_random (4937351-4937632) | |
| 14-255, gnl|rheMac2|chr16 (16245436-16245156) | |
| 14-255, gnl|rn3|chr10 (48643185-48643466) | |
| 544-679, gnl|bosTau2|chr19 (23800774-23800639) | |
| 544-679, gnl|canFam2|chr5 (42610296-42610180) | |
| 544-679, gnl|danRer3|chr5 (49045020-49044910) | |
| 544-679, gnl|dasNov1|scaffold_36434 (7526-7409) | |
| 544-679, gnl|echTel1|scaffold_315184 (74-188) | |
| 544-679, gnl|fr1|chrUn (253504495-253504597) | |
| 544-679, gnl|hg17|chr17 (16161799-16161915) | |
| 544-679, gnl|Hg17|chr17 (16161812-16161947) | |
| 544-679, gnl|loxAfr1|scaffold_75432 (1513-1626) | |
| 544-679, gnl|mm7|chr11 (62593690-62593805) | |
| 544-679, gnl|Mm7|chr11 (62593702-62593837) | |
| 544-679, gnl|panTro1|chr19_random (5038378-5038494) | |
| 544-679, gnl|rheMac2|chr16 (16147524-16147408) | |
| 544-679, gnl|rn3|chr10 (48701326-48701441) | |
| 852-1095, gnl|bosTau2|chr19 (23798481-23798233) | |
| 852-1095, gnl|Hg17|chr17 (16170085-16170341) | |
| 852-1095, gnl|Mm7|chr11 (62594726-62594939) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cki (0.165235) | |
| cag (0.151194) | |
| jca (0.11396) | |
| jej (0.0989218) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| cag (0.151194) | |
| jca (0.11396) | |
| jej (0.0989218) |