Ss1.1-Ova1-OVR010020F01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTACAAAGTTGCTTGGTGGCCAGCAGCATATTCTTTCGGGAATGCAGGTCGCTGGGGTCC GTGTGCTGCCGGTTCAAATACTCAGAAACAGCTTTGGCGGGAAACTCTGTTTCACAAATG TACCCAAAATCCCGAGCTAAGTGAACAGCTTCTCCTTCCACCAGGGAGGTGAGTAACGTG ACATTTGCTGCTTTGCGCCTGCCCGCGGGTAAATTCAAACCGATTTTTTCTAGCCTTTCT CGCAAAGATCTCCCCCCATTTTTCGATTTGGCTCTTCGGAGGACGCCACCGAGGAGAGAC GCGTTCAGGCATTCTGGGGGCGACAGCCGTCTCTGAACTTCCCCCACAGTTACTTTGTAC TTTGAAGTTGAACTGAGCAGAGACAAACGGCCCGGGACCGAGCAAAACACCTCCCCGGTG TTGACGGACATGCCTCCCAGGAAGCCATCTTTATTCATCATCAGAGAAGTCACAGATTTG GGAGGAACTGGAACTTTTTTAATGACAGACTGGTCCAATAGATTCATGCTGCTGTTATTG GCATCTTCAACTGACTGGACGTCTTCCATTCCGGGGTGGCCGAGGCCGTGCAGCGAGAGG CTGTCACCCATGCCCGCGTCCAGGCCGTGGTGCGCTGAGTGCAGGAGCACGTCCGGCCGG CGGACAGAGTGGTAGTCCCTCCGGGGGTCCAGGCCCGAGAGCTGGGGCAGGGCGGCCCGA GGCTGGGGCAGGAGGGAGCCGGCTTCTGAACCCACTTCTTGCCGTTGCCGTTGCCCCCAA GGATGCTGCTGGGGCTGGTGCAGGGGGTTCAGGGAGTAGGGGTCGTTGACGTGGGAGTAG GGGTCCTGGCTCTGGTGGTAGGGGAGCGGCTGGTAGGGGGGCGGGAAGTAGGGCGGCTGG AAATCTGACGACGGGGTGTGGGACAGCGGCGGGGCGCTGGAATAAGGTCCTTGGGACACC GAGCCCAGCTGGGAGAGTCGCGAGCTGTGACTCGGGACGCCATCGTGCCGGTCCTCATAG ATATCTTCGTACTTGACATTCTCCACGAGCTTCCAGAGCATGACGGCAGCCCGGTCTCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTACAAAGTTGCTTGGTGGCCAGCAGCATATTCTTTCGGGAATGCAGGTCGCTGGGGTCC GTGTGCTGCCGGTTCAAATACTCAGAAACAGCTTTGGCGGGAAACTCTGTTTCACAAATG TACCCAAAATCCCGAGCTAAGTGAACAGCTTCTCCTTCCACCAGGGAGGTGAGTAACGTG ACATTTGCTGCTTTGCGCCTGCCCGCGGGTAAATTCAAACCGATTTTTTCTAGCCTTTCT CGCAAAGATCTCCCCCCATTTTTCGATTTGGCTCTTCGGAGGACGCCACCGAGGAGAGAC GCGTTCAGGCATTCTGGGGGCGACAGCCGTCTCTGAACTTCCCCCACAGTTACTTTGTAC TTTGAAGTTGAACTGAGCAGAGACAAACGGCCCGGGACCGAGCAAAACACCTCCCCGGTG TTGACGGACATGCCTCCCAGGAAGCCATCTTTATTCATCATCAGAGAAGTCACAGATTTG GGAGGAACTGGAACTTTTTTAATGACAGACTGGTCCAATAGATTCATGCTGCTGTTATTG GCATCTTCAACTGACTGGACGTCTTCCATTCCGGGGTGGCCGAGGCCGTGCAGCGAGAGG CTGTCACCCATGCCCGCGTCCAGGCCGTGGTGCGCTGAGTGCAGGAGCACGTCCGGCCGG CGGACAGAGTGGTAGTCCCTCCGGGGGTCCAGGCCCGAGAGCTGGGGCAGGGCGGCCCGA GGCTGGGGCAGGAGGGAGCCGGCTTCTGAACCCACTTCTTGCCGTTGCCGTTGCCCCCAA GGATGCTGCTGGGGCTGGTGCAGGGGGTTCAGGGAGTAGGGGTCGTTGACGTGGGAGTAG GGGTCCTGGCTCTGGTGGTAGGGGAGCGGCTGGTAGGGGGGCGGGAAGTAGGGCGGCTGG AAATCTGACGACGGGGTGTGGGACAGCGGCGGGGCGCTGGAATAAGGTCCTTGGGACACC GAGCCCAGCTGGGAGAGTCGCGAGCTGTGACTCGGGACGCCATCGTGCCGGTCCTCATAG ATATCTTCGTACTTGACATTCTCCACGAGCTTCCAGAGCATGACGGCAGCCCGGTCTCTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 12-156, gnl|bosTau2|chr23 (21590506-21590650) | |
| 12-156, gnl|canFam2|chr12 (21568502-21568679) | |
| 12-156, gnl|danRer3|chr20 (54818994-54819171) | |
| 12-156, gnl|dasNov1|scaffold_6983 (39987-40164) | |
| 12-156, gnl|echTel1|scaffold_288431 (4880-5048) | |
| 12-156, gnl|fr1|chrUn (312049656-312049813) | |
| 12-156, gnl|galGal2|chr3 (106110620-106110446) | |
| 12-156, gnl|hg17|chr6 (50915802-50915980) | |
| 12-156, gnl|Hg17|chr6 (50915970-50915826) | |
| 12-156, gnl|loxAfr1|scaffold_6525 (105463-105294) | |
| 12-156, gnl|mm7|chr1 (19421245-19421417) | |
| 12-156, gnl|Mm7|chr1 (19421407-19421263) | |
| 12-156, gnl|monDom2|scaffold_0 (187161945-187161771) | |
| 12-156, gnl|oryCun1|scaffold_205782 (129548-129723) | |
| 12-156, gnl|panTro1|chr5 (51794342-51794520) | |
| 12-156, gnl|rheMac2|chr4 (50540145-50540322) | |
| 12-156, gnl|rn3|chr9 (18072015-18072187) | |
| 12-156, gnl|tetNig1|chrUn_random (137959156-137958994) | |
| 12-156, gnl|xenTro1|scaffold_55 (1166895-1167075) | |
| 274-495, gnl|bosTau2|chr23 (21594422-21594643) | |
| 274-495, gnl|Hg17|chr6 (50911952-50911731) | |
| 274-495, gnl|Mm7|chr1 (19416907-19416686) | |
| 555-1015, gnl|bosTau2|chr23 (21607103-21607563) | |
| 555-1015, gnl|Hg17|chr6 (50899537-50899077) | |
| 555-1015, gnl|Mm7|chr1 (19404661-19404201) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-156, gnl|bosTau2|chr23 (21590506-21590650) | |
| 12-156, gnl|canFam2|chr12 (21568502-21568679) | |
| 12-156, gnl|danRer3|chr20 (54818994-54819171) | |
| 12-156, gnl|dasNov1|scaffold_6983 (39987-40164) | |
| 12-156, gnl|echTel1|scaffold_288431 (4880-5048) | |
| 12-156, gnl|fr1|chrUn (312049656-312049813) | |
| 12-156, gnl|galGal2|chr3 (106110620-106110446) | |
| 12-156, gnl|hg17|chr6 (50915802-50915980) | |
| 12-156, gnl|Hg17|chr6 (50915970-50915826) | |
| 12-156, gnl|loxAfr1|scaffold_6525 (105463-105294) | |
| 12-156, gnl|mm7|chr1 (19421245-19421417) | |
| 12-156, gnl|Mm7|chr1 (19421407-19421263) | |
| 12-156, gnl|monDom2|scaffold_0 (187161945-187161771) | |
| 12-156, gnl|oryCun1|scaffold_205782 (129548-129723) | |
| 12-156, gnl|panTro1|chr5 (51794342-51794520) | |
| 12-156, gnl|rheMac2|chr4 (50540145-50540322) | |
| 12-156, gnl|rn3|chr9 (18072015-18072187) | |
| 12-156, gnl|tetNig1|chrUn_random (137959156-137958994) | |
| 12-156, gnl|xenTro1|scaffold_55 (1166895-1167075) | |
| 274-495, gnl|bosTau2|chr23 (21594422-21594643) | |
| 274-495, gnl|Hg17|chr6 (50911952-50911731) | |
| 274-495, gnl|Mm7|chr1 (19416907-19416686) | |
| 555-1015, gnl|bosTau2|chr23 (21607103-21607563) | |
| 555-1015, gnl|Hg17|chr6 (50899537-50899077) | |
| 555-1015, gnl|Mm7|chr1 (19404661-19404201) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.146735) | |
| pty (0.142714) | |
| sug (0.127291) |