Ss1.1-Ova1-OVR010020H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGCTGAGCGCGGAGCCGCGGCGGGCGCGGGATCCCGGCCGGGGCGCGAGCCGAGCACA GCCTCCCTCTCCAGCCGGGCCGAGCGGGCACTGCGGGCGGAGCGGGGCGAGCGCGCCAGT GGGCGCAGCGGACACAGAGCGCCGGGGCCGCCGCCGGGGGGGGATGCGGCTGCCTCCCCG GGCCGGCGTGTAGAGAGGGCGGGTCCCCGGCCTCGGGAGCGCGGCGGTGGAGGGGACAGA GGCGGCGGCCATGGCGACCCCCGGCAACCTGGGGTCCTCCGTCCTGGCGAGCAAGACCAA GACGAAGAAGAAGCACTTCGTAGCGCAGAAAGTGAAGCTCTTTCGGGCCAGCGATCCGCT GCTCAGCGTCCTGATGTGGGGGGTAAACCACTCGATCAATGAACTGAGCCATGTTCAAAT CCCTGTTATGTTGATGCCAGACGACTTCAAAGCCTATTCAAAAATAAAGGTGGACAATCA CCTTTTTAACAAAGAAAACATGCCGAGCCACTTCAAGTTTAAGGAATACTGCCCGATGGT TTTCCGGAACCTGCGGGAGAGGTTTGGAATCGATGATCAGGATTTCCAGAACTCCCTGAC CAGGAGCGCACCCCTTCCCAATGACTCGCAGGCCCGCAGCGGGGCCCGGTTCCACACGTC CTACGACAGGAGGTACGTCATCAAGACCATCACGAGCGAAGACGTGGCCGAGATGCACAA CATCCTCAAGAAGTACCACCAGTATATAGTGGAATGTCATGGGATCACCCTTCTTCCCCA GTTCCTGGGCATGTACCGGCTCAATGTTGACGGAGTTGAAATATATGTGATTGTCACGAG GAATGTGTTCAGCCACCGTTTATCTGTATATAGGAAGTACGACTTAAAGGGTTCCACAGT GGCCAGGGAAGCTAGTGACAAAGAAAAGGCCAAAGAACTGCCAACTTTAAAGGATAATGA TTTCATTAACGAGGGTCAGAAGATTTATATTGATGACAACAACAAAAAGGTATTCCTGGA AAAACTGAAGAAGGATGTTGAGTTTCTGGCGCAGTTGAAGCTCATGGACTACAGCCTCCT GTTAAAACATAGTATTTTGTTATGAATTATCCCTTTAATTGAAACCCTCAATATTACTGT TTACATTATTAGGAAAACAGGGATTTTTTGAATCTAAAAATTTAATGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGCTGAGCGCGGAGCCGCGGCGGGCGCGGGATCCCGGCCGGGGCGCGAGCCGAGCACA GCCTCCCTCTCCAGCCGGGCCGAGCGGGCACTGCGGGCGGAGCGGGGCGAGCGCGCCAGT GGGCGCAGCGGACACAGAGCGCCGGGGCCGCCGCCGGGGGGGGATGCGGCTGCCTCCCCG GGCCGGCGTGTAGAGAGGGCGGGTCCCCGGCCTCGGGAGCGCGGCGGTGGAGGGGACAGA GGCGGCGGCCATGGCGACCCCCGGCAACCTGGGGTCCTCCGTCCTGGCGAGCAAGACCAA GACGAAGAAGAAGCACTTCGTAGCGCAGAAAGTGAAGCTCTTTCGGGCCAGCGATCCGCT GCTCAGCGTCCTGATGTGGGGGGTAAACCACTCGATCAATGAACTGAGCCATGTTCAAAT CCCTGTTATGTTGATGCCAGACGACTTCAAAGCCTATTCAAAAATAAAGGTGGACAATCA CCTTTTTAACAAAGAAAACATGCCGAGCCACTTCAAGTTTAAGGAATACTGCCCGATGGT TTTCCGGAACCTGCGGGAGAGGTTTGGAATCGATGATCAGGATTTCCAGAACTCCCTGAC CAGGAGCGCACCCCTTCCCAATGACTCGCAGGCCCGCAGCGGGGCCCGGTTCCACACGTC CTACGACAGGAGGTACGTCATCAAGACCATCACGAGCGAAGACGTGGCCGAGATGCACAA CATCCTCAAGAAGTACCACCAGTATATAGTGGAATGTCATGGGATCACCCTTCTTCCCCA GTTCCTGGGCATGTACCGGCTCAATGTTGACGGAGTTGAAATATATGTGATTGTCACGAG GAATGTGTTCAGCCACCGTTTATCTGTATATAGGAAGTACGACTTAAAGGGTTCCACAGT GGCCAGGGAAGCTAGTGACAAAGAAAAGGCCAAAGAACTGCCAACTTTAAAGGATAATGA TTTCATTAACGAGGGTCAGAAGATTTATATTGATGACAACAACAAAAAGGTATTCCTGGA AAAACTGAAGAAGGATGTTGAGTTTCTGGCGCAGTTGAAGCTCATGGACTACAGCCTCCT GTTAAAACATAGTATTTTGTTATGAATTATCCCTTTAATTGAAACCCTCAATATTACTGT TTACATTATTAGGAAAACAGGGATTTTTTGAATCTAAAAATTTAATGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 75 entry(ies) | More info |
| Aligned organism(s): 75 entry(ies) | Help | Less info |
| 1-394, gnl|bosTau2|chr13 (15477456-15477057) | |
| 1-394, gnl|Hg17|chr10 (23043508-23043118) | |
| 1-394, gnl|Mm7|chr2 (19063406-19063011) | |
| 482-589, gnl|bosTau2|chr19 (35826024-35825917) | |
| 482-589, gnl|canFam2|chr9 (26785830-26785665) | |
| 482-589, gnl|danRer3|chr2 (12376861-12376742) | |
| 482-589, gnl|dasNov1|scaffold_187535 (818-661) | |
| 482-589, gnl|echTel1|scaffold_241831 (431-281) | |
| 482-589, gnl|fr1|chrUn (48774292-48774404) | |
| 482-589, gnl|galGal2|chr27 (2550443-2550585) | |
| 482-589, gnl|hg17|chr17 (34194009-34194169) | |
| 482-589, gnl|Hg17|chr17 (34194129-34194022) | |
| 482-589, gnl|loxAfr1|scaffold_1668 (89912-89752) | |
| 482-589, gnl|mm7|chr11 (97838575-97838737) | |
| 482-589, gnl|Mm7|chr11 (97838699-97838593) | |
| 482-589, gnl|monDom2|scaffold_18 (47703127-47703268) | |
| 482-589, gnl|oryCun1|scaffold_163548 (8589-8747) | |
| 482-589, gnl|panTro1|chr19 (37410945-37411105) | |
| 482-589, gnl|rheMac2|chr16 (48813901-48814061) | |
| 482-589, gnl|rn3|chr10 (86489845-86490003) | |
| 482-589, gnl|tetNig1|chr18 (1013265-1013157) | |
| 482-589, gnl|xenTro1|scaffold_334 (649361-649242) | |
| 740-890, gnl|bosTau2|chr13 (15458246-15458096) | |
| 740-890, gnl|canFam2|chr2 (13495519-13495353) | |
| 740-890, gnl|danRer3|chr2 (12385734-12385568) | |
| 740-890, gnl|dasNov1|scaffold_69593 (2247-2415) | |
| 740-890, gnl|echTel1|scaffold_58939 (1284-1115) | |
| 740-890, gnl|fr1|chrUn (48772873-48773028) | |
| 740-890, gnl|galGal2|chr2 (16945025-16944857) | |
| 740-890, gnl|hg17|chr10 (22902229-22902397) | |
| 740-890, gnl|Hg17|chr10 (22902395-22902245) | |
| 740-890, gnl|loxAfr1|scaffold_1352 (44422-44253) | |
| 740-890, gnl|mm7|chr2 (18937426-18937594) | |
| 740-890, gnl|Mm7|chr2 (18937592-18937442) | |
| 740-890, gnl|monDom2|scaffold_7 (46272914-46272746) | |
| 740-890, gnl|oryCun1|scaffold_214969 (149368-149200) | |
| 740-890, gnl|panTro1|chr8 (23102466-23102634) | |
| 740-890, gnl|rheMac2|chr9 (22769662-22769830) | |
| 740-890, gnl|rn3|chr17_random (556207-556375) | |
| 740-890, gnl|tetNig1|chr18 (1013725-1013570) | |
| 740-890, gnl|xenTro1|scaffold_42 (2493448-2493280) | |
| 927-1042, gnl|bosTau2|chr13 (15433339-15433224) | |
| 927-1042, gnl|canFam2|chr2 (13515176-13515051) | |
| 927-1042, gnl|danRer3|chr2 (12399378-12399261) | |
| 927-1042, gnl|dasNov1|scaffold_33472 (41644-41519) | |
| 927-1042, gnl|echTel1|scaffold_313159 (41224-41099) | |
| 927-1042, gnl|fr1|chrUn (48766479-48766597) | |
| 927-1042, gnl|galGal2|chr2 (16956804-16956683) | |
| 927-1042, gnl|hg17|chr10 (22879585-22879710) | |
| 927-1042, gnl|Hg17|chr10 (22879709-22879594) | |
| 927-1042, gnl|loxAfr1|scaffold_1352 (68854-68729) | |
| 927-1042, gnl|mm7|chr2 (18917963-18918088) | |
| 927-1042, gnl|Mm7|chr2 (18918087-18917972) | |
| 927-1042, gnl|monDom2|scaffold_7 (46291880-46291755) | |
| 927-1042, gnl|oryCun1|scaffold_214969 (168569-168444) | |
| 927-1042, gnl|panTro1|chr8 (23079786-23079911) | |
| 927-1042, gnl|rheMac2|chr9 (22748641-22748766) | |
| 927-1042, gnl|rn3|chr17 (92972049-92972174) | |
| 927-1042, gnl|tetNig1|chr18 (1014247-1014122) | |
| 927-1042, gnl|xenTro1|scaffold_42 (2499531-2499406) | |
| 1076-1188, gnl|bosTau2|chr13 (15420550-15420437) | |
| 1076-1188, gnl|canFam2|chr2 (13531301-13530305) | |
| 1076-1188, gnl|dasNov1|scaffold_30728 (6091-5163) | |
| 1076-1188, gnl|echTel1|scaffold_313159 (77893-76910) | |
| 1076-1188, gnl|galGal2|chr2 (16964713-16963753) | |
| 1076-1188, gnl|hg17|chr10 (22864366-22865333) | |
| 1076-1188, gnl|Hg17|chr10 (22865150-22864988) | |
| 1076-1188, gnl|loxAfr1|scaffold_200593 (1360-380) | |
| 1076-1188, gnl|mm7|chr2 (18907846-18908804) | |
| 1076-1188, gnl|Mm7|chr2 (18908583-18908470) | |
| 1076-1188, gnl|monDom2|scaffold_7 (46310633-46309631) | |
| 1076-1188, gnl|oryCun1|scaffold_214969 (181621-180689) | |
| 1076-1188, gnl|panTro1|chr8 (23064524-23065497) | |
| 1076-1188, gnl|rheMac2|chr9 (22734433-22735379) | |
| 1076-1188, gnl|rn3|chr17 (92961802-92962772) |
| Aligned organism(s): 75 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-394, gnl|bosTau2|chr13 (15477456-15477057) | |
| 1-394, gnl|Hg17|chr10 (23043508-23043118) | |
| 1-394, gnl|Mm7|chr2 (19063406-19063011) | |
| 482-589, gnl|bosTau2|chr19 (35826024-35825917) | |
| 482-589, gnl|canFam2|chr9 (26785830-26785665) | |
| 482-589, gnl|danRer3|chr2 (12376861-12376742) | |
| 482-589, gnl|dasNov1|scaffold_187535 (818-661) | |
| 482-589, gnl|echTel1|scaffold_241831 (431-281) | |
| 482-589, gnl|fr1|chrUn (48774292-48774404) | |
| 482-589, gnl|galGal2|chr27 (2550443-2550585) | |
| 482-589, gnl|hg17|chr17 (34194009-34194169) | |
| 482-589, gnl|Hg17|chr17 (34194129-34194022) | |
| 482-589, gnl|loxAfr1|scaffold_1668 (89912-89752) | |
| 482-589, gnl|mm7|chr11 (97838575-97838737) | |
| 482-589, gnl|Mm7|chr11 (97838699-97838593) | |
| 482-589, gnl|monDom2|scaffold_18 (47703127-47703268) | |
| 482-589, gnl|oryCun1|scaffold_163548 (8589-8747) | |
| 482-589, gnl|panTro1|chr19 (37410945-37411105) | |
| 482-589, gnl|rheMac2|chr16 (48813901-48814061) | |
| 482-589, gnl|rn3|chr10 (86489845-86490003) | |
| 482-589, gnl|tetNig1|chr18 (1013265-1013157) | |
| 482-589, gnl|xenTro1|scaffold_334 (649361-649242) | |
| 740-890, gnl|bosTau2|chr13 (15458246-15458096) | |
| 740-890, gnl|canFam2|chr2 (13495519-13495353) | |
| 740-890, gnl|danRer3|chr2 (12385734-12385568) | |
| 740-890, gnl|dasNov1|scaffold_69593 (2247-2415) | |
| 740-890, gnl|echTel1|scaffold_58939 (1284-1115) | |
| 740-890, gnl|fr1|chrUn (48772873-48773028) | |
| 740-890, gnl|galGal2|chr2 (16945025-16944857) | |
| 740-890, gnl|hg17|chr10 (22902229-22902397) | |
| 740-890, gnl|Hg17|chr10 (22902395-22902245) | |
| 740-890, gnl|loxAfr1|scaffold_1352 (44422-44253) | |
| 740-890, gnl|mm7|chr2 (18937426-18937594) | |
| 740-890, gnl|Mm7|chr2 (18937592-18937442) | |
| 740-890, gnl|monDom2|scaffold_7 (46272914-46272746) | |
| 740-890, gnl|oryCun1|scaffold_214969 (149368-149200) | |
| 740-890, gnl|panTro1|chr8 (23102466-23102634) | |
| 740-890, gnl|rheMac2|chr9 (22769662-22769830) | |
| 740-890, gnl|rn3|chr17_random (556207-556375) | |
| 740-890, gnl|tetNig1|chr18 (1013725-1013570) | |
| 740-890, gnl|xenTro1|scaffold_42 (2493448-2493280) | |
| 927-1042, gnl|bosTau2|chr13 (15433339-15433224) | |
| 927-1042, gnl|canFam2|chr2 (13515176-13515051) | |
| 927-1042, gnl|danRer3|chr2 (12399378-12399261) | |
| 927-1042, gnl|dasNov1|scaffold_33472 (41644-41519) | |
| 927-1042, gnl|echTel1|scaffold_313159 (41224-41099) | |
| 927-1042, gnl|fr1|chrUn (48766479-48766597) | |
| 927-1042, gnl|galGal2|chr2 (16956804-16956683) | |
| 927-1042, gnl|hg17|chr10 (22879585-22879710) | |
| 927-1042, gnl|Hg17|chr10 (22879709-22879594) | |
| 927-1042, gnl|loxAfr1|scaffold_1352 (68854-68729) | |
| 927-1042, gnl|mm7|chr2 (18917963-18918088) | |
| 927-1042, gnl|Mm7|chr2 (18918087-18917972) | |
| 927-1042, gnl|monDom2|scaffold_7 (46291880-46291755) | |
| 927-1042, gnl|oryCun1|scaffold_214969 (168569-168444) | |
| 927-1042, gnl|panTro1|chr8 (23079786-23079911) | |
| 927-1042, gnl|rheMac2|chr9 (22748641-22748766) | |
| 927-1042, gnl|rn3|chr17 (92972049-92972174) | |
| 927-1042, gnl|tetNig1|chr18 (1014247-1014122) | |
| 927-1042, gnl|xenTro1|scaffold_42 (2499531-2499406) | |
| 1076-1188, gnl|bosTau2|chr13 (15420550-15420437) | |
| 1076-1188, gnl|canFam2|chr2 (13531301-13530305) | |
| 1076-1188, gnl|dasNov1|scaffold_30728 (6091-5163) | |
| 1076-1188, gnl|echTel1|scaffold_313159 (77893-76910) | |
| 1076-1188, gnl|galGal2|chr2 (16964713-16963753) | |
| 1076-1188, gnl|hg17|chr10 (22864366-22865333) | |
| 1076-1188, gnl|Hg17|chr10 (22865150-22864988) | |
| 1076-1188, gnl|loxAfr1|scaffold_200593 (1360-380) | |
| 1076-1188, gnl|mm7|chr2 (18907846-18908804) | |
| 1076-1188, gnl|Mm7|chr2 (18908583-18908470) | |
| 1076-1188, gnl|monDom2|scaffold_7 (46310633-46309631) | |
| 1076-1188, gnl|oryCun1|scaffold_214969 (181621-180689) | |
| 1076-1188, gnl|panTro1|chr8 (23064524-23065497) | |
| 1076-1188, gnl|rheMac2|chr9 (22734433-22735379) | |
| 1076-1188, gnl|rn3|chr17 (92961802-92962772) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |