Ss1.1-Ova1-OVR010026D10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGAGGGGCCGAGGCGCCGCCTCTGCCTCCCCGGGTCCCGGCGCGGCGCGCGGGGCGTCT CGTCGCGGGCTCGTGCGCGGGGCCTCGCTTCACAGGGCGTGGTTTCCCCTCACGTCAGAG CTTCTGAAGGAACAGGTGACAGACCATGAGCGATTCCGAAGACGAGGGCACCCCCCAGCT TTCTTCCCACGCCCTAGCAGCCCTGCAGGAATTTTATGCTGAGCAGAGGCAGCGCGCTGA CTCCGGTGCCCACGACAAGTACGACCTTGGCGTCATAGAGGAGAACTGGCAGCTGAGCCA GTTCTGGTATAATCAGGAGACAGCCCTGCGCCTGGCAGAGGAAGCTGTGGCAGCGGCAGG GGACGGTGGCAGAATCGCCTGCGTGAGCGCCCCCAGCGTTTACCGGACGCTGCGGCGGCT GCACAGAGCCCGCTGCTCGGCCTGCCTCTTCGAGCACGACCGCAGGTTCGCCGGCCTCGG GGAGGAGTTCGTCTTCTACGATTACCGCAGGCCGCTGGACTTCCCGCCGGGGGTCGAGGC CCACAGCTTCGACCTGGTCATCGCGGACCCCCCCTACCTGTCCCAGGAGTGTCTCCGCAA AACGGCCCAAACCATCCAGTACCTGACCCGGGGCAAGATCCTGCTGTGCACAGGTGCCGT CATGGAGGAAGAGGCAGCAAAGCTCCTTGGGGTGAAGATGTGCAAATTCATTCCAGAACA CACGCGAACCTTGGGAAACGAGTTTCGCTGTTACGTGAATTATGCTTCTGGGCTGGACCG CGAACTGTGAGTGCGTGGTCCCCCCGGGTGCAGTCAGGGACCCGGGTGCCACTCCCCTCT CTCTGTTCTCTTAGTAGATTGAGAAGCTGGGGCCACCACAACAAACGGGGGCTCTCCCAC CCCGATTTTTGGGGTAATGAAGATAACATCTCAGTGTGATTTCCTTCGTGACGTTCCTGG CTTTTGATCACTTAGATCTGTGCAATAGGAGTTCCCTGGGAGCTCAGCAGGTTAAGGATC CAGTGTTGTCACTGCTGTGGTACAGGTTCGATCCCTGGCCTGGGAACCTCTGTATGCTGT GGATGTGAGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGAGGGGCCGAGGCGCCGCCTCTGCCTCCCCGGGTCCCGGCGCGGCGCGCGGGGCGTCT CGTCGCGGGCTCGTGCGCGGGGCCTCGCTTCACAGGGCGTGGTTTCCCCTCACGTCAGAG CTTCTGAAGGAACAGGTGACAGACCATGAGCGATTCCGAAGACGAGGGCACCCCCCAGCT TTCTTCCCACGCCCTAGCAGCCCTGCAGGAATTTTATGCTGAGCAGAGGCAGCGCGCTGA CTCCGGTGCCCACGACAAGTACGACCTTGGCGTCATAGAGGAGAACTGGCAGCTGAGCCA GTTCTGGTATAATCAGGAGACAGCCCTGCGCCTGGCAGAGGAAGCTGTGGCAGCGGCAGG GGACGGTGGCAGAATCGCCTGCGTGAGCGCCCCCAGCGTTTACCGGACGCTGCGGCGGCT GCACAGAGCCCGCTGCTCGGCCTGCCTCTTCGAGCACGACCGCAGGTTCGCCGGCCTCGG GGAGGAGTTCGTCTTCTACGATTACCGCAGGCCGCTGGACTTCCCGCCGGGGGTCGAGGC CCACAGCTTCGACCTGGTCATCGCGGACCCCCCCTACCTGTCCCAGGAGTGTCTCCGCAA AACGGCCCAAACCATCCAGTACCTGACCCGGGGCAAGATCCTGCTGTGCACAGGTGCCGT CATGGAGGAAGAGGCAGCAAAGCTCCTTGGGGTGAAGATGTGCAAATTCATTCCAGAACA CACGCGAACCTTGGGAAACGAGTTTCGCTGTTACGTGAATTATGCTTCTGGGCTGGACCG CGAACTGTGAGTGCGTGGTCCCCCCGGGTGCAGTCAGGGACCCGGGTGCCACTCCCCTCT CTCTGTTCTCTTAGTAGATTGAGAAGCTGGGGCCACCACAACAAACGGGGGCTCTCCCAC CCCGATTTTTGGGGTAATGAAGATAACATCTCAGTGTGATTTCCTTCGTGACGTTCCTGG CTTTTGATCACTTAGATCTGTGCAATAGGAGTTCCCTGGGAGCTCAGCAGGTTAAGGATC CAGTGTTGTCACTGCTGTGGTACAGGTTCGATCCCTGGCCTGGGAACCTCTGTATGCTGT GGATGTGAGCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 146-289, gnl|bosTau2|chr12 (19839204-19839350) | |
| 146-289, gnl|Hg17|chr13 (20229737-20229594) | |
| 146-289, gnl|Mm7|chr14 (52433986-52433843) | |
| 370-655, gnl|bosTau2|chr12 (19845329-19845614) | |
| 370-655, gnl|canFam2|chr25 (20364082-20363771) | |
| 370-655, gnl|danRer3|chr18 (36165801-36165471) | |
| 370-655, gnl|echTel1|scaffold_305837 (3460-3149) | |
| 370-655, gnl|fr1|chrUn (250064324-250064633) | |
| 370-655, gnl|galGal2|chr1 (170766004-170765708) | |
| 370-655, gnl|hg17|chr13 (20203968-20204280) | |
| 370-655, gnl|Hg17|chr13 (20204263-20203978) | |
| 370-655, gnl|loxAfr1|scaffold_58997 (12443-12747) | |
| 370-655, gnl|mm7|chr14 (52418272-52418576) | |
| 370-655, gnl|Mm7|chr14 (52418566-52418281) | |
| 370-655, gnl|monDom2|scaffold_15 (28562807-28563116) | |
| 370-655, gnl|oryCun1|scaffold_213538 (94958-95270) | |
| 370-655, gnl|panTro1|chr14 (19372017-19372329) | |
| 370-655, gnl|rheMac2|chr17 (858907-858595) | |
| 370-655, gnl|rn3|chr15 (36605762-36606061) | |
| 370-655, gnl|tetNig1|chr2 (17677972-17677654) | |
| 370-655, gnl|xenTro1|scaffold_327 (1087784-1088091) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 146-289, gnl|bosTau2|chr12 (19839204-19839350) | |
| 146-289, gnl|Hg17|chr13 (20229737-20229594) | |
| 146-289, gnl|Mm7|chr14 (52433986-52433843) | |
| 370-655, gnl|bosTau2|chr12 (19845329-19845614) | |
| 370-655, gnl|canFam2|chr25 (20364082-20363771) | |
| 370-655, gnl|danRer3|chr18 (36165801-36165471) | |
| 370-655, gnl|echTel1|scaffold_305837 (3460-3149) | |
| 370-655, gnl|fr1|chrUn (250064324-250064633) | |
| 370-655, gnl|galGal2|chr1 (170766004-170765708) | |
| 370-655, gnl|hg17|chr13 (20203968-20204280) | |
| 370-655, gnl|Hg17|chr13 (20204263-20203978) | |
| 370-655, gnl|loxAfr1|scaffold_58997 (12443-12747) | |
| 370-655, gnl|mm7|chr14 (52418272-52418576) | |
| 370-655, gnl|Mm7|chr14 (52418566-52418281) | |
| 370-655, gnl|monDom2|scaffold_15 (28562807-28563116) | |
| 370-655, gnl|oryCun1|scaffold_213538 (94958-95270) | |
| 370-655, gnl|panTro1|chr14 (19372017-19372329) | |
| 370-655, gnl|rheMac2|chr17 (858907-858595) | |
| 370-655, gnl|rn3|chr15 (36605762-36606061) | |
| 370-655, gnl|tetNig1|chr2 (17677972-17677654) | |
| 370-655, gnl|xenTro1|scaffold_327 (1087784-1088091) |
| Expressed library(ies): 22 entry(ies) | More info |
| Expressed library(ies): 22 entry(ies) | Help | Less info |
| elu (0.385356) | |
| ecc (0.345105) | |
| ese (0.253004) | |
| nms (0.213858) | |
| fcc (0.197785) | |
| fty (0.17584) | |
| fbs (0.175346) | |
| mcp (0.170648) | |
| nje (0.16592) | |
| nco (0.161734) | |
| cag (0.151194) | |
| lnt (0.142308) | |
| hlv (0.139256) | |
| nca (0.136874) | |
| che (0.136314) | |
| ute (0.132784) | |
| cov (0.132153) | |
| eru (0.120048) | |
| med (0.116252) | |
| jca (0.11396) | |
| jej (0.0989218) | |
| eje (0.0988338) |
| Expressed library(ies): 22 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| ecc (0.345105) | |
| ese (0.253004) | |
| nms (0.213858) | |
| fcc (0.197785) | |
| fty (0.17584) | |
| fbs (0.175346) | |
| mcp (0.170648) | |
| nje (0.16592) | |
| nco (0.161734) | |
| cag (0.151194) | |
| lnt (0.142308) | |
| hlv (0.139256) | |
| nca (0.136874) | |
| che (0.136314) | |
| ute (0.132784) | |
| cov (0.132153) | |
| eru (0.120048) | |
| med (0.116252) | |
| jca (0.11396) | |
| jej (0.0989218) | |
| eje (0.0988338) |