Non-Coding RNA Search

Ss1.1-Ova1-OVR010026G08.5

Sequence:


               
               ATACCACCACCGCCCAGCAGCCTCCCGGGCAAGAAGCACTCCCGGCCTCCCTGCCAGCTG
AGCAGTCCCCAGAACCTCCTGTACCCAAGGAGACCGAGGCCAGTGCACCCCCCCGGGAGC
CTGAGAGCCCCACCGGCCTCACCCCCAAACCTGCAGGCCTACCTGACCCCTCGGCCTAGG
GGAAGGCACACAGACTCGGACTTTCACCGCCGGCCCCCCGCGCCCGGGACTGGACCCGCC
TGGCCCCCAACTTGGTGCTCTGGTCTGGCCGGTGCGCGCGTCCTCTTCTTCCCGTCTGGC
TGCAACCCGGACCCCAGCCCTGCTCTGAGCCTGAGCGGCGCTGCACAAGCCCTGCCGGCC
CAGGCCCTCAAGCTAGTGCCAGCTCCGCAGTCTTCCTGTCCGGGTGGGGCCCCGGGGAGG
GTGGCGGCAGACATGCCCAGTTTGGTGCTTCCCTGGCTGCTGCTTCCCTTAGGTCCTAGG
GCCTGAGAGGGAGGACCTCTGCCTCCTGAGGGAGGGACGTTTTTGTCCAGCAGGGCCCCA
GGGGTTTGGACTCCAGTGTCGCCTGCTAGGTGGGGTCTGGACACCCCCACTCTGGGTTGG
GGGCATGAGGAGGGGGCCCGCGGTGATCTCCAAGCCCTGCCCCACAGCCATTCATTGCCG
GGAAGCGCCCAGCGCCTGTGCTCAAGCTCCTCCGTGTTTTAATAAACGGCCACGACTTTT
TGAAATACTTGGTAGTGTCGCCTCTTGGGGCACGAGTCCCTGGGACTGCTCCTCTCAGGG
GCAGGGCTGGCGCCAGGCCAGGGCCCATTTTGCCTTTCCGCTTAGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACCACCACCGCCCAGCAGCCTCCCGGGCAAGAAGCACTCCCGGCCTCCCTGCCAGCTG
AGCAGTCCCCAGAACCTCCTGTACCCAAGGAGACCGAGGCCAGTGCACCCCCCCGGGAGC
CTGAGAGCCCCACCGGCCTCACCCCCAAACCTGCAGGCCTACCTGACCCCTCGGCCTAGG
GGAAGGCACACAGACTCGGACTTTCACCGCCGGCCCCCCGCGCCCGGGACTGGACCCGCC
TGGCCCCCAACTTGGTGCTCTGGTCTGGCCGGTGCGCGCGTCCTCTTCTTCCCGTCTGGC
TGCAACCCGGACCCCAGCCCTGCTCTGAGCCTGAGCGGCGCTGCACAAGCCCTGCCGGCC
CAGGCCCTCAAGCTAGTGCCAGCTCCGCAGTCTTCCTGTCCGGGTGGGGCCCCGGGGAGG
GTGGCGGCAGACATGCCCAGTTTGGTGCTTCCCTGGCTGCTGCTTCCCTTAGGTCCTAGG
GCCTGAGAGGGAGGACCTCTGCCTCCTGAGGGAGGGACGTTTTTGTCCAGCAGGGCCCCA
GGGGTTTGGACTCCAGTGTCGCCTGCTAGGTGGGGTCTGGACACCCCCACTCTGGGTTGG
GGGCATGAGGAGGGGGCCCGCGGTGATCTCCAAGCCCTGCCCCACAGCCATTCATTGCCG
GGAAGCGCCCAGCGCCTGTGCTCAAGCTCCTCCGTGTTTTAATAAACGGCCACGACTTTT
TGAAATACTTGGTAGTGTCGCCTCTTGGGGCACGAGTCCCTGGGACTGCTCCTCTCAGGG
GCAGGGCTGGCGCCAGGCCAGGGCCCATTTTGCCTTTCCGCTTAGAGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               218-512, gnl|bosTau2|chr7 (18005178-18004875)
               

               
               218-512, gnl|Hg17|chr19 (2304230-2304690)
               


               
               659-828, gnl|bosTau2|chr7 (18004822-18004648)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               218-512, gnl|bosTau2|chr7 (18005178-18004875)
               

               
               218-512, gnl|Hg17|chr19 (2304230-2304690)
               


               
               659-828, gnl|bosTau2|chr7 (18004822-18004648)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nje (0.16592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	218-512, gnl\|bosTau2\|chr7 (18005178-18004875)
	218-512, gnl\|Hg17\|chr19 (2304230-2304690)

	659-828, gnl\|bosTau2\|chr7 (18004822-18004648)