Ss1.1-Ova1-OVR010028F04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACATAAGCTGGGTGTTTTTGTTTTTGTTTTTTGCCATTTGCAGAGTCAACGATTGCAAGA AAGTTTGAAGAAAGTGGATCACATCAAAATTTTGGTGGAAGATGAGCTTAGTTCTCCAGT GGTGGTATTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCAGGTCCTAACGTCGTCCC TGCGCCCAGCGTGGCCCCTTCGGCAGTCGGCCGGGAGAGGCACTCCTGTGACGCTCTGAA CCGCTGGCTGGGAGAGCAGTTGAAGCAGCTGGTGCCTGCGAGCGGCCTCACAGTCATGGA CCTGGAGGTCGAGGGCACATGCGTGCGGTTCAGCCCTCTGATGACAGCGGCAGCTTTAGG CACCCGGGCAGAGGACATGGACCAGCTGGTGGCCTGCATCCACGGCAAGCTGCCGCTCCT GACCTGTACGCTGCAGCTGCGAGAGGAGTTCAAGCAGGAGGTGGCGGGCACGGCGGGCCT CTTATACGTTGATGACCCCAACTGGCCGGGAATAGGGGTAGTCAGGTATGAACACGCGAA TGATGATAAGAACAGTTTGAAATTAGATCCAGAAGGGGAGAAAATCCATGCTGGACTCCT GAAAAAGCTCAATGAACTGGAATCTGACCTTACATTTAAAATGGGCCCCGAGTATAAGAG CATGAAGAGCTGCATTTACATCGGCATGGCCAGCGACGACGTGGACGTTTCTGAGCTAGT GGAGACCATCGCCGCCACAGCCCGAGAAATCGAGGAAAACTCGAGGCTTCTGGAAAACAT GACTGAAGTGGTTCGGAAGGGAATTCAGGAAGCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACATAAGCTGGGTGTTTTTGTTTTTGTTTTTTGCCATTTGCAGAGTCAACGATTGCAAGA AAGTTTGAAGAAAGTGGATCACATCAAAATTTTGGTGGAAGATGAGCTTAGTTCTCCAGT GGTGGTATTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCAGGTCCTAACGTCGTCCC TGCGCCCAGCGTGGCCCCTTCGGCAGTCGGCCGGGAGAGGCACTCCTGTGACGCTCTGAA CCGCTGGCTGGGAGAGCAGTTGAAGCAGCTGGTGCCTGCGAGCGGCCTCACAGTCATGGA CCTGGAGGTCGAGGGCACATGCGTGCGGTTCAGCCCTCTGATGACAGCGGCAGCTTTAGG CACCCGGGCAGAGGACATGGACCAGCTGGTGGCCTGCATCCACGGCAAGCTGCCGCTCCT GACCTGTACGCTGCAGCTGCGAGAGGAGTTCAAGCAGGAGGTGGCGGGCACGGCGGGCCT CTTATACGTTGATGACCCCAACTGGCCGGGAATAGGGGTAGTCAGGTATGAACACGCGAA TGATGATAAGAACAGTTTGAAATTAGATCCAGAAGGGGAGAAAATCCATGCTGGACTCCT GAAAAAGCTCAATGAACTGGAATCTGACCTTACATTTAAAATGGGCCCCGAGTATAAGAG CATGAAGAGCTGCATTTACATCGGCATGGCCAGCGACGACGTGGACGTTTCTGAGCTAGT GGAGACCATCGCCGCCACAGCCCGAGAAATCGAGGAAAACTCGAGGCTTCTGGAAAACAT GACTGAAGTGGTTCGGAAGGGAATTCAGGAAGCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 155-260, gnl|bosTau2|chr25 (14400526-14400631) | |
| 155-260, gnl|canFam2|chr6 (31485283-31485466) | |
| 155-260, gnl|dasNov1|scaffold_22690 (3780-3969) | |
| 155-260, gnl|echTel1|scaffold_310228 (1983-1810) | |
| 155-260, gnl|galGal2|chr14 (2268385-2268573) | |
| 155-260, gnl|hg17|chr16 (15030171-15030359) | |
| 155-260, gnl|Hg17|chr16 (15030232-15030354) | |
| 155-260, gnl|mm7|chr16 (13391987-13391809) | |
| 155-260, gnl|Mm7|chr16 (13391935-13391834) | |
| 155-260, gnl|oryCun1|scaffold_175119 (46515-46343) | |
| 155-260, gnl|panTro1|chr18 (15430140-15430328) | |
| 155-260, gnl|rheMac2|chr20 (14982060-14981875) | |
| 155-260, gnl|rn3|chr10 (1578821-1578643) | |
| 351-530, gnl|bosTau2|chr25 (14403872-14404051) | |
| 351-530, gnl|canFam2|chr6 (31487878-31488098) | |
| 351-530, gnl|danRer3|chr3 (32283799-32283608) | |
| 351-530, gnl|dasNov1|scaffold_22690 (7121-7346) | |
| 351-530, gnl|echTel1|scaffold_111487 (646-425) | |
| 351-530, gnl|galGal2|chr14 (2270468-2270656) | |
| 351-530, gnl|hg17|chr16 (15033078-15033296) | |
| 351-530, gnl|Hg17|chr16 (15033090-15033269) | |
| 351-530, gnl|loxAfr1|scaffold_19675 (48685-48897) | |
| 351-530, gnl|mm7|chr16 (13386985-13386765) | |
| 351-530, gnl|Mm7|chr16 (13386969-13386792) | |
| 351-530, gnl|monDom2|scaffold_17 (27999815-28000040) | |
| 351-530, gnl|oryCun1|scaffold_175119 (43962-43744) | |
| 351-530, gnl|panTro1|chr18 (15433034-15433252) | |
| 351-530, gnl|rheMac2|chr20 (14979176-14978958) | |
| 351-530, gnl|rn3|chr10 (1557495-1557276) | |
| 644-775, gnl|bosTau2|chr25 (14405027-14405157) | |
| 644-775, gnl|canFam2|chr6 (31489122-31489270) | |
| 644-775, gnl|danRer3|chr3 (32282316-32282176) | |
| 644-775, gnl|dasNov1|scaffold_22690 (8231-8377) | |
| 644-775, gnl|echTel1|scaffold_305916 (11500-11355) | |
| 644-775, gnl|galGal2|chr14 (2272193-2272338) | |
| 644-775, gnl|hg17|chr16 (15034615-15034760) | |
| 644-775, gnl|Hg17|chr16 (15034635-15034765) | |
| 644-775, gnl|loxAfr1|scaffold_19675 (49913-50061) | |
| 644-775, gnl|mm7|chr16 (13385884-13385739) | |
| 644-775, gnl|Mm7|chr16 (13385862-13385732) | |
| 644-775, gnl|monDom2|scaffold_17 (28000984-28001123) | |
| 644-775, gnl|oryCun1|scaffold_175119 (42183-42043) | |
| 644-775, gnl|panTro1|chr18 (15434592-15434737) | |
| 644-775, gnl|rheMac2|chr20 (14977601-14977456) | |
| 644-775, gnl|rn3|chr10 (1556364-1556219) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 155-260, gnl|bosTau2|chr25 (14400526-14400631) | |
| 155-260, gnl|canFam2|chr6 (31485283-31485466) | |
| 155-260, gnl|dasNov1|scaffold_22690 (3780-3969) | |
| 155-260, gnl|echTel1|scaffold_310228 (1983-1810) | |
| 155-260, gnl|galGal2|chr14 (2268385-2268573) | |
| 155-260, gnl|hg17|chr16 (15030171-15030359) | |
| 155-260, gnl|Hg17|chr16 (15030232-15030354) | |
| 155-260, gnl|mm7|chr16 (13391987-13391809) | |
| 155-260, gnl|Mm7|chr16 (13391935-13391834) | |
| 155-260, gnl|oryCun1|scaffold_175119 (46515-46343) | |
| 155-260, gnl|panTro1|chr18 (15430140-15430328) | |
| 155-260, gnl|rheMac2|chr20 (14982060-14981875) | |
| 155-260, gnl|rn3|chr10 (1578821-1578643) | |
| 351-530, gnl|bosTau2|chr25 (14403872-14404051) | |
| 351-530, gnl|canFam2|chr6 (31487878-31488098) | |
| 351-530, gnl|danRer3|chr3 (32283799-32283608) | |
| 351-530, gnl|dasNov1|scaffold_22690 (7121-7346) | |
| 351-530, gnl|echTel1|scaffold_111487 (646-425) | |
| 351-530, gnl|galGal2|chr14 (2270468-2270656) | |
| 351-530, gnl|hg17|chr16 (15033078-15033296) | |
| 351-530, gnl|Hg17|chr16 (15033090-15033269) | |
| 351-530, gnl|loxAfr1|scaffold_19675 (48685-48897) | |
| 351-530, gnl|mm7|chr16 (13386985-13386765) | |
| 351-530, gnl|Mm7|chr16 (13386969-13386792) | |
| 351-530, gnl|monDom2|scaffold_17 (27999815-28000040) | |
| 351-530, gnl|oryCun1|scaffold_175119 (43962-43744) | |
| 351-530, gnl|panTro1|chr18 (15433034-15433252) | |
| 351-530, gnl|rheMac2|chr20 (14979176-14978958) | |
| 351-530, gnl|rn3|chr10 (1557495-1557276) | |
| 644-775, gnl|bosTau2|chr25 (14405027-14405157) | |
| 644-775, gnl|canFam2|chr6 (31489122-31489270) | |
| 644-775, gnl|danRer3|chr3 (32282316-32282176) | |
| 644-775, gnl|dasNov1|scaffold_22690 (8231-8377) | |
| 644-775, gnl|echTel1|scaffold_305916 (11500-11355) | |
| 644-775, gnl|galGal2|chr14 (2272193-2272338) | |
| 644-775, gnl|hg17|chr16 (15034615-15034760) | |
| 644-775, gnl|Hg17|chr16 (15034635-15034765) | |
| 644-775, gnl|loxAfr1|scaffold_19675 (49913-50061) | |
| 644-775, gnl|mm7|chr16 (13385884-13385739) | |
| 644-775, gnl|Mm7|chr16 (13385862-13385732) | |
| 644-775, gnl|monDom2|scaffold_17 (28000984-28001123) | |
| 644-775, gnl|oryCun1|scaffold_175119 (42183-42043) | |
| 644-775, gnl|panTro1|chr18 (15434592-15434737) | |
| 644-775, gnl|rheMac2|chr20 (14977601-14977456) | |
| 644-775, gnl|rn3|chr10 (1556364-1556219) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |