Ss1.1-Ova1-OVR010031C06.5
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CTTTGAAGGAAAGGCATTAATCATAAGGAAGCAAGAATGGTCAAAATCGAATGCTGCATT
TTTATAAACAAAATTACAGACTGTCTAAAATTGCTGAAGAATGAACTAATAATAGCATTA
ATAACCAAACACAATGGTGATTATTACAGAACAGTGTATCACATTTTAGTCCAGAGATAG
ACTAAAGTTGAATAACCTTGATGTACACAAAACTGTTTTGGTAGTTGGATTTCATTATCT
TAGTGACTGTAGTCATTTTGCAATACGTTTGTATTTGGCCATTTCCTGTAATCACATTTT
TATATCTCTACAATGACACTTTTTGCAGTTGTGGGGTAGTGTGTAACACTGTCCATCTTG
CATCATTGAAACTACTACAGTGATACTATCATTTAATAATATTAATACTACTTGAAATAG
ACTAAGATAAAGAAAAGGGGTCTATATGATGTGCAGTTTTGTGCCTTTATGTATTTGCCT
TGTTCTTTGTTGAATGTGTGAAATTCTGTACTGTGGTTTTTCCTATAATAGAGAGTAGAG
CTGTGTATTGAATTAGACTATGCCCTTCTGATATCTTTACACTACTGAGAATAGCGTGGT
GTTGGCCATGTAAACCAATTTTCAAAGTTCTAATGATATGCCATGTGTTTGAGGGTTTTA
ACATTTCATTTTAACATTTCAGTATCACCATACACTAATGAATACTCCTGTGATAGATAA
GCCGTCGTTAAATAACTCCGAAAGAAAGGGCCATTGCTTGCGTTACTTTGAATTTAATGT
TGCTCTTGTGCACTGTATAAATATTGTTTGTGATGGATTAGACATTGTGACTTTTGCCTT
TTCAGAAGAAAAAAAAAAAGATAGGACAAAGTATTTGAAGCTCTTAAAATGTACATATTT
TGGTTCTTCTATCTCAAATTATTTAAAATGCATAATTCACATTTTTGGTAATAATTCTAT
GCAATTTTGTGGCATGATGTTTCTTCCACTTGTAATTTTATGTGCTTT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTTTGAAGGAAAGGCATTAATCATAAGGAAGCAAGAATGGTCAAAATCGAATGCTGCATT
TTTATAAACAAAATTACAGACTGTCTAAAATTGCTGAAGAATGAACTAATAATAGCATTA
ATAACCAAACACAATGGTGATTATTACAGAACAGTGTATCACATTTTAGTCCAGAGATAG
ACTAAAGTTGAATAACCTTGATGTACACAAAACTGTTTTGGTAGTTGGATTTCATTATCT
TAGTGACTGTAGTCATTTTGCAATACGTTTGTATTTGGCCATTTCCTGTAATCACATTTT
TATATCTCTACAATGACACTTTTTGCAGTTGTGGGGTAGTGTGTAACACTGTCCATCTTG
CATCATTGAAACTACTACAGTGATACTATCATTTAATAATATTAATACTACTTGAAATAG
ACTAAGATAAAGAAAAGGGGTCTATATGATGTGCAGTTTTGTGCCTTTATGTATTTGCCT
TGTTCTTTGTTGAATGTGTGAAATTCTGTACTGTGGTTTTTCCTATAATAGAGAGTAGAG
CTGTGTATTGAATTAGACTATGCCCTTCTGATATCTTTACACTACTGAGAATAGCGTGGT
GTTGGCCATGTAAACCAATTTTCAAAGTTCTAATGATATGCCATGTGTTTGAGGGTTTTA
ACATTTCATTTTAACATTTCAGTATCACCATACACTAATGAATACTCCTGTGATAGATAA
GCCGTCGTTAAATAACTCCGAAAGAAAGGGCCATTGCTTGCGTTACTTTGAATTTAATGT
TGCTCTTGTGCACTGTATAAATATTGTTTGTGATGGATTAGACATTGTGACTTTTGCCTT
TTCAGAAGAAAAAAAAAAAGATAGGACAAAGTATTTGAAGCTCTTAAAATGTACATATTT
TGGTTCTTCTATCTCAAATTATTTAAAATGCATAATTCACATTTTTGGTAATAATTCTAT
GCAATTTTGTGGCATGATGTTTCTTCCACTTGTAATTTTATGTGCTTT
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599-664, , RaveNnA Score=14.76 |
PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)
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599-664, , RaveNnA Score=14.76 |
|
fco (1.41487) |
|
pro (0.512033) |
|
bfe (0.299715) |
|
ret (0.257467) |
|
fcc (0.197785) |
|
aor (0.195274) |
|
sag (0.182715) |
|
lin (0.145603) |
|
kid (0.129735) |
|
ese (0.126502) |
|
tra (0.123092) |
|
ecc (0.115035) |
|
fco (1.41487) |
|
pro (0.512033) |
|
bfe (0.299715) |
|
ret (0.257467) |
|
fcc (0.197785) |
|
aor (0.195274) |
|
sag (0.182715) |
|
lin (0.145603) |
|
kid (0.129735) |
|
ese (0.126502) |
|
tra (0.123092) |
|
ecc (0.115035) |
