Non-Coding RNA Search

Ss1.1-Ova1-OVR010033C09.5

Sequence:


               
               GGCTGGGGGTGGCCTGAGCATCCGAGGGTCGCGGGCTCCTGAGAGTCGGAGCTGCAGATC
TCGGGTGTACCGCGCGCTGCAGGTGCCAGAACGCCCCCGCAAAGGAGTCCAGACTTGGGG
GGAGGGGCCATAGAATTGCGGCCGACATCAGCAATACAAAATGCTCAGGTAGGAAAGTAA
CTCCAGGTTGCCGGCACCTCAGACGTCAGCCGGGATTTTGATTTGGGGATCGGCGAATAA
CAGACTGGGCGTGATCCTTCAGTAGTACAATAGTTGAGTGCACAAGCTCTAGAATTCTAT
CAGGTTCAGATTCAACTCCCACTGTTTTAGCTTATAGGTGTGACTGACATTTGTGACTTC
AGCTTTTGAAGCCCCAGTTTTGTCATCTGTAGAATGGACGTAATGGAAGCTATGTCACAG
GACCGTTGAGAAGATTAAATGAGACAATGCTTATGAAGCACTTTGCAAGAGGGAGCCCTG
GAGGCAGGGCCTGGAAGGCAGAGCACAACTGCTGTCACCAGAGACCATGGGCAGCATGAA
GACCCCAGTTGAGCTGGCCATCAGTGGGATGCAGACCCTCCATGTTCAGCAACGCTGCCG
GGGCAACCACCGGGTCAATGTTAGGCCGTCATACGTGGATGAGACTTTGTTTGGCAGTCC
TGCAGGCACCCGGCCCACACCACCAGATTTTGACCCACCCTGGATGAAGAAAGCCAACAG
AACCAGAGGAGTGGGTACAGGGGCATCACAGGCCTCAGGAGCCAACAGGAGCTGTGAGAC
CAGCTCTTCCAGGGGTAGCATCCCAACCCCCACACCAAGGAAGAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGGGGGTGGCCTGAGCATCCGAGGGTCGCGGGCTCCTGAGAGTCGGAGCTGCAGATC
TCGGGTGTACCGCGCGCTGCAGGTGCCAGAACGCCCCCGCAAAGGAGTCCAGACTTGGGG
GGAGGGGCCATAGAATTGCGGCCGACATCAGCAATACAAAATGCTCAGGTAGGAAAGTAA
CTCCAGGTTGCCGGCACCTCAGACGTCAGCCGGGATTTTGATTTGGGGATCGGCGAATAA
CAGACTGGGCGTGATCCTTCAGTAGTACAATAGTTGAGTGCACAAGCTCTAGAATTCTAT
CAGGTTCAGATTCAACTCCCACTGTTTTAGCTTATAGGTGTGACTGACATTTGTGACTTC
AGCTTTTGAAGCCCCAGTTTTGTCATCTGTAGAATGGACGTAATGGAAGCTATGTCACAG
GACCGTTGAGAAGATTAAATGAGACAATGCTTATGAAGCACTTTGCAAGAGGGAGCCCTG
GAGGCAGGGCCTGGAAGGCAGAGCACAACTGCTGTCACCAGAGACCATGGGCAGCATGAA
GACCCCAGTTGAGCTGGCCATCAGTGGGATGCAGACCCTCCATGTTCAGCAACGCTGCCG
GGGCAACCACCGGGTCAATGTTAGGCCGTCATACGTGGATGAGACTTTGTTTGGCAGTCC
TGCAGGCACCCGGCCCACACCACCAGATTTTGACCCACCCTGGATGAAGAAAGCCAACAG
AACCAGAGGAGTGGGTACAGGGGCATCACAGGCCTCAGGAGCCAACAGGAGCTGTGAGAC
CAGCTCTTCCAGGGGTAGCATCCCAACCCCCACACCAAGGAAGAAGAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61864897|ref|XP_591703.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61864897|ref|XP_591703.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               461-828, gnl|bosTau2|chr17 (37833906-37833540)
               

               
               461-828, gnl|Hg17|chr12 (112087198-112087564)
               

               
               461-828, gnl|Mm7|chr5 (119845724-119845373)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               461-828, gnl|bosTau2|chr17 (37833906-37833540)
               

               
               461-828, gnl|Hg17|chr12 (112087198-112087564)
               

               
               461-828, gnl|Mm7|chr5 (119845724-119845373)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               ill (0.175593)
               

               
               mcp (0.170648)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               mcp (0.170648)

	461-828, gnl\|bosTau2\|chr17 (37833906-37833540)
	461-828, gnl\|Hg17\|chr12 (112087198-112087564)
	461-828, gnl\|Mm7\|chr5 (119845724-119845373)