Non-Coding RNA Search

Ss1.1-Ova1-OVR010034F08.5

Sequence:


               
               GCTTTCCCGAGCTGGCGACCTGGGGCGCCGGCAGGAGGGGAGCCCTGTGTGCACAGGCCC
TGTGGCTGGAGGCGGGCGGTGGTGGTGGGTCCCGCAGGGCCAGCTTGGAGGGGCCGCAGG
TCCGAGGGGCCACGTGGGGCCGGCCCCCGTGTGGGGGCAGAGGCGGGGGCGCAGCTGTAG
CGCCTCACGGGCTGGGCCCCCGGGCCTCCCCACAGACCACGCTGGTGCCCCTCTTCCGGA
ACTCCCGCCTGGTGCAGTTCCACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCC
GCATCATGGACAACGGCTTCGTGAGTGGGCGGCAGGGGCAGCGGCGGACCGCAGGGCCAG
AAACTGGAAGGGGGACAGGTCCCCCCGCAAACAGCAGGAGGGGGCGTGAGGGCAGCCATG
GTGAAGGCGGGGTGGGGTTGCTGTGCGCCCCGACACGGGCTCCCCTGACCCCGCTGCACC
GATGGGGAGACCGGAGGCCCGGAGGCCCAGAGGCTGAGCCAGCCAGCCTGGCCTCCGGGC
TGCTGTGTGTCGGTTTACTCAGTGGAGCAGGGCTGCCCGCACCAGGCTCCCAGGTCCTCT
CCTGTGGCTTTCCTCCTGCTCGCTGCCCAGGGACGGGGTGCCGTCATGTCACTCCGGGTT
TTCCGGTGGAAACCCCCAGGCTCCCCCAGGGCCCTCGCCAGGCAGGCCGCTCCTTGAAGC
CCCCAGGGGTTACCTCCTGGTGGGTGTGGGCCAGGTCCGTTTCCCTCTCTGGGCCTCAGT
TTCTGCGAAGTGAGGAGGGTGAGAGACTTCTGCGCTCCTGAATCCGCAGCTGTCCCCTGT
CATAGTTGTGCCATCGGGCATTTGAGGGGCCGGTCCTGTACCTCTCGCGTGTCGTTGGTT
CCCTGAGGGAACTCAGTGCTTTTAAAGGCCGTGAGCCTGGCGGCCGGCCCTCCTCTCGGC
TCTCTGGGCCTCCCGTCAGGCTGTCGCCTCAGGTGGGCACTGTGAGGGGCTTCCTCTTGG
ACGTGTCACCACTGTCCCTCAAGGTGGCACACAGGGCCGAGGGTAGACACGATCCCATCT
GGCTCTGGGAGCCTGCAAATCCTGAAGCTTAGCCTCGGTTTGTCCACCTGTGAGGTGGGC
ACAGTGCTCTCCAGCCTGCAGAGAGGGGATCTGGCGAAGGGGCTCGGAGCAGTCGGTCCA
CTGGGCCCCTTGACGCTCCGGCCACTGTGACCTGCAGCCACATCCCTGAGCTGAGTGGAG
GTGACAGTGGCGTGGCCTCCTGGTGCCTCAGCTGCCTCAGGGGGTTGCCATGTGGAGGGA
GCCTGAACACTGGATTGGACCTGGTATTTCTTCCCCCGCGAGGCCTTCATGGGCACCGCT
GGTCCTGGGGGTGTCCGGGGTGCCGGCCTGGTGGCTCCCATCCACCCATCTCCCCAGAGC
TCATGGAGGAGACTTGGGCTGCAGAGCCGGTGGGCAGGCCTCTCTGGCTCCTGGTGTCCC
CAGCTGGGAGCAGCGACAGGGCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTCCCGAGCTGGCGACCTGGGGCGCCGGCAGGAGGGGAGCCCTGTGTGCACAGGCCC
TGTGGCTGGAGGCGGGCGGTGGTGGTGGGTCCCGCAGGGCCAGCTTGGAGGGGCCGCAGG
TCCGAGGGGCCACGTGGGGCCGGCCCCCGTGTGGGGGCAGAGGCGGGGGCGCAGCTGTAG
CGCCTCACGGGCTGGGCCCCCGGGCCTCCCCACAGACCACGCTGGTGCCCCTCTTCCGGA
ACTCCCGCCTGGTGCAGTTCCACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCC
GCATCATGGACAACGGCTTCGTGAGTGGGCGGCAGGGGCAGCGGCGGACCGCAGGGCCAG
AAACTGGAAGGGGGACAGGTCCCCCCGCAAACAGCAGGAGGGGGCGTGAGGGCAGCCATG
GTGAAGGCGGGGTGGGGTTGCTGTGCGCCCCGACACGGGCTCCCCTGACCCCGCTGCACC
GATGGGGAGACCGGAGGCCCGGAGGCCCAGAGGCTGAGCCAGCCAGCCTGGCCTCCGGGC
TGCTGTGTGTCGGTTTACTCAGTGGAGCAGGGCTGCCCGCACCAGGCTCCCAGGTCCTCT
CCTGTGGCTTTCCTCCTGCTCGCTGCCCAGGGACGGGGTGCCGTCATGTCACTCCGGGTT
TTCCGGTGGAAACCCCCAGGCTCCCCCAGGGCCCTCGCCAGGCAGGCCGCTCCTTGAAGC
CCCCAGGGGTTACCTCCTGGTGGGTGTGGGCCAGGTCCGTTTCCCTCTCTGGGCCTCAGT
TTCTGCGAAGTGAGGAGGGTGAGAGACTTCTGCGCTCCTGAATCCGCAGCTGTCCCCTGT
CATAGTTGTGCCATCGGGCATTTGAGGGGCCGGTCCTGTACCTCTCGCGTGTCGTTGGTT
CCCTGAGGGAACTCAGTGCTTTTAAAGGCCGTGAGCCTGGCGGCCGGCCCTCCTCTCGGC
TCTCTGGGCCTCCCGTCAGGCTGTCGCCTCAGGTGGGCACTGTGAGGGGCTTCCTCTTGG
ACGTGTCACCACTGTCCCTCAAGGTGGCACACAGGGCCGAGGGTAGACACGATCCCATCT
GGCTCTGGGAGCCTGCAAATCCTGAAGCTTAGCCTCGGTTTGTCCACCTGTGAGGTGGGC
ACAGTGCTCTCCAGCCTGCAGAGAGGGGATCTGGCGAAGGGGCTCGGAGCAGTCGGTCCA
CTGGGCCCCTTGACGCTCCGGCCACTGTGACCTGCAGCCACATCCCTGAGCTGAGTGGAG
GTGACAGTGGCGTGGCCTCCTGGTGCCTCAGCTGCCTCAGGGGGTTGCCATGTGGAGGGA
GCCTGAACACTGGATTGGACCTGGTATTTCTTCCCCCGCGAGGCCTTCATGGGCACCGCT
GGTCCTGGGGGTGTCCGGGGTGCCGGCCTGGTGGCTCCCATCCACCCATCTCCCCAGAGC
TCATGGAGGAGACTTGGGCTGCAGAGCCGGTGGGCAGGCCTCTCTGGCTCCTGGTGTCCC
CAGCTGGGAGCAGCGACAGGGCGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               208-506, gnl|bosTau2|chr18 (48893411-48893708)
               

               
               208-506, gnl|Hg17|chr19 (55053610-55053917)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               208-506, gnl|bosTau2|chr18 (48893411-48893708)
               

               
               208-506, gnl|Hg17|chr19 (55053610-55053917)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	208-506, gnl\|bosTau2\|chr18 (48893411-48893708)
	208-506, gnl\|Hg17\|chr19 (55053610-55053917)