Non-Coding RNA Search

Ss1.1-Ova1-OVR010034H04.5

Sequence:


               
               CTGGCGTCGAGAAAGTACAGTAAAAAGTCCAAGTGCAGCGCTGGGCGCAAGATGGGAACC
GGCTCCTCCAGCTACCGGCCCAAGGCCATCTACTTGGACATCGATGGACGCATTCAGAAG
GTCATCTTCAGCAGGTACTGCAACTCCAGCGACATCATGGACCTGTTCTGCATCGCGACC
GGCCTGCCTCGGAACACGACCATCTCACTCCTGACCACAGACGATGCCATGGTGTCCATC
GACCCCACCATGCCCGCCAATTCCGAACGAACTCCCTACAAAGTGAGACCTGTGGCCATC
AAGCAGCTCTCTGAGAAAGAAGAACTGATCCAGAGCGTGCTGACCCAGGCTGCAGAACAG
CTCTCAAGGGCATTTAAAATCAACGAACTGAAAGCGGAAGTTGCAAACCACTTGGCCGTA
CTAGAGAAGCGAGTTGAATTGGAAGGACTGAAGGTGGTGGAGATTGAGAAATGCAAGAGT
GACATTAAAAAGATGAGAGAGGAGCTGGCAGCCAGAAGCAACAGGACCAGCTGTCCCTGT
AAGTACAGCTTTTTGGACAATAACAAGAAGTTGACGCCTCGACGCGATGTCCCCACGTAT
CCCAAGTACCTGCTGTCCCCCGAGACCATAGACGCCCTGCGGAAGCCCTATGTCTTAGTC
CCAAACTCCTCATTTCCCCTTTGGTAACCGTGAGTTGGTTTTCTTTGTCTGTGAGTCTCT
TTCTGTTTTGGAAATAAGTTGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCGTCGAGAAAGTACAGTAAAAAGTCCAAGTGCAGCGCTGGGCGCAAGATGGGAACC
GGCTCCTCCAGCTACCGGCCCAAGGCCATCTACTTGGACATCGATGGACGCATTCAGAAG
GTCATCTTCAGCAGGTACTGCAACTCCAGCGACATCATGGACCTGTTCTGCATCGCGACC
GGCCTGCCTCGGAACACGACCATCTCACTCCTGACCACAGACGATGCCATGGTGTCCATC
GACCCCACCATGCCCGCCAATTCCGAACGAACTCCCTACAAAGTGAGACCTGTGGCCATC
AAGCAGCTCTCTGAGAAAGAAGAACTGATCCAGAGCGTGCTGACCCAGGCTGCAGAACAG
CTCTCAAGGGCATTTAAAATCAACGAACTGAAAGCGGAAGTTGCAAACCACTTGGCCGTA
CTAGAGAAGCGAGTTGAATTGGAAGGACTGAAGGTGGTGGAGATTGAGAAATGCAAGAGT
GACATTAAAAAGATGAGAGAGGAGCTGGCAGCCAGAAGCAACAGGACCAGCTGTCCCTGT
AAGTACAGCTTTTTGGACAATAACAAGAAGTTGACGCCTCGACGCGATGTCCCCACGTAT
CCCAAGTACCTGCTGTCCCCCGAGACCATAGACGCCCTGCGGAAGCCCTATGTCTTAGTC
CCAAACTCCTCATTTCCCCTTTGGTAACCGTGAGTTGGTTTTCTTTGTCTGTGAGTCTCT
TTCTGTTTTGGAAATAAGTTGATT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55656111|ref|XP_531476.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55656111|ref|XP_531476.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-122, gnl|bosTau2|chr28 (9624292-9624173)
               

               
               1-122, gnl|Hg17|chr21 (42946942-42947064)
               

               
               1-122, gnl|Mm7|chr17 (29577118-29577237)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-122, gnl|bosTau2|chr28 (9624292-9624173)
               

               
               1-122, gnl|Hg17|chr21 (42946942-42947064)
               

               
               1-122, gnl|Mm7|chr17 (29577118-29577237)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	1-122, gnl\|bosTau2\|chr28 (9624292-9624173)
	1-122, gnl\|Hg17\|chr21 (42946942-42947064)
	1-122, gnl\|Mm7\|chr17 (29577118-29577237)