Non-Coding RNA Search

Ss1.1-Ova1-OVR010039B03.5

Sequence:


               
               ATCATCTTCGAGCGGCTCTGCTCCCACCCAGGCTGCGCCGAGGACGAGAGCCACGTGGAC
CTGCTGCGCAAGGCGGAGACCGTCCTGGACCTCATGGTGACCAACTCGCACAAACTCCAG
CTGCCCGAAAACTTCGACATCCACCCCGTGGGCAGCCTGGCAGGAAAGATCCAGGCCCTT
CACTTCTCCCTGAGGCAGCTGGAGAGCTACCCGCCGCCGCTCAAGCACCTGTGCCGCGTC
TACATCCGGCTCTACCTTCAGCCGTGGCCTGTGGACACCAAGGTCAAGGCGCTACCTCTG
CCTGACAGGCTCAAGTGGTACCTCCTCAGCGAGCACAGCGGTGCCGTCGAAGATGACATC
TGACGGCTCGGACCGCAGGGAACAGGCTCTGGGTGGCCCCGTCAGCCTGCTGTGGACTTA
CGTACCGTGGCGGTCGTGGGGGTGCACCTTCGGTCCTGTCAGGAGGTGCAGGTTGGAGGC
GAGGCATCGGCCCCCCTGGGCAGAGGAGGCTGGGGGCCCCGTGGCCGCAGGCGCTCCAGC
AGGAGAGGCTTCCATCTTCCAGGGAGACTGCCCCCACCTCCCCCTGGTGGCGCCCCACGT
CTCAACCCATGGAACCAGGGGCAGGGTTTGGACTTGGGACAAGTTTATAATCTTTGATTT
GAGGGGAGCGCCGGGCATTTGCAGAAGCAGGGTTGCTCTAAGACCAGGCCACCTGAGAGC
TGCAGGAAGCAGGCCTGGGGTCGTAGCTAAAGCCCAGGGCAGGAGGGGCCTGGAGGGTGC
GGCCCAGCCGAGGGCCTTTCCTCTGGCCCCTTGACTCTAGCAACTGTCAGAAAACAAAAA
GTGCTCTTGTGGGCAGGGAGGAAGCTGAGCTGCCTCCTGCCGGCTTCTTTACAGCTCTGG
GGCCAGGTCACCTACCGCCCTGCCCACCGCTCTAGTGGCAGCTCTTTGTGCCAAATCTGG
GGTTTCGGGGACCATGTCTTCTGAAAAACAATCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCATCTTCGAGCGGCTCTGCTCCCACCCAGGCTGCGCCGAGGACGAGAGCCACGTGGAC
CTGCTGCGCAAGGCGGAGACCGTCCTGGACCTCATGGTGACCAACTCGCACAAACTCCAG
CTGCCCGAAAACTTCGACATCCACCCCGTGGGCAGCCTGGCAGGAAAGATCCAGGCCCTT
CACTTCTCCCTGAGGCAGCTGGAGAGCTACCCGCCGCCGCTCAAGCACCTGTGCCGCGTC
TACATCCGGCTCTACCTTCAGCCGTGGCCTGTGGACACCAAGGTCAAGGCGCTACCTCTG
CCTGACAGGCTCAAGTGGTACCTCCTCAGCGAGCACAGCGGTGCCGTCGAAGATGACATC
TGACGGCTCGGACCGCAGGGAACAGGCTCTGGGTGGCCCCGTCAGCCTGCTGTGGACTTA
CGTACCGTGGCGGTCGTGGGGGTGCACCTTCGGTCCTGTCAGGAGGTGCAGGTTGGAGGC
GAGGCATCGGCCCCCCTGGGCAGAGGAGGCTGGGGGCCCCGTGGCCGCAGGCGCTCCAGC
AGGAGAGGCTTCCATCTTCCAGGGAGACTGCCCCCACCTCCCCCTGGTGGCGCCCCACGT
CTCAACCCATGGAACCAGGGGCAGGGTTTGGACTTGGGACAAGTTTATAATCTTTGATTT
GAGGGGAGCGCCGGGCATTTGCAGAAGCAGGGTTGCTCTAAGACCAGGCCACCTGAGAGC
TGCAGGAAGCAGGCCTGGGGTCGTAGCTAAAGCCCAGGGCAGGAGGGGCCTGGAGGGTGC
GGCCCAGCCGAGGGCCTTTCCTCTGGCCCCTTGACTCTAGCAACTGTCAGAAAACAAAAA
GTGCTCTTGTGGGCAGGGAGGAAGCTGAGCTGCCTCCTGCCGGCTTCTTTACAGCTCTGG
GGCCAGGTCACCTACCGCCCTGCCCACCGCTCTAGTGGCAGCTCTTTGTGCCAAATCTGG
GGTTTCGGGGACCATGTCTTCTGAAAAACAATCATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-478, gnl|bosTau2|chr11 (79414031-79413553)
               

               
               1-478, gnl|Hg17|chr9 (129479985-129479483)
               

               
               1-478, gnl|Mm7|chr2 (30831510-30831011)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr11 (79414031-79413553)
               

               
               1-478, gnl|Hg17|chr9 (129479985-129479483)
               

               
               1-478, gnl|Mm7|chr2 (30831510-30831011)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	1-478, gnl\|bosTau2\|chr11 (79414031-79413553)
	1-478, gnl\|Hg17\|chr9 (129479985-129479483)
	1-478, gnl\|Mm7\|chr2 (30831510-30831011)