Ss1.1-Ova1-OVR010039G08.5
|
TTTCCTGGCGGTGAGTGCCGGGGCGGCAGGGTCAGGGATGCGGAGGAACGGCTCAGTTGG
TTGCCCTCCGTTCGTCCTCATGGAGGGGCCGGGGCCCGCGATGGGAAAGAAGAGGGAGGC
TGTCTCCCTCTTCCCAGTGTCCCGCTCCTGAGTTCTCCGGCACCACCTGCGGTGAGAGAA
CCCAGCCGTGAGGACGCTTTGTGACCTGGGAGCCTGTGACACCTGCCGTGGGAAGCCAGC
CGATAACGCCCAGGATGGTGGAGACCAGGGACCTGGTGCAGCTGCGGCAGCTCAACCTGG
AGCTCCTGAGGCAGCTGCGGGCCGGGCAGGATGCCGTGCGACGGGCTGTGGCCAAGGCAG
CCTCAGAGTCAAGCCAGGACCCCTGCAGCAGCAGCGACTCAGAGATACCATCCTCCCAGG
AGACGTCAGTAGCCTTCAGGGTGGCCTGCCCACAGGATGCCAACCAGAGTGACCCCTGTG
ATAGATCCTGGCTTGGTGGGGCCAGTTCCAGGGTGATCTCTCTCCCACCTGCCAAGCGCC
AACACCAGGAGTCCCTGGGCCCACAGAGATCCTACTCAGCTCCCTTGCTGGCCACCTCAG
ACTCCAGTGACCCAGAGCTTTCAGCAGAGCTGGATGACCGAAGAACCCGGGAGGCACAGG
CTCAGGGGTCCATCCTGGCTCGACAAAGCAAGGAATCGTCCGTGTCTGAGACCACCTTCA
ACAAGGAGTCTCCGGTGCCAGAGAGGAGCTGGCGCCTCAGACCGTACCTGGGCTATGATT
GGATTGCAGGGTCCCTGGACAACAGCTCTCCTGTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTCCTGGCGGTGAGTGCCGGGGCGGCAGGGTCAGGGATGCGGAGGAACGGCTCAGTTGG
TTGCCCTCCGTTCGTCCTCATGGAGGGGCCGGGGCCCGCGATGGGAAAGAAGAGGGAGGC
TGTCTCCCTCTTCCCAGTGTCCCGCTCCTGAGTTCTCCGGCACCACCTGCGGTGAGAGAA
CCCAGCCGTGAGGACGCTTTGTGACCTGGGAGCCTGTGACACCTGCCGTGGGAAGCCAGC
CGATAACGCCCAGGATGGTGGAGACCAGGGACCTGGTGCAGCTGCGGCAGCTCAACCTGG
AGCTCCTGAGGCAGCTGCGGGCCGGGCAGGATGCCGTGCGACGGGCTGTGGCCAAGGCAG
CCTCAGAGTCAAGCCAGGACCCCTGCAGCAGCAGCGACTCAGAGATACCATCCTCCCAGG
AGACGTCAGTAGCCTTCAGGGTGGCCTGCCCACAGGATGCCAACCAGAGTGACCCCTGTG
ATAGATCCTGGCTTGGTGGGGCCAGTTCCAGGGTGATCTCTCTCCCACCTGCCAAGCGCC
AACACCAGGAGTCCCTGGGCCCACAGAGATCCTACTCAGCTCCCTTGCTGGCCACCTCAG
ACTCCAGTGACCCAGAGCTTTCAGCAGAGCTGGATGACCGAAGAACCCGGGAGGCACAGG
CTCAGGGGTCCATCCTGGCTCGACAAAGCAAGGAATCGTCCGTGTCTGAGACCACCTTCA
ACAAGGAGTCTCCGGTGCCAGAGAGGAGCTGGCGCCTCAGACCGTACCTGGGCTATGATT
GGATTGCAGGGTCCCTGGACAACAGCTCTCCTGTCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
572-697, - strand, RNAmicro p=0.970367 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
572-697, - strand, RNAmicro p=0.970367 |
|
367-692, gnl|bosTau2|chr16 (21310407-21310079) |
|
367-692, gnl|canFam2|chr2 (87156102-87155374) |
|
367-692, gnl|dasNov1|scaffold_244640 (1556-900) |
|
367-692, gnl|echTel1|scaffold_295150 (4461-3826) |
|
367-692, gnl|hg17|chr1 (12016269-12016960) |
|
367-692, gnl|Hg17|chr1 (12016416-12016756) |
|
367-692, gnl|mm7|chr4 (146855701-146855037) |
|
367-692, gnl|Mm7|chr4 (146855558-146855206) |
|
367-692, gnl|oryCun1|scaffold_134182 (2808-3441) |
|
367-692, gnl|panTro1|chr1 (12222419-12223110) |
|
367-692, gnl|rheMac2|chr1 (15133983-15134667) |
|
367-692, gnl|rn3|chr5 (164954452-164953802) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
367-692, gnl|bosTau2|chr16 (21310407-21310079) |
|
367-692, gnl|canFam2|chr2 (87156102-87155374) |
|
367-692, gnl|dasNov1|scaffold_244640 (1556-900) |
|
367-692, gnl|echTel1|scaffold_295150 (4461-3826) |
|
367-692, gnl|hg17|chr1 (12016269-12016960) |
|
367-692, gnl|Hg17|chr1 (12016416-12016756) |
|
367-692, gnl|mm7|chr4 (146855701-146855037) |
|
367-692, gnl|Mm7|chr4 (146855558-146855206) |
|
367-692, gnl|oryCun1|scaffold_134182 (2808-3441) |
|
367-692, gnl|panTro1|chr1 (12222419-12223110) |
|
367-692, gnl|rheMac2|chr1 (15133983-15134667) |
|
367-692, gnl|rn3|chr5 (164954452-164953802) |
|
pla (0.133672) |
|
cty (0.10408) |
|
pla (0.133672) |
|
cty (0.10408) |
