Ss1.1-Ova1-OVR010042D02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGGCCCAGCTGCTGGAGGCTGCCGACTTCGCGGCTCGCAAGCACCAGCGACAGCGGCG GAAGGACCCCGAAGGAACCCCTTACATCAACCACCCTATCGGTGGGCGCGCCGCCGGAGG AGCAACGGCAGCAGCTTCTAGGGAGTGGGATCCGGGAAGGGAACGCGGAGGGCGTATACT TCATTGAGCGCCTAGTCTGTACCAAGATTTGTGCCAGGTGTGGCTCGGATCCTGACCCGT GAGGCGGGAATCACTGACATTGTGGTGTTACAGGCAGCCCTGCTCCATGACACGGTGGAG GACACAGACACCACCCTGGATGAGGTGGAGCTGCACTTTGGGGTACAAGTGCGGCGTCTG GTGGAGGAGGTAACAGATGACAAGACTCTGCCCAAGCTGGAGAGAAAGCGGTTGCAGGTG GAGCAGGCACCCCACAGCAGCCCAGGGGCTAAACTGGTGAAGCTGGCAGACAAGCTGTAC AATCTGAGGGACCTGAATCGCTGCACCCCAGAGGGATGGTCTGAGCGTCGAGTCCAGGAA TACTTTGAGTGGGCAGCACAGGTGGTGAAGGGGCTTCAGGGGACAAACCAACAGCTGGAA GAGGCTCTAAAGCAGCTGTTTAAGGAGCGGGGACTGACAGTCTGAGCAGTACTAGGAGCC ATCCGATGGTACAGACTCCATCCCTTTGCCCAGGCCAGAGAAGAGTCATGGTCCAGCCTT TCAGTGCCTCCTGAGCTCCCTCCTGGCTTTGCTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGGCCCAGCTGCTGGAGGCTGCCGACTTCGCGGCTCGCAAGCACCAGCGACAGCGGCG GAAGGACCCCGAAGGAACCCCTTACATCAACCACCCTATCGGTGGGCGCGCCGCCGGAGG AGCAACGGCAGCAGCTTCTAGGGAGTGGGATCCGGGAAGGGAACGCGGAGGGCGTATACT TCATTGAGCGCCTAGTCTGTACCAAGATTTGTGCCAGGTGTGGCTCGGATCCTGACCCGT GAGGCGGGAATCACTGACATTGTGGTGTTACAGGCAGCCCTGCTCCATGACACGGTGGAG GACACAGACACCACCCTGGATGAGGTGGAGCTGCACTTTGGGGTACAAGTGCGGCGTCTG GTGGAGGAGGTAACAGATGACAAGACTCTGCCCAAGCTGGAGAGAAAGCGGTTGCAGGTG GAGCAGGCACCCCACAGCAGCCCAGGGGCTAAACTGGTGAAGCTGGCAGACAAGCTGTAC AATCTGAGGGACCTGAATCGCTGCACCCCAGAGGGATGGTCTGAGCGTCGAGTCCAGGAA TACTTTGAGTGGGCAGCACAGGTGGTGAAGGGGCTTCAGGGGACAAACCAACAGCTGGAA GAGGCTCTAAAGCAGCTGTTTAAGGAGCGGGGACTGACAGTCTGAGCAGTACTAGGAGCC ATCCGATGGTACAGACTCCATCCCTTTGCCCAGGCCAGAGAAGAGTCATGGTCCAGCCTT TCAGTGCCTCCTGAGCTCCCTCCTGGCTTTGCTCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 1-218, gnl|bosTau2|chr21 (12129354-12129571) | |
| 1-218, gnl|Hg17|chr15 (89276763-89276546) | |
| 1-218, gnl|Mm7|chr7 (76212059-76212282) | |
| 270-515, gnl|bosTau2|chr21 (12129932-12130177) | |
| 270-515, gnl|canFam2|chr3 (56172081-56171907) | |
| 270-515, gnl|danRer3|chr11 (29493599-29493773) | |
| 270-515, gnl|dasNov1|scaffold_6973 (5497-5671) | |
| 270-515, gnl|echTel1|scaffold_310517 (123548-123384) | |
| 270-515, gnl|fr1|chrUn (232745352-232745178) | |
| 270-515, gnl|hg17|chr15 (89275937-89276111) | |
| 270-515, gnl|Hg17|chr15 (89276182-89275937) | |
| 270-515, gnl|loxAfr1|scaffold_13701 (23982-24158) | |
| 270-515, gnl|mm7|chr7 (76212869-76212695) | |
| 270-515, gnl|Mm7|chr7 (76212622-76212867) | |
| 270-515, gnl|monDom2|scaffold_45 (10124912-10125086) | |
| 270-515, gnl|oryCun1|scaffold_195191 (6387-6213) | |
| 270-515, gnl|panTro1|chr16 (90226818-90226992) | |
| 270-515, gnl|rn3|chr1 (136240658-136240484) | |
| 270-515, gnl|tetNig1|chrUn_random (6844214-6844388) | |
| 270-515, gnl|xenTro1|scaffold_396 (373759-373585) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-218, gnl|bosTau2|chr21 (12129354-12129571) | |
| 1-218, gnl|Hg17|chr15 (89276763-89276546) | |
| 1-218, gnl|Mm7|chr7 (76212059-76212282) | |
| 270-515, gnl|bosTau2|chr21 (12129932-12130177) | |
| 270-515, gnl|canFam2|chr3 (56172081-56171907) | |
| 270-515, gnl|danRer3|chr11 (29493599-29493773) | |
| 270-515, gnl|dasNov1|scaffold_6973 (5497-5671) | |
| 270-515, gnl|echTel1|scaffold_310517 (123548-123384) | |
| 270-515, gnl|fr1|chrUn (232745352-232745178) | |
| 270-515, gnl|hg17|chr15 (89275937-89276111) | |
| 270-515, gnl|Hg17|chr15 (89276182-89275937) | |
| 270-515, gnl|loxAfr1|scaffold_13701 (23982-24158) | |
| 270-515, gnl|mm7|chr7 (76212869-76212695) | |
| 270-515, gnl|Mm7|chr7 (76212622-76212867) | |
| 270-515, gnl|monDom2|scaffold_45 (10124912-10125086) | |
| 270-515, gnl|oryCun1|scaffold_195191 (6387-6213) | |
| 270-515, gnl|panTro1|chr16 (90226818-90226992) | |
| 270-515, gnl|rn3|chr1 (136240658-136240484) | |
| 270-515, gnl|tetNig1|chrUn_random (6844214-6844388) | |
| 270-515, gnl|xenTro1|scaffold_396 (373759-373585) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| cty (0.10408) | |
| eje (0.0988338) |