Ss1.1-Ova1-OVR010043G05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGCAGCCAGGCTGACAGCTGCTGCCCCAGGGTGGGCAGGAAGCAAGACGGGGGAGGGG GCGCAGGCGTCCTGCCCTGCCTTTCCTGCGAGGCGGTGTCGCCGGGCTCCGCTAGTTCCT CAGGGCAGCCAACCTCCGAGACAGCTGGTCCTCCTGGCTGCGCACGGAGCTCTCGCCCAC GGCGGAGGCGCCCTCGGGCAGCTGGCTGAGCTGGTCCAGGACCTCCAGGCCGTTCTCCTC AGCGATCTGCATGATGAGGCTGTCCACCTGCTCCTGCGGCGTGGTCAGCGTGGTGGCCGA GCTCATGGAGTCCTCCATCACCGCCGTGTGCACATCCAGGTTCTGCACCTGCTGCTCAAA CTTATCCATCACCGCAGAGACCTTCTGCAGGTCCATGGTGCTGAGCGCTCGGTCCAGGGC TTTGGTCACCTGTGCCATGTTCTTCGTCACCCCCTTCATGGTCACGGCCGTCTGCACCTT GGAGGCCACCGCATCCACGCGGGACGCCATGCGCAGCCAGTTCACACCCTCATTCTTCTT GCGAATGGCGTTCTCGGCGTACACCCGCGCACACTCCACGTTCTTCTGCTGAAGGGCCTT CTTCACCTTGGCCTGCTCCGCCTTGGAGTCCTTCTCCGCCTTCTTGGCCAGCTTCTCCAG CTGCTTCGCTGTGAACTTCAACTGGAACAGAGTATCGTCCATGGCGGGTCCGGCAGCGGC AGGCCTGGCGGGAGCGGCGGGACGGGAATCTCCCAGCGGCGTCGAAGGAGCCAACCGGCG CAGGCTGGCGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGCAGCCAGGCTGACAGCTGCTGCCCCAGGGTGGGCAGGAAGCAAGACGGGGGAGGGG GCGCAGGCGTCCTGCCCTGCCTTTCCTGCGAGGCGGTGTCGCCGGGCTCCGCTAGTTCCT CAGGGCAGCCAACCTCCGAGACAGCTGGTCCTCCTGGCTGCGCACGGAGCTCTCGCCCAC GGCGGAGGCGCCCTCGGGCAGCTGGCTGAGCTGGTCCAGGACCTCCAGGCCGTTCTCCTC AGCGATCTGCATGATGAGGCTGTCCACCTGCTCCTGCGGCGTGGTCAGCGTGGTGGCCGA GCTCATGGAGTCCTCCATCACCGCCGTGTGCACATCCAGGTTCTGCACCTGCTGCTCAAA CTTATCCATCACCGCAGAGACCTTCTGCAGGTCCATGGTGCTGAGCGCTCGGTCCAGGGC TTTGGTCACCTGTGCCATGTTCTTCGTCACCCCCTTCATGGTCACGGCCGTCTGCACCTT GGAGGCCACCGCATCCACGCGGGACGCCATGCGCAGCCAGTTCACACCCTCATTCTTCTT GCGAATGGCGTTCTCGGCGTACACCCGCGCACACTCCACGTTCTTCTGCTGAAGGGCCTT CTTCACCTTGGCCTGCTCCGCCTTGGAGTCCTTCTCCGCCTTCTTGGCCAGCTTCTCCAG CTGCTTCGCTGTGAACTTCAACTGGAACAGAGTATCGTCCATGGCGGGTCCGGCAGCGGC AGGCCTGGCGGGAGCGGCGGGACGGGAATCTCCCAGCGGCGTCGAAGGAGCCAACCGGCG CAGGCTGGCGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 77-703, gnl|bosTau2|chr24 (31645253-31644635) | |
| 77-703, gnl|Hg17|chr18 (11842138-11841519) | |
| 77-703, gnl|Mm7|chr18 (67598422-67597804) | |
| 115-322, gnl|bosTau2|chr18 (15442070-15442277) | |
| 115-322, gnl|canFam2|chr5 (66902658-66902529) | |
| 115-322, gnl|danRer3|chrUn (184090587-184090463) | |
| 115-322, gnl|dasNov1|scaffold_232840 (3510-3381) | |
| 115-322, gnl|echTel1|scaffold_253997 (13105-12975) | |
| 115-322, gnl|fr1|chrUn (235167612-235167747) | |
| 115-322, gnl|galGal2|chr11 (18761484-18761355) | |
| 115-322, gnl|hg17|chr1 (27697491-27697618) | |
| 115-322, gnl|Hg17|chr16 (88240416-88240624) | |
| 115-322, gnl|loxAfr1|scaffold_143054 (671-781) | |
| 115-322, gnl|mm7|chr3 (67708238-67708367) | |
| 115-322, gnl|Mm7|chr8 (121847207-121847402) | |
| 115-322, gnl|monDom2|scaffold_23 (6224866-6224737) | |
| 115-322, gnl|oryCun1|scaffold_76362 (723-594) | |
| 115-322, gnl|panTro1|chr1 (28385887-28386014) | |
| 115-322, gnl|rheMac2|chr1 (30379391-30379517) | |
| 115-322, gnl|rn3|chr19 (53529039-53529168) | |
| 115-322, gnl|tetNig1|chr13 (792791-792656) | |
| 115-322, gnl|xenTro1|scaffold_13 (2880472-2880601) | |
| 447-599, gnl|bosTau2|chr18 (15442924-15443076) | |
| 447-599, gnl|canFam2|chr5 (66901760-66901610) | |
| 447-599, gnl|canFam2|chr5 (66901764-66901608) | |
| 447-599, gnl|danRer3|chrUn (184090197-184090047) | |
| 447-599, gnl|danRer3|chrUn (184090197-184090045) | |
| 447-599, gnl|dasNov1|scaffold_232840 (2733-2582) | |
| 447-599, gnl|dasNov1|scaffold_232840 (2737-2580) | |
| 447-599, gnl|echTel1|scaffold_177025 (1010-1166) | |
| 447-599, gnl|echTel1|scaffold_253997 (12796-12675) | |
| 447-599, gnl|fr1|chrUn (235168156-235168301) | |
| 447-599, gnl|fr1|chrUn (235168149-235168303) | |
| 447-599, gnl|galGal2|chr11 (18760375-18760225) | |
| 447-599, gnl|galGal2|chr11 (18760379-18760223) | |
| 447-599, gnl|hg17|chr1 (27697795-27697944) | |
| 447-599, gnl|hg17|chr16 (88243253-88243409) | |
| 447-599, gnl|Hg17|chr16 (88243256-88243408) | |
| 447-599, gnl|loxAfr1|scaffold_8013 (37967-37818) | |
| 447-599, gnl|loxAfr1|scaffold_8013 (37965-37819) | |
| 447-599, gnl|mm7|chr3 (67708545-67708685) | |
| 447-599, gnl|mm7|chr8 (121849027-121849183) | |
| 447-599, gnl|Mm7|chr8 (121849030-121849182) | |
| 447-599, gnl|monDom2|scaffold_23 (6209559-6209403) | |
| 447-599, gnl|monDom2|scaffold_9 (66823536-66823686) | |
| 447-599, gnl|oryCun1|scaffold_176372 (32501-32648) | |
| 447-599, gnl|oryCun1|scaffold_176372 (32504-32650) | |
| 447-599, gnl|panTro1|chr1 (28386191-28386340) | |
| 447-599, gnl|panTro1|chr18 (83264331-83264487) | |
| 447-599, gnl|rheMac2|chr1 (30379695-30379843) | |
| 447-599, gnl|rheMac2|chr20 (87775392-87775548) | |
| 447-599, gnl|rn3|chr19 (53530457-53530604) | |
| 447-599, gnl|rn3|chr19 (53530450-53530606) | |
| 447-599, gnl|tetNig1|chr13 (792246-792101) | |
| 447-599, gnl|tetNig1|chr13 (792253-792099) | |
| 447-599, gnl|xenTro1|scaffold_13 (2883852-2883999) | |
| 447-599, gnl|xenTro1|scaffold_13 (2883846-2884001) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 77-703, gnl|bosTau2|chr24 (31645253-31644635) | |
| 77-703, gnl|Hg17|chr18 (11842138-11841519) | |
| 77-703, gnl|Mm7|chr18 (67598422-67597804) | |
| 115-322, gnl|bosTau2|chr18 (15442070-15442277) | |
| 115-322, gnl|canFam2|chr5 (66902658-66902529) | |
| 115-322, gnl|danRer3|chrUn (184090587-184090463) | |
| 115-322, gnl|dasNov1|scaffold_232840 (3510-3381) | |
| 115-322, gnl|echTel1|scaffold_253997 (13105-12975) | |
| 115-322, gnl|fr1|chrUn (235167612-235167747) | |
| 115-322, gnl|galGal2|chr11 (18761484-18761355) | |
| 115-322, gnl|hg17|chr1 (27697491-27697618) | |
| 115-322, gnl|Hg17|chr16 (88240416-88240624) | |
| 115-322, gnl|loxAfr1|scaffold_143054 (671-781) | |
| 115-322, gnl|mm7|chr3 (67708238-67708367) | |
| 115-322, gnl|Mm7|chr8 (121847207-121847402) | |
| 115-322, gnl|monDom2|scaffold_23 (6224866-6224737) | |
| 115-322, gnl|oryCun1|scaffold_76362 (723-594) | |
| 115-322, gnl|panTro1|chr1 (28385887-28386014) | |
| 115-322, gnl|rheMac2|chr1 (30379391-30379517) | |
| 115-322, gnl|rn3|chr19 (53529039-53529168) | |
| 115-322, gnl|tetNig1|chr13 (792791-792656) | |
| 115-322, gnl|xenTro1|scaffold_13 (2880472-2880601) | |
| 447-599, gnl|bosTau2|chr18 (15442924-15443076) | |
| 447-599, gnl|canFam2|chr5 (66901760-66901610) | |
| 447-599, gnl|canFam2|chr5 (66901764-66901608) | |
| 447-599, gnl|danRer3|chrUn (184090197-184090047) | |
| 447-599, gnl|danRer3|chrUn (184090197-184090045) | |
| 447-599, gnl|dasNov1|scaffold_232840 (2733-2582) | |
| 447-599, gnl|dasNov1|scaffold_232840 (2737-2580) | |
| 447-599, gnl|echTel1|scaffold_177025 (1010-1166) | |
| 447-599, gnl|echTel1|scaffold_253997 (12796-12675) | |
| 447-599, gnl|fr1|chrUn (235168156-235168301) | |
| 447-599, gnl|fr1|chrUn (235168149-235168303) | |
| 447-599, gnl|galGal2|chr11 (18760375-18760225) | |
| 447-599, gnl|galGal2|chr11 (18760379-18760223) | |
| 447-599, gnl|hg17|chr1 (27697795-27697944) | |
| 447-599, gnl|hg17|chr16 (88243253-88243409) | |
| 447-599, gnl|Hg17|chr16 (88243256-88243408) | |
| 447-599, gnl|loxAfr1|scaffold_8013 (37967-37818) | |
| 447-599, gnl|loxAfr1|scaffold_8013 (37965-37819) | |
| 447-599, gnl|mm7|chr3 (67708545-67708685) | |
| 447-599, gnl|mm7|chr8 (121849027-121849183) | |
| 447-599, gnl|Mm7|chr8 (121849030-121849182) | |
| 447-599, gnl|monDom2|scaffold_23 (6209559-6209403) | |
| 447-599, gnl|monDom2|scaffold_9 (66823536-66823686) | |
| 447-599, gnl|oryCun1|scaffold_176372 (32501-32648) | |
| 447-599, gnl|oryCun1|scaffold_176372 (32504-32650) | |
| 447-599, gnl|panTro1|chr1 (28386191-28386340) | |
| 447-599, gnl|panTro1|chr18 (83264331-83264487) | |
| 447-599, gnl|rheMac2|chr1 (30379695-30379843) | |
| 447-599, gnl|rheMac2|chr20 (87775392-87775548) | |
| 447-599, gnl|rn3|chr19 (53530457-53530604) | |
| 447-599, gnl|rn3|chr19 (53530450-53530606) | |
| 447-599, gnl|tetNig1|chr13 (792246-792101) | |
| 447-599, gnl|tetNig1|chr13 (792253-792099) | |
| 447-599, gnl|xenTro1|scaffold_13 (2883852-2883999) | |
| 447-599, gnl|xenTro1|scaffold_13 (2883846-2884001) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) |