Non-Coding RNA Search

Ss1.1-Ova1-OVR010044D02.5

Sequence:


               
               CGGTGCGCCGGCCGGTGCGCCGGCTCCGCGACCCCTGGAGCTGGCGCTGGCGCTGGTGCT
GGGGGCCCGGCGTGGGCCGTCGCCATGGCAGCGGAAGCCACGTGGTGAAGGGGCCGACCC
CCGGACTGGTCTGTCCGGCGGGCTCGCTGCCTGCGGGCGGGAACCCTGAGATTCTGCCCC
CGACTGGATGCCTGCCGAGTGCTTCACTTGCCCGGCGAGTGCCCTATAAGGACGGCCCAG
CAACAATGAAGGTCCTTTTACTGAAAGACCCTAAGGAGGACGACGACCGCGGCCAGGACC
CCTACATCAGGGAATTAGGACTGTATGGGCTTGAAGCCACTTTGATCCCTGTTCTGTCCT
TTGAGTTTCTGTCTCTTCCCAGTTTCTCGGAGAAGCTGTCTCATCCTGAAGGTTACGGGG
GCCTCATTTTTACCAGCCCCAGAGCAGTGGAAGCGGTGAAGCTATGTTTGGAGAAGGCCA
ATAAAACTGAAGCCTGGGAAACGTCTCTGAAAGAAAAATGGAATTCGAAGTCAGTGTATG
TGGTGGGAAATGCTACTGCTTCTCTAGTGAGTAAAATTGGCCTGGACCCTGAAGGAGAAA
ACTGTGGAAACGCAGAAAAGCTTGCAGAATACATTTGTTCCCGGGAGTCGTCAGCTCTGC
CTCTTCTCTTTCCCTGCGGAAACCTCAAACGAGAAACCCTGCCACGTATGCTCAAGGACA
AAGGGGTCCCCATGGAGAGCATAACTGTCTACCAGACGATTCCGCACCCCGGGATCCAGG
GGAACCTCAACAGCTACTATTCCCAGCAGGGCATTCCAGCCAGCATCACGTTTTTCAGCC
CCTCTGGCCTGTCGTACAGTCTCAAGCATATTCAGGAATTATCTGGTGACAGCATTGACC
AGATTAAGTTCGTGGCCATCGGCCCCACCACGGCCCGCGCCCTGGCCGCGCAGGGCCTGC
CCGTGAGCTGCACCGCGGAGAGCCCCACGCCGCGAGCCCTGGCCGCCGGCATCAGGACGG
CGCTCCAGCCCCACAGATGCTGAGCCAGCTGCCCTGGGTCTTGCTGCTCCCCCGGGGCCC
AGGCGACGTGTGGTGCCTCCGGGTGGGGCCAGGCCTCCGGCGGGGGATCCAGGAAGCTGT
CACCTCCTCACCCCTGCCTCGCGCCCGGAGGGAGCCACCCGGACACCGGGGAGCTGCAGG
GGGACCCGAGGCCAGCATCAGGCCCACATGCACCTGCCCTGCCTCCGCAGAGGCAACTCG
GACCCTCGGCCGGCACTCAGGGCTCCTCTGGCAGCAGGAAGGAGATCAAATACAGTGCGC
TGGACACTTGGGCTGATGGGTATTGTCACTACAGCCTCCGCTGTGGTCAGTGCAAAGCTG
TGTCTGGGGAGAAGCACGTGTACCCCGTTGTGAAAACTGATAAGCTGGAATCACTAATAA
AGTTTGCTGTGTGTGAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTGCGCCGGCCGGTGCGCCGGCTCCGCGACCCCTGGAGCTGGCGCTGGCGCTGGTGCT
GGGGGCCCGGCGTGGGCCGTCGCCATGGCAGCGGAAGCCACGTGGTGAAGGGGCCGACCC
CCGGACTGGTCTGTCCGGCGGGCTCGCTGCCTGCGGGCGGGAACCCTGAGATTCTGCCCC
CGACTGGATGCCTGCCGAGTGCTTCACTTGCCCGGCGAGTGCCCTATAAGGACGGCCCAG
CAACAATGAAGGTCCTTTTACTGAAAGACCCTAAGGAGGACGACGACCGCGGCCAGGACC
CCTACATCAGGGAATTAGGACTGTATGGGCTTGAAGCCACTTTGATCCCTGTTCTGTCCT
TTGAGTTTCTGTCTCTTCCCAGTTTCTCGGAGAAGCTGTCTCATCCTGAAGGTTACGGGG
GCCTCATTTTTACCAGCCCCAGAGCAGTGGAAGCGGTGAAGCTATGTTTGGAGAAGGCCA
ATAAAACTGAAGCCTGGGAAACGTCTCTGAAAGAAAAATGGAATTCGAAGTCAGTGTATG
TGGTGGGAAATGCTACTGCTTCTCTAGTGAGTAAAATTGGCCTGGACCCTGAAGGAGAAA
ACTGTGGAAACGCAGAAAAGCTTGCAGAATACATTTGTTCCCGGGAGTCGTCAGCTCTGC
CTCTTCTCTTTCCCTGCGGAAACCTCAAACGAGAAACCCTGCCACGTATGCTCAAGGACA
AAGGGGTCCCCATGGAGAGCATAACTGTCTACCAGACGATTCCGCACCCCGGGATCCAGG
GGAACCTCAACAGCTACTATTCCCAGCAGGGCATTCCAGCCAGCATCACGTTTTTCAGCC
CCTCTGGCCTGTCGTACAGTCTCAAGCATATTCAGGAATTATCTGGTGACAGCATTGACC
AGATTAAGTTCGTGGCCATCGGCCCCACCACGGCCCGCGCCCTGGCCGCGCAGGGCCTGC
CCGTGAGCTGCACCGCGGAGAGCCCCACGCCGCGAGCCCTGGCCGCCGGCATCAGGACGG
CGCTCCAGCCCCACAGATGCTGAGCCAGCTGCCCTGGGTCTTGCTGCTCCCCCGGGGCCC
AGGCGACGTGTGGTGCCTCCGGGTGGGGCCAGGCCTCCGGCGGGGGATCCAGGAAGCTGT
CACCTCCTCACCCCTGCCTCGCGCCCGGAGGGAGCCACCCGGACACCGGGGAGCTGCAGG
GGGACCCGAGGCCAGCATCAGGCCCACATGCACCTGCCCTGCCTCCGCAGAGGCAACTCG
GACCCTCGGCCGGCACTCAGGGCTCCTCTGGCAGCAGGAAGGAGATCAAATACAGTGCGC
TGGACACTTGGGCTGATGGGTATTGTCACTACAGCCTCCGCTGTGGTCAGTGCAAAGCTG
TGTCTGGGGAGAAGCACGTGTACCCCGTTGTGAAAACTGATAAGCTGGAATCACTAATAA
AGTTTGCTGTGTGTGAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               HEM4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               HEM4_HUMAN

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               907-1336, gnl|bosTau2|chr26 (33347540-33347966)
               

               
               907-1336, gnl|Hg17|chr10 (127467566-127467141)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               907-1336, gnl|bosTau2|chr26 (33347540-33347966)
               

               
               907-1336, gnl|Hg17|chr10 (127467566-127467141)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               pla (0.935704)
               

               
               cga (0.279096)
               

               
               nbm (0.198649)
               

               
               cli (0.152812)
               

               
               nca (0.136874)
               

               
               nmm (0.132802)
               

               
               ute (0.132784)
               

               
               jej (0.0989218)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.935704)
               

               
               cga (0.279096)
               

               
               nbm (0.198649)
               

               
               cli (0.152812)
               

               
               nca (0.136874)
               

               
               nmm (0.132802)
               

               
               ute (0.132784)
               

               
               jej (0.0989218)

	907-1336, gnl\|bosTau2\|chr26 (33347540-33347966)
	907-1336, gnl\|Hg17\|chr10 (127467566-127467141)

	pla (0.935704)
	cga (0.279096)
	nbm (0.198649)
	cli (0.152812)
	nca (0.136874)
	nmm (0.132802)
	ute (0.132784)
	jej (0.0989218)