Ss1.1-Ova1-OVR010045A03.5
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ACCACAGCAAGCAGAGGCTGAAAAATAAAGAGCAAAGAAGAAGAAAACAAAAGCTGCCAA
TTATGGAAGATAGAAGGGAGTCTGAACTGAAGACATTTTGCTCCAAAAACATACTGGTCA
TCCTTGGCTTCTCCTCCATCATTGCTGTGATAGCATTGCTTGCTCTGGGGCTGACCCAGA
ACAAACCATTGCCAGAAAATGTTAAGTTTGGGATTGTGTTGGATGCAGGCTCTTCTCACA
CGAGTTTGTACATCTATAAATGGCCAGCAGAAAAGGAGAATGACACAGGTGTGGTGAGTC
AGGTAGAAGAGTGCAAGCTAAAAGGTCCTGGAATCTCAGAATTTGCTAAAAAACTAGGAG
AAATAGACATTTATCTGGAGGCATGCATGGAAAGAGCCAGGACGGTGGTTCCAAAGTCCC
AGCATGCAGAGACACCAGTTTACTTGGGAGCCACAGCAGGCATGCGGTTACTCAGGATGA
AAAATGAAAATTTGGCAAGCAAAATCCTGTCTACAGTGGCAGAGAGCATCACGAGATACC
CCTTTGACTTCCAGGGTGCCAGGATCATCACTGGCCAAGAGGAAGGTGCCTATGGCTGGA
TTACTATCAACTATCTGCTGGACAAATTTATTCAGAAATCAGGTTGGTTTAACCTGAAGC
CAAGGAAAGGTGATACTCAGGAAACCTATGGAGCTTTAGACCTTGGAGGAGCCTCTACAC
AAATCACTTTTGTGCCCCAAAACCAAGTGCTCGAGTCTCCAGAAAACACGCTGCACTTCC
GCCTCTATGGCAAGAACTACAGTGTATACACACACAGTTTCTTATGCTATGGGAAGGATC
AAGCACTCTTGCAGAAACTGACCAAGGACCTTAAGAATACAAATGGAACCATCCATGAAC
CATGCTTTCACTCTGGATACCAGAGGAGAATGAATGTGAGTCACCTTTATGAGGCTCCCT
GCACCAGGAGATTTTTGACGTCTCTTCCATTTCCTGAACTTGAAATCCAAGGCACTGGAG
ACTTTCAGAAATGCCAGCAAAGCATCCGTCCACTCTTCAACACCAGTTACTGCCCTTACT
CTCGTTGTTCCTTTGATGGGGTTTTCTTACCATTACCTCAAGGGGATTTTGCGGCATTTT
CAGCTTTTTACTATGTGATGGGGTTTTTAAACCTTACATCAGAGGAAGGCTCATCTCAGT
CAAAGGTGACTAGCACATTGGAAGCGTTCTGCTCTCGGCCTTGGGCAGAGCTGCAGATGT
ATTTTGGTGACGTGAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGCACCTACATCC
TCACACTTCTTCTGAGTGGCTATCATTTTACAGCTGAGACCTGGAAGAATATTCATTTCA
TGGGCAAGGTCCAGAGCACCAGTGTCGGGTGGACTTTGGGCTACATGCTGAACCTGACCA
ACATGATCCCATCTGAAGAGCCATCATCCACACGTCTCTCCCACTCCACCTATGTCTTCC
TCATGGTCCTTTTCTCCCTAATCCTGGTCATAGTGGTCATCATAGGCCTATTTGTCTGCC
ACAGGCCTTCATATTTCTGGAAAGATATGGTATAGCAGGAGCAACTGAAATCTGCTGGCT
GGAGTGAGAAGAAAACTCGCTCAGGGAGCACTTTCCTCCGCAGTGGTGTACAAGGTCATC
GTTCCTTGCTCACCAAGGCCAGTCTTGACCAGCATGAAGTTTCCTTGGCTTCTGCTGAAG
CTTTTCTGTGGGAGGTATTCACCACCCTCTGCCTCAAAGACTTCCTGGCAGACATTATCT
CTCTTGTGAGTCTTTCCAAACACCCCCTTTTTCTTTTGTACTCTGTGCTGGGTAGGTCTT
AAAGACCTGCCTCCTTTCATGATCTTTGCTTTATAAAGAGCAATATTGACCTGGTCCAGA
AGAACTGAGAATCCTGAGTCCTGTGCTGGGAAGTTGCACTCACTAAAAGAAGAGTCTTGG
GAACTGATTAAGTTGTGGTCTTACAGACCCGCTCTCTCTCTCTCCCTCTCCCGTTTCCCA
TTTTTTTAAGAAAGCCATAGAGGAGTTCCCGTCGTGGCGCAGTGGTTAACGAATCCGACT
AGGAACCATGGGGTTGCGGGTTCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACCACAGCAAGCAGAGGCTGAAAAATAAAGAGCAAAGAAGAAGAAAACAAAAGCTGCCAA
TTATGGAAGATAGAAGGGAGTCTGAACTGAAGACATTTTGCTCCAAAAACATACTGGTCA
TCCTTGGCTTCTCCTCCATCATTGCTGTGATAGCATTGCTTGCTCTGGGGCTGACCCAGA
ACAAACCATTGCCAGAAAATGTTAAGTTTGGGATTGTGTTGGATGCAGGCTCTTCTCACA
CGAGTTTGTACATCTATAAATGGCCAGCAGAAAAGGAGAATGACACAGGTGTGGTGAGTC
AGGTAGAAGAGTGCAAGCTAAAAGGTCCTGGAATCTCAGAATTTGCTAAAAAACTAGGAG
AAATAGACATTTATCTGGAGGCATGCATGGAAAGAGCCAGGACGGTGGTTCCAAAGTCCC
AGCATGCAGAGACACCAGTTTACTTGGGAGCCACAGCAGGCATGCGGTTACTCAGGATGA
AAAATGAAAATTTGGCAAGCAAAATCCTGTCTACAGTGGCAGAGAGCATCACGAGATACC
CCTTTGACTTCCAGGGTGCCAGGATCATCACTGGCCAAGAGGAAGGTGCCTATGGCTGGA
TTACTATCAACTATCTGCTGGACAAATTTATTCAGAAATCAGGTTGGTTTAACCTGAAGC
CAAGGAAAGGTGATACTCAGGAAACCTATGGAGCTTTAGACCTTGGAGGAGCCTCTACAC
AAATCACTTTTGTGCCCCAAAACCAAGTGCTCGAGTCTCCAGAAAACACGCTGCACTTCC
GCCTCTATGGCAAGAACTACAGTGTATACACACACAGTTTCTTATGCTATGGGAAGGATC
AAGCACTCTTGCAGAAACTGACCAAGGACCTTAAGAATACAAATGGAACCATCCATGAAC
CATGCTTTCACTCTGGATACCAGAGGAGAATGAATGTGAGTCACCTTTATGAGGCTCCCT
GCACCAGGAGATTTTTGACGTCTCTTCCATTTCCTGAACTTGAAATCCAAGGCACTGGAG
ACTTTCAGAAATGCCAGCAAAGCATCCGTCCACTCTTCAACACCAGTTACTGCCCTTACT
CTCGTTGTTCCTTTGATGGGGTTTTCTTACCATTACCTCAAGGGGATTTTGCGGCATTTT
CAGCTTTTTACTATGTGATGGGGTTTTTAAACCTTACATCAGAGGAAGGCTCATCTCAGT
CAAAGGTGACTAGCACATTGGAAGCGTTCTGCTCTCGGCCTTGGGCAGAGCTGCAGATGT
ATTTTGGTGACGTGAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGCACCTACATCC
TCACACTTCTTCTGAGTGGCTATCATTTTACAGCTGAGACCTGGAAGAATATTCATTTCA
TGGGCAAGGTCCAGAGCACCAGTGTCGGGTGGACTTTGGGCTACATGCTGAACCTGACCA
ACATGATCCCATCTGAAGAGCCATCATCCACACGTCTCTCCCACTCCACCTATGTCTTCC
TCATGGTCCTTTTCTCCCTAATCCTGGTCATAGTGGTCATCATAGGCCTATTTGTCTGCC
ACAGGCCTTCATATTTCTGGAAAGATATGGTATAGCAGGAGCAACTGAAATCTGCTGGCT
GGAGTGAGAAGAAAACTCGCTCAGGGAGCACTTTCCTCCGCAGTGGTGTACAAGGTCATC
GTTCCTTGCTCACCAAGGCCAGTCTTGACCAGCATGAAGTTTCCTTGGCTTCTGCTGAAG
CTTTTCTGTGGGAGGTATTCACCACCCTCTGCCTCAAAGACTTCCTGGCAGACATTATCT
CTCTTGTGAGTCTTTCCAAACACCCCCTTTTTCTTTTGTACTCTGTGCTGGGTAGGTCTT
AAAGACCTGCCTCCTTTCATGATCTTTGCTTTATAAAGAGCAATATTGACCTGGTCCAGA
AGAACTGAGAATCCTGAGTCCTGTGCTGGGAAGTTGCACTCACTAAAAGAAGAGTCTTGG
GAACTGATTAAGTTGTGGTCTTACAGACCCGCTCTCTCTCTCTCCCTCTCCCGTTTCCCA
TTTTTTTAAGAAAGCCATAGAGGAGTTCCCGTCGTGGCGCAGTGGTTAACGAATCCGACT
AGGAACCATGGGGTTGCGGGTTCG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
1133-1250, gnl|bosTau2|chr26 (8351458-8351341) |
|
1133-1250, gnl|canFam2|chr28 (12301729-12301886) |
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1133-1250, gnl|dasNov1|scaffold_28837 (9441-9601) |
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1133-1250, gnl|echTel1|scaffold_302367 (43329-43169) |
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1133-1250, gnl|galGal2|chr6 (21208236-21208400) |
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1133-1250, gnl|hg17|chr10 (97610192-97610347) |
|
1133-1250, gnl|Hg17|chr10 (97610215-97610329) |
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1133-1250, gnl|loxAfr1|scaffold_22382 (19829-19669) |
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1133-1250, gnl|mm7|chr19 (40627666-40627830) |
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1133-1250, gnl|Mm7|chr19 (40627692-40627812) |
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1133-1250, gnl|monDom2|scaffold_14 (26949653-26949486) |
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1133-1250, gnl|panTro1|chr8 (99295395-99295550) |
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1133-1250, gnl|rheMac2|chr9 (95394610-95394765) |
| |
|
1387-2009, gnl|bosTau2|chr26 (8346310-8345688) |
|
1387-2009, gnl|Hg17|chr10 (97615922-97616558) |
|
1387-2009, gnl|Mm7|chr19 (40632847-40633440) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1133-1250, gnl|bosTau2|chr26 (8351458-8351341) |
|
1133-1250, gnl|canFam2|chr28 (12301729-12301886) |
|
1133-1250, gnl|dasNov1|scaffold_28837 (9441-9601) |
|
1133-1250, gnl|echTel1|scaffold_302367 (43329-43169) |
|
1133-1250, gnl|galGal2|chr6 (21208236-21208400) |
|
1133-1250, gnl|hg17|chr10 (97610192-97610347) |
|
1133-1250, gnl|Hg17|chr10 (97610215-97610329) |
|
1133-1250, gnl|loxAfr1|scaffold_22382 (19829-19669) |
|
1133-1250, gnl|mm7|chr19 (40627666-40627830) |
|
1133-1250, gnl|Mm7|chr19 (40627692-40627812) |
|
1133-1250, gnl|monDom2|scaffold_14 (26949653-26949486) |
|
1133-1250, gnl|panTro1|chr8 (99295395-99295550) |
|
1133-1250, gnl|rheMac2|chr9 (95394610-95394765) |
| |
|
1387-2009, gnl|bosTau2|chr26 (8346310-8345688) |
|
1387-2009, gnl|Hg17|chr10 (97615922-97616558) |
|
1387-2009, gnl|Mm7|chr19 (40632847-40633440) |
|
spl (0.286369) |
|
med (0.116252) |
|
cbl (0.114797) |
|
spl (0.286369) |
|
med (0.116252) |
|
cbl (0.114797) |
