Ss1.1-Ova1-OVR010046E02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATGACCTAGCTTTCTTTGAAGAACACAAACTTTGAAAAGGACTGTTTCTTAAAAAATC AGTAGTTGCTTGCATTGTGAAAGAATGTCTAATTAAATGGCCTAGTCGTATCCTTAATAT TTCACTGTCTGTGCAACTCATTTTTTAAATAGTATGGGATAAACCTTTCAGTGCAGTTCA GTTGCATGGAGAAAAGTGTACCTTTCGAAATCGCCTGAATTTGCAGTGAGAAAATCATCT CCGATCTTACACCAGGTAGAAAGTAAGCACTGGCAATAGCATCTTGCCAAGAAAATCTTC ATTCCAGACAAGTGCTGTGTGTGGGGAGAGGTCCTGTGTAAACTGCCTCATGTGTGAGAT ACTCTGTTTTTCCTGAAAGGCCCGTGTAATAGTTTATTTGGTGACATCAGAAAACTAAGT CCCCAACATTTGTGAGCCTGGAAGCTTCTGGAAAGCCTAGTGTCCTTATTTAAAAGTGAC AACTCAACTCAGAACCTAGCATTGCTATGTGAACAACAAGCTGTCTTTGTAGAATGTGTG TTCTTCTCAGAGCCGATTTGCTGGTTGAGCAGCCCTGCAGAAGGTCAGGGCCCTGTATCC AAATCTTCTGTAGTTCTTGCAAAACTTCAGACTCCAGGCACTTTCCAACCCTTGAAGAAT CAGAATGTCTGTGAGCAGAACCTGGAATCTACTCTTAACTGGAACCTCCCAGAATGAGAG TTTATCACACCAAGTTTTGAGAATTCAAGTTTTCTTGCCAAAGTTTAAGGGGCAGCTGTT GCTTTCCTCCCCACATGCTTACTGCTCTGCTCACTTCCCGTTCATCTCTTAGTGGGGCCC TGTGGGCATGGGGGGGTGGCAACTCAGACCCCCCACCCCAACCCTGTCGGCTGCTGTACA GGCAAACCCGGAACCCACCTACTAGTAGAGTTAGGATTGCCTTGGGGCACAAGGCCTGAG ACCCCTCCCGCTGTGGGATCCGTCCCCTCCCAGCCTGTGTGATCTGCGGAGGCCCAGTCC TAGCGGCCTCCTCTTCAACTGTCCAGATAAGGTTTCAACCAGATAATTGGGAAAGGACCC CAAGGGACAGGAGGCCTGGGAGAGCACAGAGCAAGAATGCTGAATGGAAAGCTGTCTGCT GGACACAGTGCAGCACCTACATTGGAAGATTTTAGTCCCAAGGCTGGTAATTGCCAGAGA AATGTGTGGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATGACCTAGCTTTCTTTGAAGAACACAAACTTTGAAAAGGACTGTTTCTTAAAAAATC AGTAGTTGCTTGCATTGTGAAAGAATGTCTAATTAAATGGCCTAGTCGTATCCTTAATAT TTCACTGTCTGTGCAACTCATTTTTTAAATAGTATGGGATAAACCTTTCAGTGCAGTTCA GTTGCATGGAGAAAAGTGTACCTTTCGAAATCGCCTGAATTTGCAGTGAGAAAATCATCT CCGATCTTACACCAGGTAGAAAGTAAGCACTGGCAATAGCATCTTGCCAAGAAAATCTTC ATTCCAGACAAGTGCTGTGTGTGGGGAGAGGTCCTGTGTAAACTGCCTCATGTGTGAGAT ACTCTGTTTTTCCTGAAAGGCCCGTGTAATAGTTTATTTGGTGACATCAGAAAACTAAGT CCCCAACATTTGTGAGCCTGGAAGCTTCTGGAAAGCCTAGTGTCCTTATTTAAAAGTGAC AACTCAACTCAGAACCTAGCATTGCTATGTGAACAACAAGCTGTCTTTGTAGAATGTGTG TTCTTCTCAGAGCCGATTTGCTGGTTGAGCAGCCCTGCAGAAGGTCAGGGCCCTGTATCC AAATCTTCTGTAGTTCTTGCAAAACTTCAGACTCCAGGCACTTTCCAACCCTTGAAGAAT CAGAATGTCTGTGAGCAGAACCTGGAATCTACTCTTAACTGGAACCTCCCAGAATGAGAG TTTATCACACCAAGTTTTGAGAATTCAAGTTTTCTTGCCAAAGTTTAAGGGGCAGCTGTT GCTTTCCTCCCCACATGCTTACTGCTCTGCTCACTTCCCGTTCATCTCTTAGTGGGGCCC TGTGGGCATGGGGGGGTGGCAACTCAGACCCCCCACCCCAACCCTGTCGGCTGCTGTACA GGCAAACCCGGAACCCACCTACTAGTAGAGTTAGGATTGCCTTGGGGCACAAGGCCTGAG ACCCCTCCCGCTGTGGGATCCGTCCCCTCCCAGCCTGTGTGATCTGCGGAGGCCCAGTCC TAGCGGCCTCCTCTTCAACTGTCCAGATAAGGTTTCAACCAGATAATTGGGAAAGGACCC CAAGGGACAGGAGGCCTGGGAGAGCACAGAGCAAGAATGCTGAATGGAAAGCTGTCTGCT GGACACAGTGCAGCACCTACATTGGAAGATTTTAGTCCCAAGGCTGGTAATTGCCAGAGA AATGTGTGGCTG |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-323, gnl|bosTau2|chr9 (1452823-1453156) | |
| 1-323, gnl|canFam2|chr12 (36797917-36798574) | |
| 1-323, gnl|dasNov1|scaffold_2453 (57184-57790) | |
| 1-323, gnl|hg17|chr6 (72184314-72184954) | |
| 1-323, gnl|Hg17|chr6 (72184828-72184487) | |
| 1-323, gnl|loxAfr1|scaffold_105418 (1511-887) | |
| 1-323, gnl|mm7|chr1 (23470793-23470275) | |
| 1-323, gnl|Mm7|chr1 (23470390-23470698) | |
| 1-323, gnl|oryCun1|scaffold_215080 (87703-87119) | |
| 1-323, gnl|panTro1|chr5 (73322126-73322768) | |
| 1-323, gnl|rheMac2|chr4 (67719858-67720534) | |
| 1-323, gnl|rn3|chr9 (22131074-22130555) | |
| 398-605, gnl|bosTau2|chr9 (1453183-1453394) | |
| 398-605, gnl|Hg17|chr6 (72184445-72184225) | |
| 911-1208, gnl|bosTau2|chr9 (1453714-1454012) | |
| 911-1208, gnl|canFam2|chr12 (36796861-36797559) | |
| 911-1208, gnl|dasNov1|scaffold_2453 (56094-56871) | |
| 911-1208, gnl|echTel1|scaffold_318789 (51435-50762) | |
| 911-1208, gnl|hg17|chr6 (72183046-72183829) | |
| 911-1208, gnl|Hg17|chr6 (72183759-72183408) | |
| 911-1208, gnl|loxAfr1|scaffold_105418 (2591-1851) | |
| 911-1208, gnl|mm7|chr1 (23471727-23471068) | |
| 911-1208, gnl|oryCun1|scaffold_215080 (88795-88042) | |
| 911-1208, gnl|panTro1|chr5 (73320872-73321656) | |
| 911-1208, gnl|rheMac2|chr4 (67718611-67719372) | |
| 911-1208, gnl|rn3|chr9 (22132015-22131356) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-323, gnl|bosTau2|chr9 (1452823-1453156) | |
| 1-323, gnl|canFam2|chr12 (36797917-36798574) | |
| 1-323, gnl|dasNov1|scaffold_2453 (57184-57790) | |
| 1-323, gnl|hg17|chr6 (72184314-72184954) | |
| 1-323, gnl|Hg17|chr6 (72184828-72184487) | |
| 1-323, gnl|loxAfr1|scaffold_105418 (1511-887) | |
| 1-323, gnl|mm7|chr1 (23470793-23470275) | |
| 1-323, gnl|Mm7|chr1 (23470390-23470698) | |
| 1-323, gnl|oryCun1|scaffold_215080 (87703-87119) | |
| 1-323, gnl|panTro1|chr5 (73322126-73322768) | |
| 1-323, gnl|rheMac2|chr4 (67719858-67720534) | |
| 1-323, gnl|rn3|chr9 (22131074-22130555) | |
| 398-605, gnl|bosTau2|chr9 (1453183-1453394) | |
| 398-605, gnl|Hg17|chr6 (72184445-72184225) | |
| 911-1208, gnl|bosTau2|chr9 (1453714-1454012) | |
| 911-1208, gnl|canFam2|chr12 (36796861-36797559) | |
| 911-1208, gnl|dasNov1|scaffold_2453 (56094-56871) | |
| 911-1208, gnl|echTel1|scaffold_318789 (51435-50762) | |
| 911-1208, gnl|hg17|chr6 (72183046-72183829) | |
| 911-1208, gnl|Hg17|chr6 (72183759-72183408) | |
| 911-1208, gnl|loxAfr1|scaffold_105418 (2591-1851) | |
| 911-1208, gnl|mm7|chr1 (23471727-23471068) | |
| 911-1208, gnl|oryCun1|scaffold_215080 (88795-88042) | |
| 911-1208, gnl|panTro1|chr5 (73320872-73321656) | |
| 911-1208, gnl|rheMac2|chr4 (67718611-67719372) | |
| 911-1208, gnl|rn3|chr9 (22132015-22131356) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) |