Non-Coding RNA Search

Ss1.1-Ova1-OVR010047C02.5

Sequence:


               
               GAGCCCCACCTGTTCGGGTGGAGCTGAGCCGAAGACAGGCAGGCGTGAGAGGCGGCAGGG
CAAGAATGTTTCACTTAAGGACTTGTGCTGCTAAGTTGAGGCCTTTGACGGCTTCACAGA
CTGCGAAGACATTGTGCCCAAACAGACCAGCAGCAGCCAGGACGTTGGGGCAGGTCCGGT
GCTATAGCGCCCCTGTGGCTGCCGAGCCCTTTCTCAGCGGGACTAGCTCCAACTATGTGG
AGGAGATGTACTACGCTTGGTTGGAAAACCCCAAAAGTGTACACAAGTCATGGGACATTT
TTTTCCGAAACACCAATGCCGGAGCGCCCCCGGGCACCGCCTACCAGAGCCCGCTCCCCC
TGAGCCCCGGCTCCCTGTCGGCAGTGGCCAGAGCGCAGCCCCTGGTGGGAGCCCAGCCCA
ACGTGGACAAGCTGGTGGAGGATCACCTGGCGGTGCAGTCTCTCATCAGGGCCTACCAGA
TACGAGGGCATCATGTAGCACAGCTGGACCCCCTGGGAATTTTGGATGCTGATCTGGACT
CCTCCGTGCCCGCTGATATTATCTCATCCACAGACAAACTTGGGTTCTACGGCCTGGACG
AGTCTGACCTAGACAAGGTCTTCCCGCTCTGAAGAAGGGCCCCGCGGGAAGCTCGGCCGG
CTCACTGTCCTAAGAGCACCTTGCGACCGCCTCGCAGGACTTCTCCACACCTGACCTTGG
AGACCAGCGTGTTGTTCATCAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCCCCACCTGTTCGGGTGGAGCTGAGCCGAAGACAGGCAGGCGTGAGAGGCGGCAGGG
CAAGAATGTTTCACTTAAGGACTTGTGCTGCTAAGTTGAGGCCTTTGACGGCTTCACAGA
CTGCGAAGACATTGTGCCCAAACAGACCAGCAGCAGCCAGGACGTTGGGGCAGGTCCGGT
GCTATAGCGCCCCTGTGGCTGCCGAGCCCTTTCTCAGCGGGACTAGCTCCAACTATGTGG
AGGAGATGTACTACGCTTGGTTGGAAAACCCCAAAAGTGTACACAAGTCATGGGACATTT
TTTTCCGAAACACCAATGCCGGAGCGCCCCCGGGCACCGCCTACCAGAGCCCGCTCCCCC
TGAGCCCCGGCTCCCTGTCGGCAGTGGCCAGAGCGCAGCCCCTGGTGGGAGCCCAGCCCA
ACGTGGACAAGCTGGTGGAGGATCACCTGGCGGTGCAGTCTCTCATCAGGGCCTACCAGA
TACGAGGGCATCATGTAGCACAGCTGGACCCCCTGGGAATTTTGGATGCTGATCTGGACT
CCTCCGTGCCCGCTGATATTATCTCATCCACAGACAAACTTGGGTTCTACGGCCTGGACG
AGTCTGACCTAGACAAGGTCTTCCCGCTCTGAAGAAGGGCCCCGCGGGAAGCTCGGCCGG
CTCACTGTCCTAAGAGCACCTTGCGACCGCCTCGCAGGACTTCTCCACACCTGACCTTGG
AGACCAGCGTGTTGTTCATCAATG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5SVY1_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5SVY1_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               286-482, gnl|bosTau2|chr4 (42992254-42992450)
               

               
               286-482, gnl|Hg17|chr7 (44458164-44458360)
               

               
               286-482, gnl|Mm7|chr11 (6265789-6265985)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               286-482, gnl|bosTau2|chr4 (42992254-42992450)
               

               
               286-482, gnl|Hg17|chr7 (44458164-44458360)
               

               
               286-482, gnl|Mm7|chr11 (6265789-6265985)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cki (0.165235)
               

               
               clu (0.119646)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               clu (0.119646)
               

               
               cty (0.10408)

	286-482, gnl\|bosTau2\|chr4 (42992254-42992450)
	286-482, gnl\|Hg17\|chr7 (44458164-44458360)
	286-482, gnl\|Mm7\|chr11 (6265789-6265985)