Ss1.1-Ova1-OVRM10003B03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATGCGTACAAGGCGGGATCAGCCGCCACATCCTCCGACCTTCTGGGTAATGTAGTTTCT GGAGGGAGGCGCTCAGCCTTGATTTCCCCAGTCGTGGAGCCCACCTGAGCGGACCCCAGG CTGGGCCAGCCAAGCAGGTGCTGTCCGCGGGGCCAGAGGCTCTGAGGATGTCTGCGGTGT CCCGGAAACCCAAGACGTTCAAGCTGCGGGCCCTGCACAGCCAGAAGAAGTTTGGGGTGG CAGGCAGGAGCTGCGAGGAAGTGCTGCGGAAGGGGTGCCTCCACTTACAGCTCCCTGTGC CCGGCTCCCGCCTGTGCCTCTATGAGGACGGCACGGAGGTGACTGAAGATTACTTCTGGA GTATCCCCGATGACTCGGAGCTAGTGCTTCTCACCACGGGCCAGACCTGGCAGGGCTATG TGAGTGACATCAGCCACTTCCTGAGCGTGTTCCAGAAGCCGCACGCTGGGGTGATCCAGG CTGCCCGGCAGCTGCTGTCCGACGAGCGGGCCCCGCTGCGGCAGAAGCTCCTGGCCGACC TCCTGGGCACCGTCAGCGAGAACATCGCGGCCGAGACCAGGGCCGAGGACCCGCCGTGGT TTGAAGGTCTGGAGGCCCGATTTAGGAGTAAGTCTGCCTACCTGAGGTACAGCTGCGAGA GCCGGATCCGAAGCTACCTGAGAGAGGTGACCTCATGCGCCTCCTTGGTCAGTGTGGCAG CTCGGGAGGAGTACCTGCAGGTCGTGGGTGCCATGTGCCAGGAGCTCCAGGCCGCACGGT ACAACGGCAGCTACTTTGACCGGGGGGCTAAGGCAGGCCGCCGGCTCTGCACGCCCGAAG GCTGGTTCTCCTGCCAGGGTCCTTTTGACACGGACGACTGTGCCTCCAGACACTCCATCA ACCCCTACGGGAACAGGGAGAGCCGCATCCTCTTCAGCACCTGGAACCTGGACCACATAA TAGAGAAGAAGCGCACAGTGGTCCCCACGCTGGCTGCAGCCGTCGGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATGCGTACAAGGCGGGATCAGCCGCCACATCCTCCGACCTTCTGGGTAATGTAGTTTCT GGAGGGAGGCGCTCAGCCTTGATTTCCCCAGTCGTGGAGCCCACCTGAGCGGACCCCAGG CTGGGCCAGCCAAGCAGGTGCTGTCCGCGGGGCCAGAGGCTCTGAGGATGTCTGCGGTGT CCCGGAAACCCAAGACGTTCAAGCTGCGGGCCCTGCACAGCCAGAAGAAGTTTGGGGTGG CAGGCAGGAGCTGCGAGGAAGTGCTGCGGAAGGGGTGCCTCCACTTACAGCTCCCTGTGC CCGGCTCCCGCCTGTGCCTCTATGAGGACGGCACGGAGGTGACTGAAGATTACTTCTGGA GTATCCCCGATGACTCGGAGCTAGTGCTTCTCACCACGGGCCAGACCTGGCAGGGCTATG TGAGTGACATCAGCCACTTCCTGAGCGTGTTCCAGAAGCCGCACGCTGGGGTGATCCAGG CTGCCCGGCAGCTGCTGTCCGACGAGCGGGCCCCGCTGCGGCAGAAGCTCCTGGCCGACC TCCTGGGCACCGTCAGCGAGAACATCGCGGCCGAGACCAGGGCCGAGGACCCGCCGTGGT TTGAAGGTCTGGAGGCCCGATTTAGGAGTAAGTCTGCCTACCTGAGGTACAGCTGCGAGA GCCGGATCCGAAGCTACCTGAGAGAGGTGACCTCATGCGCCTCCTTGGTCAGTGTGGCAG CTCGGGAGGAGTACCTGCAGGTCGTGGGTGCCATGTGCCAGGAGCTCCAGGCCGCACGGT ACAACGGCAGCTACTTTGACCGGGGGGCTAAGGCAGGCCGCCGGCTCTGCACGCCCGAAG GCTGGTTCTCCTGCCAGGGTCCTTTTGACACGGACGACTGTGCCTCCAGACACTCCATCA ACCCCTACGGGAACAGGGAGAGCCGCATCCTCTTCAGCACCTGGAACCTGGACCACATAA TAGAGAAGAAGCGCACAGTGGTCCCCACGCTGGCTGCAGCCGTCGGCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 3-299, gnl|bosTau2|chr16 (35330674-35330381) | |
| 3-299, gnl|Hg17|chr1 (3797129-3797448) | |
| 420-608, gnl|bosTau2|chr16 (35325568-35325380) | |
| 420-608, gnl|canFam2|chr5 (61348591-61348813) | |
| 420-608, gnl|canFam2|chr5 (61348808-61348619) | |
| 420-608, gnl|danRer3|chrUn (140457772-140457996) | |
| 420-608, gnl|echTel1|scaffold_302888 (4292-4075) | |
| 420-608, gnl|echTel1|scaffold_302888 (4086-4272) | |
| 420-608, gnl|fr1|chrUn (78796415-78796646) | |
| 420-608, gnl|galGal2|chr21 (824491-824295) | |
| 420-608, gnl|hg17|chr1 (3805492-3805731) | |
| 420-608, gnl|Hg17|chr1 (3805535-3805723) | |
| 420-608, gnl|hg17|chr9 (32556729-32556920) | |
| 420-608, gnl|loxAfr1|scaffold_44368 (35217-35403) | |
| 420-608, gnl|loxAfr1|scaffold_64691 (9463-9703) | |
| 420-608, gnl|mm7|chr4 (152962537-152962314) | |
| 420-608, gnl|mm7|chr4 (152962322-152962511) | |
| 420-608, gnl|Mm7|chr4 (152962508-152962320) | |
| 420-608, gnl|monDom2|scaffold_78 (6342663-6342438) | |
| 420-608, gnl|oryCun1|scaffold_147502 (770-545) | |
| 420-608, gnl|oryCun1|scaffold_147502 (555-744) | |
| 420-608, gnl|panTro1|chr1 (3663884-3664123) | |
| 420-608, gnl|panTro1|chr11 (33048654-33048845) | |
| 420-608, gnl|rheMac2|chr1 (6839767-6840007) | |
| 420-608, gnl|rheMac2|chr15 (44655606-44655416) | |
| 420-608, gnl|rn3|chr5 (170770723-170770500) | |
| 420-608, gnl|rn3|chr5 (170770508-170770697) | |
| 685-858, gnl|bosTau2|chr16 (35323419-35323246) | |
| 685-858, gnl|Hg17|chr1 (3809324-3809497) | |
| 685-858, gnl|Mm7|chr4 (152959655-152959482) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-299, gnl|bosTau2|chr16 (35330674-35330381) | |
| 3-299, gnl|Hg17|chr1 (3797129-3797448) | |
| 420-608, gnl|bosTau2|chr16 (35325568-35325380) | |
| 420-608, gnl|canFam2|chr5 (61348591-61348813) | |
| 420-608, gnl|canFam2|chr5 (61348808-61348619) | |
| 420-608, gnl|danRer3|chrUn (140457772-140457996) | |
| 420-608, gnl|echTel1|scaffold_302888 (4292-4075) | |
| 420-608, gnl|echTel1|scaffold_302888 (4086-4272) | |
| 420-608, gnl|fr1|chrUn (78796415-78796646) | |
| 420-608, gnl|galGal2|chr21 (824491-824295) | |
| 420-608, gnl|hg17|chr1 (3805492-3805731) | |
| 420-608, gnl|Hg17|chr1 (3805535-3805723) | |
| 420-608, gnl|hg17|chr9 (32556729-32556920) | |
| 420-608, gnl|loxAfr1|scaffold_44368 (35217-35403) | |
| 420-608, gnl|loxAfr1|scaffold_64691 (9463-9703) | |
| 420-608, gnl|mm7|chr4 (152962537-152962314) | |
| 420-608, gnl|mm7|chr4 (152962322-152962511) | |
| 420-608, gnl|Mm7|chr4 (152962508-152962320) | |
| 420-608, gnl|monDom2|scaffold_78 (6342663-6342438) | |
| 420-608, gnl|oryCun1|scaffold_147502 (770-545) | |
| 420-608, gnl|oryCun1|scaffold_147502 (555-744) | |
| 420-608, gnl|panTro1|chr1 (3663884-3664123) | |
| 420-608, gnl|panTro1|chr11 (33048654-33048845) | |
| 420-608, gnl|rheMac2|chr1 (6839767-6840007) | |
| 420-608, gnl|rheMac2|chr15 (44655606-44655416) | |
| 420-608, gnl|rn3|chr5 (170770723-170770500) | |
| 420-608, gnl|rn3|chr5 (170770508-170770697) | |
| 685-858, gnl|bosTau2|chr16 (35323419-35323246) | |
| 685-858, gnl|Hg17|chr1 (3809324-3809497) | |
| 685-858, gnl|Mm7|chr4 (152959655-152959482) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |