Non-Coding RNA Search

Ss1.1-Ova1-OVRM10008C12.5

Sequence:


               
               AGAAAATACTGAAGACAGGTGCAATTAACTAAACTTTTGTTTTTAGCCATTGTAGAGGCT
GCATTAGAGTAGAATGTTTATAACAACAGAGCAGCTAAGATGATAAGGAAGTAAGACTAG
TGCTGAGTTGAGAAATGGGTCATTAACACCCTGTGCCAAGGATGCCAAGCTGCCGGTGAG
GCCTGCGTCCCCCCCCCGTAACCCAGTGCTTCTGGGTGGGTATCACAACTTCCCGGCTCC
AATTTTGGTTCCATGTTTTTCCCTCTTTGTTGGTTGCTTTGGTGCAGTGACAGTGGGTAT
GTTATGCTGTTTTCCTTCTCTCATCAAAAGAGAGGAATTTCCAAAAGTTTATTGTTAAAA
ATATTGACCTTTCCATAAACAGGTTTTCCAAGGTATGCTATTTCTTAAATTTATTCATTA
TTTCCCTCTAGTATAATGAATGGGATGAATTCACTTGAAGTATCTCATGAAATGATGTAT
GTTGCACAAATAAAAATTGAACCTCTTTTGAACTGCAGAAATACTTTTGACCAGTACATC
TTGGGAATTTGAAAATTAAGATTTACTTTGTCAGGAGTTCCTGTCATGGCTCAGTGGTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAAATACTGAAGACAGGTGCAATTAACTAAACTTTTGTTTTTAGCCATTGTAGAGGCT
GCATTAGAGTAGAATGTTTATAACAACAGAGCAGCTAAGATGATAAGGAAGTAAGACTAG
TGCTGAGTTGAGAAATGGGTCATTAACACCCTGTGCCAAGGATGCCAAGCTGCCGGTGAG
GCCTGCGTCCCCCCCCCGTAACCCAGTGCTTCTGGGTGGGTATCACAACTTCCCGGCTCC
AATTTTGGTTCCATGTTTTTCCCTCTTTGTTGGTTGCTTTGGTGCAGTGACAGTGGGTAT
GTTATGCTGTTTTCCTTCTCTCATCAAAAGAGAGGAATTTCCAAAAGTTTATTGTTAAAA
ATATTGACCTTTCCATAAACAGGTTTTCCAAGGTATGCTATTTCTTAAATTTATTCATTA
TTTCCCTCTAGTATAATGAATGGGATGAATTCACTTGAAGTATCTCATGAAATGATGTAT
GTTGCACAAATAAAAATTGAACCTCTTTTGAACTGCAGAAATACTTTTGACCAGTACATC
TTGGGAATTTGAAAATTAAGATTTACTTTGTCAGGAGTTCCTGTCATGGCTCAGTGGTAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-555, gnl|bosTau2|chr19 (9858965-9859531)
               

               
               2-555, gnl|Hg17|chr17 (26727093-26727624)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-555, gnl|bosTau2|chr19 (9858965-9859531)
               

               
               2-555, gnl|Hg17|chr17 (26727093-26727624)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               cty (0.10408)

	2-555, gnl\|bosTau2\|chr19 (9858965-9859531)
	2-555, gnl\|Hg17\|chr17 (26727093-26727624)