Ss1.1-Ova1-OVRM10009G09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCGGACGCCGGTGAGGGGGCGTGTTCCCCGTGCCCGGCGGCTGCCCGCGGGACCCCCG AGGGCCCTCCCGGGCTCCCGGTGCGACCATGGCGCGGAGCCTCCGGAACTGGCTGGGCGG CTGCCTACTGGTGTCAGCATTAGGAATGGTGGTGCCACCTCCTGAAAACGTCAGAATGAA TTCAGTTAATTTCAAGAACATTCTCCAGTGGGACTCACCTGCTTTTCCCCAGGGGGATCT GACCTTCACAGCTCAGTATCACAGTTATAGGCAATTCCAGGATCAGTGTGTGAGCATCAT CTTGACGGAGTGTGATTTCTCAAGTCTTTCCAAGTACGGTGACCACATCTTAAGAGTCAG GGCTGAATTTGCAGACGAGCATTCAGACTGGATAAACATCACCTTCTGTCCTGTGGATGA CACCATTATTGGACCTCCTGGAATGCAAGTAGAGGCACTTGCGAATTCTTTACATATGCG TTTCTTAGCCCCCAAAATTGAGAATGAACCTGAAACATGGACTGTGAGGAATATTTATAA CTCATGGGCTTATCATGTGCAATATTGGAAGAATGGCTCCGATGAAAAGTTTGCAGTTAC CGCCCAGTATGACTTCGAGGTCCTTCGAAATCTGGAGTCATCCACAACTTACTGTGTTCA AGTCCGAGCGTTTCTTCCCGATCGGAACAAAACCGGGGAATGGAGTGATCCTGTCTGTGG GCAGACGACCAATGACGAAACCACCCCCACCTGGATCGTGGCCTGTGTCCTGGCCGCCTC GGTGGTCGCCGCCTTCCTGCTGCTCCTCGGCTGCTTCATCTTGCTGCGGTGCATTTACAA GAAGACCAAGAACGCCTTCCCCCCCAGGAATTCTCTCCCACAGCACCTGAAGGAGTTTTT GAGCCACCCCCATCACAGCACCCTTCTCTTATTCTCCATCCCACTGTCTGATGAGAATGA AGTTTTTGACAAGCTGAGTGTCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCGGACGCCGGTGAGGGGGCGTGTTCCCCGTGCCCGGCGGCTGCCCGCGGGACCCCCG AGGGCCCTCCCGGGCTCCCGGTGCGACCATGGCGCGGAGCCTCCGGAACTGGCTGGGCGG CTGCCTACTGGTGTCAGCATTAGGAATGGTGGTGCCACCTCCTGAAAACGTCAGAATGAA TTCAGTTAATTTCAAGAACATTCTCCAGTGGGACTCACCTGCTTTTCCCCAGGGGGATCT GACCTTCACAGCTCAGTATCACAGTTATAGGCAATTCCAGGATCAGTGTGTGAGCATCAT CTTGACGGAGTGTGATTTCTCAAGTCTTTCCAAGTACGGTGACCACATCTTAAGAGTCAG GGCTGAATTTGCAGACGAGCATTCAGACTGGATAAACATCACCTTCTGTCCTGTGGATGA CACCATTATTGGACCTCCTGGAATGCAAGTAGAGGCACTTGCGAATTCTTTACATATGCG TTTCTTAGCCCCCAAAATTGAGAATGAACCTGAAACATGGACTGTGAGGAATATTTATAA CTCATGGGCTTATCATGTGCAATATTGGAAGAATGGCTCCGATGAAAAGTTTGCAGTTAC CGCCCAGTATGACTTCGAGGTCCTTCGAAATCTGGAGTCATCCACAACTTACTGTGTTCA AGTCCGAGCGTTTCTTCCCGATCGGAACAAAACCGGGGAATGGAGTGATCCTGTCTGTGG GCAGACGACCAATGACGAAACCACCCCCACCTGGATCGTGGCCTGTGTCCTGGCCGCCTC GGTGGTCGCCGCCTTCCTGCTGCTCCTCGGCTGCTTCATCTTGCTGCGGTGCATTTACAA GAAGACCAAGAACGCCTTCCCCCCCAGGAATTCTCTCCCACAGCACCTGAAGGAGTTTTT GAGCCACCCCCATCACAGCACCCTTCTCTTATTCTCCATCCCACTGTCTGATGAGAATGA AGTTTTTGACAAGCTGAGTGTCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 18-137, gnl|bosTau2|chr1 (1869003-1868878) | |
| 18-137, gnl|canFam2|chr31 (30909840-30910353) | |
| 18-137, gnl|echTel1|scaffold_287150 (45038-44679) | |
| 18-137, gnl|hg17|chr21 (33560454-33560764) | |
| 18-137, gnl|mm7|chr16 (91456825-91457060) | |
| 18-137, gnl|Mm7|chr16 (91456846-91456975) | |
| 18-137, gnl|oryCun1|scaffold_194180 (19619-19346) | |
| 18-137, gnl|panTro1|chr22 (33533449-33533759) | |
| 18-137, gnl|rheMac2|chr3 (13290582-13290266) | |
| 263-422, gnl|bosTau2|chr1 (1861918-1861759) | |
| 263-422, gnl|Hg17|chr21 (33570769-33570928) | |
| 263-422, gnl|Mm7|chr16 (91462484-91462643) | |
| 423-589, gnl|bosTau2|chr1 (1860262-1860096) | |
| 423-589, gnl|Hg17|chr21 (33573927-33574093) | |
| 423-589, gnl|Mm7|chr16 (91465216-91465382) | |
| 737-895, gnl|bosTau2|chr1 (1847501-1847343) | |
| 737-895, gnl|canFam2|chr31 (30926775-30927272) | |
| 737-895, gnl|echTel1|scaffold_287150 (30386-29848) | |
| 737-895, gnl|hg17|chr21 (33582202-33582752) | |
| 737-895, gnl|Hg17|chr21 (33582278-33582436) | |
| 737-895, gnl|loxAfr1|scaffold_38541 (16769-16225) | |
| 737-895, gnl|mm7|chr16 (91472251-91472710) | |
| 737-895, gnl|Mm7|chr16 (91472335-91472493) | |
| 737-895, gnl|oryCun1|scaffold_194180 (1811-1288) | |
| 737-895, gnl|panTro1|chr22 (33555476-33556031) | |
| 737-895, gnl|rheMac2|chr3 (13268687-13268148) | |
| 737-895, gnl|rn3|chr11 (31430864-31431310) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 18-137, gnl|bosTau2|chr1 (1869003-1868878) | |
| 18-137, gnl|canFam2|chr31 (30909840-30910353) | |
| 18-137, gnl|echTel1|scaffold_287150 (45038-44679) | |
| 18-137, gnl|hg17|chr21 (33560454-33560764) | |
| 18-137, gnl|mm7|chr16 (91456825-91457060) | |
| 18-137, gnl|Mm7|chr16 (91456846-91456975) | |
| 18-137, gnl|oryCun1|scaffold_194180 (19619-19346) | |
| 18-137, gnl|panTro1|chr22 (33533449-33533759) | |
| 18-137, gnl|rheMac2|chr3 (13290582-13290266) | |
| 263-422, gnl|bosTau2|chr1 (1861918-1861759) | |
| 263-422, gnl|Hg17|chr21 (33570769-33570928) | |
| 263-422, gnl|Mm7|chr16 (91462484-91462643) | |
| 423-589, gnl|bosTau2|chr1 (1860262-1860096) | |
| 423-589, gnl|Hg17|chr21 (33573927-33574093) | |
| 423-589, gnl|Mm7|chr16 (91465216-91465382) | |
| 737-895, gnl|bosTau2|chr1 (1847501-1847343) | |
| 737-895, gnl|canFam2|chr31 (30926775-30927272) | |
| 737-895, gnl|echTel1|scaffold_287150 (30386-29848) | |
| 737-895, gnl|hg17|chr21 (33582202-33582752) | |
| 737-895, gnl|Hg17|chr21 (33582278-33582436) | |
| 737-895, gnl|loxAfr1|scaffold_38541 (16769-16225) | |
| 737-895, gnl|mm7|chr16 (91472251-91472710) | |
| 737-895, gnl|Mm7|chr16 (91472335-91472493) | |
| 737-895, gnl|oryCun1|scaffold_194180 (1811-1288) | |
| 737-895, gnl|panTro1|chr22 (33555476-33556031) | |
| 737-895, gnl|rheMac2|chr3 (13268687-13268148) | |
| 737-895, gnl|rn3|chr11 (31430864-31431310) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| clu (0.358938) | |
| nlu (0.191681) | |
| pla (0.133672) | |
| cov (0.132153) | |
| ese (0.126502) | |
| jej (0.0989218) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.358938) | |
| nlu (0.191681) | |
| pla (0.133672) | |
| cov (0.132153) | |
| ese (0.126502) | |
| jej (0.0989218) |