Ss1.1-Ova1-OVRM10011D12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGATCACTGCGGCTCCCTGCTCTGGGGGATAATGCGACAAGGACTTCAGTGTAAAATATG TAAAATGAATGTACACATTCGATGTCAGGCAAACGTGGCCCCGAACTGCGGGGTAAACGC GGTGGAGCTAGCCAAGACTCTGGCGGGAATGGGCCTCCAACCTGGAAATATTTCTCCAAC CTCGAAGCTTGTTTCCAGATCGACCCTAAGACGGCAGGGAAAGGAAAGCACCAAAGAAGG AAATGGCATTGGGGTTAATTCTTCCAACCGACTTGGGATTGACAACTTTGAATTCATCCG AGTGTTGGGGAAGGGCAGCTTTGGGAAGGTGATGCTCGCAAGAATAAAAGAAACAGGAGA CCTCTATGCCGTCAAGGTGCTAAAGAAGGACGTTATCCTGCAGGATGACGACGTGGAGTG CACGATGACAGAGAAAAGGATCCTGTCCTTGGCCCGCAATCACCCTTTCCTCACCCAGTT GTTCTGCTGCTTTCAGAGCCCTGATCGTCTGTTTTTTGTGATGGAGTTTGTGAATGGGGG AGACTTGATGTTTCACATTCAGAAGTCACGGCGTTTTGAGGAAGCACGAGCTCGTTTCTA TGCTGCAGAAATCATTTCAGCACTTATGTTCCTGCACGACAAAGGCATCATCTACAGAGA TCTGAAGCTGGACAATGTGCTGTTGGACCATGAAGGTCACTGTAAACTTGCAGACTTTGG GATGTGCAAGGAGGGGATCTGTAACGGGGTCACCACGGCAACCTTCTGTGGCACGCCCGA CTACATTGCTCCAGAGATCCTCCAGGAAATGCTGTACGGGCCTGCAGTAGACTGGTGGGC GATGGGCGTGCTGCTGTACGAGATGCTCTGCGGCCATGCGCCCTTTGAGGCCGAGAATGA AGACGACCTCTTTGAGGCCATACTGAATGATGAAGTGGTCTACCCCACCTGGCTCCATGA AGATGCCGCTGGGATCCTGAAATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGATCACTGCGGCTCCCTGCTCTGGGGGATAATGCGACAAGGACTTCAGTGTAAAATATG TAAAATGAATGTACACATTCGATGTCAGGCAAACGTGGCCCCGAACTGCGGGGTAAACGC GGTGGAGCTAGCCAAGACTCTGGCGGGAATGGGCCTCCAACCTGGAAATATTTCTCCAAC CTCGAAGCTTGTTTCCAGATCGACCCTAAGACGGCAGGGAAAGGAAAGCACCAAAGAAGG AAATGGCATTGGGGTTAATTCTTCCAACCGACTTGGGATTGACAACTTTGAATTCATCCG AGTGTTGGGGAAGGGCAGCTTTGGGAAGGTGATGCTCGCAAGAATAAAAGAAACAGGAGA CCTCTATGCCGTCAAGGTGCTAAAGAAGGACGTTATCCTGCAGGATGACGACGTGGAGTG CACGATGACAGAGAAAAGGATCCTGTCCTTGGCCCGCAATCACCCTTTCCTCACCCAGTT GTTCTGCTGCTTTCAGAGCCCTGATCGTCTGTTTTTTGTGATGGAGTTTGTGAATGGGGG AGACTTGATGTTTCACATTCAGAAGTCACGGCGTTTTGAGGAAGCACGAGCTCGTTTCTA TGCTGCAGAAATCATTTCAGCACTTATGTTCCTGCACGACAAAGGCATCATCTACAGAGA TCTGAAGCTGGACAATGTGCTGTTGGACCATGAAGGTCACTGTAAACTTGCAGACTTTGG GATGTGCAAGGAGGGGATCTGTAACGGGGTCACCACGGCAACCTTCTGTGGCACGCCCGA CTACATTGCTCCAGAGATCCTCCAGGAAATGCTGTACGGGCCTGCAGTAGACTGGTGGGC GATGGGCGTGCTGCTGTACGAGATGCTCTGCGGCCATGCGCCCTTTGAGGCCGAGAATGA AGACGACCTCTTTGAGGCCATACTGAATGATGAAGTGGTCTACCCCACCTGGCTCCATGA AGATGCCGCTGGGATCCTGAAATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 57-184, gnl|bosTau2|chr10 (50126870-50126743) | |
| 57-184, gnl|canFam2|chr8 (39375796-39375959) | |
| 57-184, gnl|danRer3|chr13 (32773219-32773350) | |
| 57-184, gnl|dasNov1|scaffold_9846 (4339-4178) | |
| 57-184, gnl|echTel1|scaffold_319475 (139422-139584) | |
| 57-184, gnl|fr1|chrUn (304450668-304450807) | |
| 57-184, gnl|galGal2|chr5 (50837968-50837789) | |
| 57-184, gnl|hg17|chr14 (60989675-60989838) | |
| 57-184, gnl|Hg17|chr14 (60989697-60989824) | |
| 57-184, gnl|loxAfr1|scaffold_4522 (47333-47495) | |
| 57-184, gnl|mm7|chr12 (71652343-71652503) | |
| 57-184, gnl|Mm7|chr12 (71652362-71652489) | |
| 57-184, gnl|monDom2|scaffold_8 (74281595-74281754) | |
| 57-184, gnl|oryCun1|scaffold_177345 (68658-68820) | |
| 57-184, gnl|panTro1|chr15 (60555337-60555500) | |
| 57-184, gnl|rheMac2|chr7 (124449827-124449985) | |
| 57-184, gnl|rn3|chr6 (96199571-96199731) | |
| 57-184, gnl|tetNig1|chr10 (5656420-5656561) | |
| 57-184, gnl|xenTro1|scaffold_673 (478955-478791) | |
| 315-503, gnl|bosTau2|chr10 (50122874-50122685) | |
| 315-503, gnl|Hg17|chr14 (60993962-60994151) | |
| 315-503, gnl|Mm7|chr12 (71654906-71655094) | |
| 596-739, gnl|bosTau2|chr16 (36709907-36709764) | |
| 596-739, gnl|Hg17|chr1 (2135657-2135800) | |
| 596-739, gnl|Mm7|chr4 (154261145-154261002) | |
| 792-984, gnl|bosTau2|chr10 (50053116-50052924) | |
| 792-984, gnl|canFam2|chr8 (39445603-39445753) | |
| 792-984, gnl|danRer3|chr13 (32787352-32787480) | |
| 792-984, gnl|dasNov1|scaffold_69970 (3920-3770) | |
| 792-984, gnl|echTel1|scaffold_56647 (3475-3617) | |
| 792-984, gnl|fr1|chrUn (304452580-304452721) | |
| 792-984, gnl|galGal2|chr5 (50795894-50795745) | |
| 792-984, gnl|hg17|chr14 (61066852-61067003) | |
| 792-984, gnl|Hg17|chr14 (61066873-61067065) | |
| 792-984, gnl|loxAfr1|scaffold_31684 (8579-8429) | |
| 792-984, gnl|mm7|chr12 (71711709-71711859) | |
| 792-984, gnl|Mm7|chr12 (71711729-71711921) | |
| 792-984, gnl|monDom2|scaffold_8 (74369102-74369256) | |
| 792-984, gnl|oryCun1|scaffold_207235 (1224-1073) | |
| 792-984, gnl|panTro1|chr15 (60632935-60633086) | |
| 792-984, gnl|rheMac2|chr7 (124528686-124528837) | |
| 792-984, gnl|rn3|chr6 (96260843-96260993) | |
| 792-984, gnl|tetNig1|chr10 (5661294-5661427) | |
| 792-984, gnl|xenTro1|scaffold_673 (450618-450460) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 57-184, gnl|bosTau2|chr10 (50126870-50126743) | |
| 57-184, gnl|canFam2|chr8 (39375796-39375959) | |
| 57-184, gnl|danRer3|chr13 (32773219-32773350) | |
| 57-184, gnl|dasNov1|scaffold_9846 (4339-4178) | |
| 57-184, gnl|echTel1|scaffold_319475 (139422-139584) | |
| 57-184, gnl|fr1|chrUn (304450668-304450807) | |
| 57-184, gnl|galGal2|chr5 (50837968-50837789) | |
| 57-184, gnl|hg17|chr14 (60989675-60989838) | |
| 57-184, gnl|Hg17|chr14 (60989697-60989824) | |
| 57-184, gnl|loxAfr1|scaffold_4522 (47333-47495) | |
| 57-184, gnl|mm7|chr12 (71652343-71652503) | |
| 57-184, gnl|Mm7|chr12 (71652362-71652489) | |
| 57-184, gnl|monDom2|scaffold_8 (74281595-74281754) | |
| 57-184, gnl|oryCun1|scaffold_177345 (68658-68820) | |
| 57-184, gnl|panTro1|chr15 (60555337-60555500) | |
| 57-184, gnl|rheMac2|chr7 (124449827-124449985) | |
| 57-184, gnl|rn3|chr6 (96199571-96199731) | |
| 57-184, gnl|tetNig1|chr10 (5656420-5656561) | |
| 57-184, gnl|xenTro1|scaffold_673 (478955-478791) | |
| 315-503, gnl|bosTau2|chr10 (50122874-50122685) | |
| 315-503, gnl|Hg17|chr14 (60993962-60994151) | |
| 315-503, gnl|Mm7|chr12 (71654906-71655094) | |
| 596-739, gnl|bosTau2|chr16 (36709907-36709764) | |
| 596-739, gnl|Hg17|chr1 (2135657-2135800) | |
| 596-739, gnl|Mm7|chr4 (154261145-154261002) | |
| 792-984, gnl|bosTau2|chr10 (50053116-50052924) | |
| 792-984, gnl|canFam2|chr8 (39445603-39445753) | |
| 792-984, gnl|danRer3|chr13 (32787352-32787480) | |
| 792-984, gnl|dasNov1|scaffold_69970 (3920-3770) | |
| 792-984, gnl|echTel1|scaffold_56647 (3475-3617) | |
| 792-984, gnl|fr1|chrUn (304452580-304452721) | |
| 792-984, gnl|galGal2|chr5 (50795894-50795745) | |
| 792-984, gnl|hg17|chr14 (61066852-61067003) | |
| 792-984, gnl|Hg17|chr14 (61066873-61067065) | |
| 792-984, gnl|loxAfr1|scaffold_31684 (8579-8429) | |
| 792-984, gnl|mm7|chr12 (71711709-71711859) | |
| 792-984, gnl|Mm7|chr12 (71711729-71711921) | |
| 792-984, gnl|monDom2|scaffold_8 (74369102-74369256) | |
| 792-984, gnl|oryCun1|scaffold_207235 (1224-1073) | |
| 792-984, gnl|panTro1|chr15 (60632935-60633086) | |
| 792-984, gnl|rheMac2|chr7 (124528686-124528837) | |
| 792-984, gnl|rn3|chr6 (96260843-96260993) | |
| 792-984, gnl|tetNig1|chr10 (5661294-5661427) | |
| 792-984, gnl|xenTro1|scaffold_673 (450618-450460) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) |