Ss1.1-Ova1-OVRM10016D02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGTGTGTGGTGAGGTGAATGTGTGTGGGTGGGTGTGAGGAGAGCCAGGCCAACCACGCG GCTGTGAGAAAGGGGGCGAGTGGGCGAGGACGCCCGGCCTGGCTGCGGGAGCCGCTGCGG CGGCGGCGGCGGCGGCGGCGGAGAAAGGAGGCGGCTCCCGGCATCCCGACCCCCTCCCCC GCCTCTCCTTCTTGGACTTCCAGCCCCTTGGCCGCCCGCGCTGCCCTCGGAGGCCCCAGC CCGGCGCCGCCGGCAGAGAGTGAGGGAGGAGCCGCCCAAGCCAGAGTTTACATTCAGGAG GAAATAATCCCGGAAAAGGAAAAACAGGCAGATCAAGATGTGTAGCTCTGTGGCTGCCAA GTTATGGTTTTTGACAGATCGTCGAATCAGGGAAGACTATCCCCAGAAAGAGATCTTACG AGCATTAAAGGCCAAATGTTGTGAAGAGGAACTGGACTTTAGGGCTGTGGTGATGGACGA GGTGGTGCTAACAATTGAGCAAGGAAACCTAGGTCTTCGGATCAATGGGGAATTAATTAC TGCCTACCCCCAGGTGGTGGTAGTTAGAGTACCAACCCCATGGGTGCAAAGTGATAGTGA CATCACTGTTTTGCGCCATCTAGAGAAAATGGGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGTGTGTGGTGAGGTGAATGTGTGTGGGTGGGTGTGAGGAGAGCCAGGCCAACCACGCG GCTGTGAGAAAGGGGGCGAGTGGGCGAGGACGCCCGGCCTGGCTGCGGGAGCCGCTGCGG CGGCGGCGGCGGCGGCGGCGGAGAAAGGAGGCGGCTCCCGGCATCCCGACCCCCTCCCCC GCCTCTCCTTCTTGGACTTCCAGCCCCTTGGCCGCCCGCGCTGCCCTCGGAGGCCCCAGC CCGGCGCCGCCGGCAGAGAGTGAGGGAGGAGCCGCCCAAGCCAGAGTTTACATTCAGGAG GAAATAATCCCGGAAAAGGAAAAACAGGCAGATCAAGATGTGTAGCTCTGTGGCTGCCAA GTTATGGTTTTTGACAGATCGTCGAATCAGGGAAGACTATCCCCAGAAAGAGATCTTACG AGCATTAAAGGCCAAATGTTGTGAAGAGGAACTGGACTTTAGGGCTGTGGTGATGGACGA GGTGGTGCTAACAATTGAGCAAGGAAACCTAGGTCTTCGGATCAATGGGGAATTAATTAC TGCCTACCCCCAGGTGGTGGTAGTTAGAGTACCAACCCCATGGGTGCAAAGTGATAGTGA CATCACTGTTTTGCGCCATCTAGAGAAAATGGGATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 284-514, gnl|bosTau2|chr5 (59701775-59701546) | |
| 284-514, gnl|canFam2|chr27 (40005067-40005218) | |
| 284-514, gnl|canFam2|chr27 (40005288-40005052) | |
| 284-514, gnl|echTel1|scaffold_163028 (433-282) | |
| 284-514, gnl|echTel1|scaffold_163028 (213-447) | |
| 284-514, gnl|galGal2|chr1 (68477597-68477369) | |
| 284-514, gnl|hg17|chr1 (215762277-215762416) | |
| 284-514, gnl|hg17|chr12 (8757682-8757918) | |
| 284-514, gnl|Hg17|chr12 (8757682-8757906) | |
| 284-514, gnl|loxAfr1|scaffold_8500 (56836-56987) | |
| 284-514, gnl|loxAfr1|scaffold_8500 (57056-56821) | |
| 284-514, gnl|mm7|chr6 (122509715-122509865) | |
| 284-514, gnl|mm7|chr6 (122509926-122509699) | |
| 284-514, gnl|Mm7|chr6 (122509911-122509707) | |
| 284-514, gnl|monDom2|scaffold_31 (12029510-12029660) | |
| 284-514, gnl|monDom2|scaffold_31 (12029725-12029500) | |
| 284-514, gnl|oryCun1|scaffold_112356 (4083-4234) | |
| 284-514, gnl|oryCun1|scaffold_112356 (4291-4077) | |
| 284-514, gnl|panTro1|chr1 (199506430-199506569) | |
| 284-514, gnl|panTro1|chrUn_random (58345017-58344781) | |
| 284-514, gnl|rheMac2|chr1 (151192505-151192363) | |
| 284-514, gnl|rheMac2|chr11 (8858026-8858260) | |
| 284-514, gnl|rn3|chr4 (187245697-187245848) | |
| 284-514, gnl|rn3|chr4 (159165406-159165179) | |
| 284-514, gnl|xenTro1|scaffold_980 (47958-47811) | |
| 284-514, gnl|xenTro1|scaffold_980 (47753-47968) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 284-514, gnl|bosTau2|chr5 (59701775-59701546) | |
| 284-514, gnl|canFam2|chr27 (40005067-40005218) | |
| 284-514, gnl|canFam2|chr27 (40005288-40005052) | |
| 284-514, gnl|echTel1|scaffold_163028 (433-282) | |
| 284-514, gnl|echTel1|scaffold_163028 (213-447) | |
| 284-514, gnl|galGal2|chr1 (68477597-68477369) | |
| 284-514, gnl|hg17|chr1 (215762277-215762416) | |
| 284-514, gnl|hg17|chr12 (8757682-8757918) | |
| 284-514, gnl|Hg17|chr12 (8757682-8757906) | |
| 284-514, gnl|loxAfr1|scaffold_8500 (56836-56987) | |
| 284-514, gnl|loxAfr1|scaffold_8500 (57056-56821) | |
| 284-514, gnl|mm7|chr6 (122509715-122509865) | |
| 284-514, gnl|mm7|chr6 (122509926-122509699) | |
| 284-514, gnl|Mm7|chr6 (122509911-122509707) | |
| 284-514, gnl|monDom2|scaffold_31 (12029510-12029660) | |
| 284-514, gnl|monDom2|scaffold_31 (12029725-12029500) | |
| 284-514, gnl|oryCun1|scaffold_112356 (4083-4234) | |
| 284-514, gnl|oryCun1|scaffold_112356 (4291-4077) | |
| 284-514, gnl|panTro1|chr1 (199506430-199506569) | |
| 284-514, gnl|panTro1|chrUn_random (58345017-58344781) | |
| 284-514, gnl|rheMac2|chr1 (151192505-151192363) | |
| 284-514, gnl|rheMac2|chr11 (8858026-8858260) | |
| 284-514, gnl|rn3|chr4 (187245697-187245848) | |
| 284-514, gnl|rn3|chr4 (159165406-159165179) | |
| 284-514, gnl|xenTro1|scaffold_980 (47958-47811) | |
| 284-514, gnl|xenTro1|scaffold_980 (47753-47968) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |