Ss1.1-Ova1-OVRM10017D08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGTTATCAGCTCGTCATTTTGTCTATCAATGAAGTGACCTCGAAGCGAGCACACATGTT GATTGACATGCACTTTCGGAGTCTGCGCACTAAGCTGTCTCTGATACTGAGAAATGAAGA AGCCAGTAAGCAGCTAGAGAGTTCAAGGTAACTTGCCTCAAGGTTTCATGAACAGTTTAT CGTACGAGAAGATCTGATGGGTCTAGCTATTGGTACTCATGGTGCTAATATTCAGCAAGC TAGGAAGGTACCTGGGGTCACTGCTATCGATCTCGATGAAGATACCTGCACGTTTCATAT TTATGGAGAGGATCAGGATGCAGTGAAAAAGGCTCGAAGCTTTCTTGAATTTGCCGAAGA TGTCATACAAGTTCCAAGGAACTTAGTAGGCAAAGTAATAGGGAAAAATGGAAAACTGAT TCAGGAGATTGTGGACAAATCAGGAGTCGTGAGGGTGAGAATTGAGGCTGAAAATGAGAA AAATGTTCCGCAAGAAGAGGAAATTATGCCACCAAATTCCCTACCTTCCAGTAACTCACG GGTTGGACCTACTCCCTCAGAAGAAAAAAAACATATAGATATAAAGGAAAACAGCACTCA TTTTTCTCAACCTAACAGCACAAAAGTCCAGAGGGGTATGGTACCGTTTGTTTTTGTGGG AACAAAGGACAGCATCGCTAATGCCACTGTTCTTTTGGATTATCATCTGAACTATTTAAA GGAAGTAGACCAGTTGCGTTTGGAGAGATTACAAATTGATGAGCAGTTGCGACAGATTGG AGCTAGTTCTAGACCACCACCAAATCGTACAGATAAGGAAAAAGGCTATGTGACTGATGA TGGTCAAGGAATGGGTCGAGGTAGTAGACCTTACAGAAATAGGGGGCACGGCAGACGCGG TCCTGGATATACTTCAGCTCCAACAGAGGAAGAGAGGGAGAACTTCCTGCGCAGAGGAGA CGGGCGACGGCGTGGAGGTGGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGTTATCAGCTCGTCATTTTGTCTATCAATGAAGTGACCTCGAAGCGAGCACACATGTT GATTGACATGCACTTTCGGAGTCTGCGCACTAAGCTGTCTCTGATACTGAGAAATGAAGA AGCCAGTAAGCAGCTAGAGAGTTCAAGGTAACTTGCCTCAAGGTTTCATGAACAGTTTAT CGTACGAGAAGATCTGATGGGTCTAGCTATTGGTACTCATGGTGCTAATATTCAGCAAGC TAGGAAGGTACCTGGGGTCACTGCTATCGATCTCGATGAAGATACCTGCACGTTTCATAT TTATGGAGAGGATCAGGATGCAGTGAAAAAGGCTCGAAGCTTTCTTGAATTTGCCGAAGA TGTCATACAAGTTCCAAGGAACTTAGTAGGCAAAGTAATAGGGAAAAATGGAAAACTGAT TCAGGAGATTGTGGACAAATCAGGAGTCGTGAGGGTGAGAATTGAGGCTGAAAATGAGAA AAATGTTCCGCAAGAAGAGGAAATTATGCCACCAAATTCCCTACCTTCCAGTAACTCACG GGTTGGACCTACTCCCTCAGAAGAAAAAAAACATATAGATATAAAGGAAAACAGCACTCA TTTTTCTCAACCTAACAGCACAAAAGTCCAGAGGGGTATGGTACCGTTTGTTTTTGTGGG AACAAAGGACAGCATCGCTAATGCCACTGTTCTTTTGGATTATCATCTGAACTATTTAAA GGAAGTAGACCAGTTGCGTTTGGAGAGATTACAAATTGATGAGCAGTTGCGACAGATTGG AGCTAGTTCTAGACCACCACCAAATCGTACAGATAAGGAAAAAGGCTATGTGACTGATGA TGGTCAAGGAATGGGTCGAGGTAGTAGACCTTACAGAAATAGGGGGCACGGCAGACGCGG TCCTGGATATACTTCAGCTCCAACAGAGGAAGAGAGGGAGAACTTCCTGCGCAGAGGAGA CGGGCGACGGCGTGGAGGTGGAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 138-311, gnl|bosTau2|chrX (10795781-10795608) | |
| 138-311, gnl|canFam2|chrX (119339518-119339709) | |
| 138-311, gnl|danRer3|chr14 (16737775-16737584) | |
| 138-311, gnl|dasNov1|scaffold_228821 (4070-4261) | |
| 138-311, gnl|echTel1|scaffold_312966 (42824-42633) | |
| 138-311, gnl|fr1|chrUn (292254266-292254079) | |
| 138-311, gnl|galGal2|chr4 (18420228-18420030) | |
| 138-311, gnl|hg17|chrX (146719475-146719666) | |
| 138-311, gnl|Hg17|chrX (146719488-146719661) | |
| 138-311, gnl|loxAfr1|scaffold_10062 (27731-27541) | |
| 138-311, gnl|mm7|chrX (64094635-64094826) | |
| 138-311, gnl|Mm7|chrX (64094648-64094821) | |
| 138-311, gnl|monDom2|scaffold_84 (944407-944598) | |
| 138-311, gnl|oryCun1|scaffold_204119 (101014-100823) | |
| 138-311, gnl|panTro1|chrX (151898783-151898974) | |
| 138-311, gnl|rheMac2|chrX (146043982-146044173) | |
| 138-311, gnl|rn3|chrX (154848052-154848243) | |
| 138-311, gnl|tetNig1|chrUn_random (135192365-135192183) | |
| 138-311, gnl|xenTro1|scaffold_269 (1254123-1253935) | |
| 498-635, gnl|bosTau2|chrX (10790589-10790452) | |
| 498-635, gnl|canFam2|chrX (119344442-119344558) | |
| 498-635, gnl|dasNov1|scaffold_9878 (46346-46224) | |
| 498-635, gnl|echTel1|scaffold_312966 (37286-37148) | |
| 498-635, gnl|hg17|chrX (146724504-146724627) | |
| 498-635, gnl|Hg17|chrX (146724529-146724666) | |
| 498-635, gnl|loxAfr1|scaffold_137900 (9246-9123) | |
| 498-635, gnl|mm7|chrX (64099811-64099932) | |
| 498-635, gnl|Mm7|chrX (64099837-64099971) | |
| 498-635, gnl|monDom2|scaffold_84 (950605-950730) | |
| 498-635, gnl|oryCun1|scaffold_204119 (84535-84412) | |
| 498-635, gnl|panTro1|chrX (151903810-151903933) | |
| 498-635, gnl|rheMac2|chrX (146048770-146048893) | |
| 498-635, gnl|rn3|chrX (154852797-154852915) | |
| 700-923, gnl|bosTau2|chrX (10784856-10784633) | |
| 700-923, gnl|Hg17|chrX (146730175-146730398) | |
| 700-923, gnl|Mm7|chrX (64105152-64105375) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 138-311, gnl|bosTau2|chrX (10795781-10795608) | |
| 138-311, gnl|canFam2|chrX (119339518-119339709) | |
| 138-311, gnl|danRer3|chr14 (16737775-16737584) | |
| 138-311, gnl|dasNov1|scaffold_228821 (4070-4261) | |
| 138-311, gnl|echTel1|scaffold_312966 (42824-42633) | |
| 138-311, gnl|fr1|chrUn (292254266-292254079) | |
| 138-311, gnl|galGal2|chr4 (18420228-18420030) | |
| 138-311, gnl|hg17|chrX (146719475-146719666) | |
| 138-311, gnl|Hg17|chrX (146719488-146719661) | |
| 138-311, gnl|loxAfr1|scaffold_10062 (27731-27541) | |
| 138-311, gnl|mm7|chrX (64094635-64094826) | |
| 138-311, gnl|Mm7|chrX (64094648-64094821) | |
| 138-311, gnl|monDom2|scaffold_84 (944407-944598) | |
| 138-311, gnl|oryCun1|scaffold_204119 (101014-100823) | |
| 138-311, gnl|panTro1|chrX (151898783-151898974) | |
| 138-311, gnl|rheMac2|chrX (146043982-146044173) | |
| 138-311, gnl|rn3|chrX (154848052-154848243) | |
| 138-311, gnl|tetNig1|chrUn_random (135192365-135192183) | |
| 138-311, gnl|xenTro1|scaffold_269 (1254123-1253935) | |
| 498-635, gnl|bosTau2|chrX (10790589-10790452) | |
| 498-635, gnl|canFam2|chrX (119344442-119344558) | |
| 498-635, gnl|dasNov1|scaffold_9878 (46346-46224) | |
| 498-635, gnl|echTel1|scaffold_312966 (37286-37148) | |
| 498-635, gnl|hg17|chrX (146724504-146724627) | |
| 498-635, gnl|Hg17|chrX (146724529-146724666) | |
| 498-635, gnl|loxAfr1|scaffold_137900 (9246-9123) | |
| 498-635, gnl|mm7|chrX (64099811-64099932) | |
| 498-635, gnl|Mm7|chrX (64099837-64099971) | |
| 498-635, gnl|monDom2|scaffold_84 (950605-950730) | |
| 498-635, gnl|oryCun1|scaffold_204119 (84535-84412) | |
| 498-635, gnl|panTro1|chrX (151903810-151903933) | |
| 498-635, gnl|rheMac2|chrX (146048770-146048893) | |
| 498-635, gnl|rn3|chrX (154852797-154852915) | |
| 700-923, gnl|bosTau2|chrX (10784856-10784633) | |
| 700-923, gnl|Hg17|chrX (146730175-146730398) | |
| 700-923, gnl|Mm7|chrX (64105152-64105375) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bla (0.124347) | |
| cty (0.10408) |