Ss1.1-Ova1-OVRM10018E08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGATTTCTAAGTCCATGTGTCCAGGGCTGCCAGAAAGGAGGTATGTGCCGTTCGTGCTA TTTCCAGGCGACTTCACCTCTGGGCGTGGCGGATGGTTGCACGCCTGTCTCTCTCAGCAC TGTTCTCCTCTCCTTGGCTGGATTGCATTAAAACCTCTGGAAGGGGTGCATTCCTGAGTC CCGGAGCCTCTCCCCTGGGGACGTGGTCCTGCTGTGGGTACTTCGTTCTTGGAGGAAGAG CAGCCTCCCAGCATGGACCTCGTCGGGCTGCTCAAGTCTCAGTTCCTGTGCCACCTGGTC TTCTGTTACGTATTCATCGCCTCGGGTCTCATCATAAACACCATTCAGCTCTTCACGCTC CTCCTCTGGCCCATAAACAAGCAGCTCTTCAGAAGGATCAACTGCCGGCTGTCTTACTGC ATCTCCAGCCAGCTGGTGATGCTGCTGGAGTGGTGGTCGGGCACGGAGTGCGTCATCCAC ACGGACCCCCGGGCGTACCCCAAGTATGGCAAGGAGAACGCCATCGTCGTTCTGAACCAC AAGTTTGAGATCGACTTTCTCTGTGGTTGGAGCCTGGCCGAACGCTTCGGGGTCTTAGGG GGCTCCAAAGTCCTGGCCAAGAAGGAGCTGGCCTACGTCCCCATAATCGGCTGGATGTGG TACTTCACCGAGATGGTCTTCTGCACGCGCAAGTGGGAGCAGGACCGCAAGACCGTCTCC CGGAGCCTGCTGCACCTGCGCGATTACCCGGAGAAGTACTTCTTCCTGATTCACTGCGAG GGCACGCGGTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGATTTCTAAGTCCATGTGTCCAGGGCTGCCAGAAAGGAGGTATGTGCCGTTCGTGCTA TTTCCAGGCGACTTCACCTCTGGGCGTGGCGGATGGTTGCACGCCTGTCTCTCTCAGCAC TGTTCTCCTCTCCTTGGCTGGATTGCATTAAAACCTCTGGAAGGGGTGCATTCCTGAGTC CCGGAGCCTCTCCCCTGGGGACGTGGTCCTGCTGTGGGTACTTCGTTCTTGGAGGAAGAG CAGCCTCCCAGCATGGACCTCGTCGGGCTGCTCAAGTCTCAGTTCCTGTGCCACCTGGTC TTCTGTTACGTATTCATCGCCTCGGGTCTCATCATAAACACCATTCAGCTCTTCACGCTC CTCCTCTGGCCCATAAACAAGCAGCTCTTCAGAAGGATCAACTGCCGGCTGTCTTACTGC ATCTCCAGCCAGCTGGTGATGCTGCTGGAGTGGTGGTCGGGCACGGAGTGCGTCATCCAC ACGGACCCCCGGGCGTACCCCAAGTATGGCAAGGAGAACGCCATCGTCGTTCTGAACCAC AAGTTTGAGATCGACTTTCTCTGTGGTTGGAGCCTGGCCGAACGCTTCGGGGTCTTAGGG GGCTCCAAAGTCCTGGCCAAGAAGGAGCTGGCCTACGTCCCCATAATCGGCTGGATGTGG TACTTCACCGAGATGGTCTTCTGCACGCGCAAGTGGGAGCAGGACCGCAAGACCGTCTCC CGGAGCCTGCTGCACCTGCGCGATTACCCGGAGAAGTACTTCTTCCTGATTCACTGCGAG GGCACGCGGTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 165-430, gnl|bosTau2|chr9 (59000168-58999904) | |
| 165-430, gnl|canFam2|chr1 (52844034-52844219) | |
| 165-430, gnl|canFam2|chr31 (40197527-40197715) | |
| 165-430, gnl|danRer3|chr1 (48188897-48188711) | |
| 165-430, gnl|danRer3|chr13 (38419485-38419302) | |
| 165-430, gnl|dasNov1|scaffold_99651 (43026-42833) | |
| 165-430, gnl|echTel1|scaffold_246379 (1361-1171) | |
| 165-430, gnl|echTel1|scaffold_296952 (119837-119652) | |
| 165-430, gnl|fr1|chrUn (50778072-50777876) | |
| 165-430, gnl|fr1|chrUn (160710296-160710111) | |
| 165-430, gnl|galGal2|chr1 (103927701-103927893) | |
| 165-430, gnl|galGal2|chr3 (41309414-41309229) | |
| 165-430, gnl|hg17|chr21 (44203988-44204185) | |
| 165-430, gnl|hg17|chr6 (161623475-161623660) | |
| 165-430, gnl|Hg17|chr6 (161623746-161623479) | |
| 165-430, gnl|loxAfr1|scaffold_27342 (15217-15024) | |
| 165-430, gnl|loxAfr1|scaffold_27342 (15030-15215) | |
| 165-430, gnl|mm7|chr10 (77942634-77942443) | |
| 165-430, gnl|mm7|chr17 (10869417-10869232) | |
| 165-430, gnl|Mm7|chr17 (10869153-10869411) | |
| 165-430, gnl|monDom2|scaffold_0 (42323581-42323396) | |
| 165-430, gnl|monDom2|scaffold_29 (10318596-10318789) | |
| 165-430, gnl|oryCun1|scaffold_86750 (1994-2183) | |
| 165-430, gnl|oryCun1|scaffold_86750 (2179-1994) | |
| 165-430, gnl|panTro1|chr5 (165709016-165709201) | |
| 165-430, gnl|rheMac2|chr4 (158043979-158043793) | |
| 165-430, gnl|rheMac2|chr4 (158043793-158043978) | |
| 165-430, gnl|rn3|chr1 (43065690-43065875) | |
| 165-430, gnl|rn3|chr20 (10731532-10731726) | |
| 165-430, gnl|tetNig1|chr17 (3794236-3794053) | |
| 165-430, gnl|tetNig1|chr2 (14442857-14442663) | |
| 165-430, gnl|xenTro1|scaffold_124 (603663-603481) | |
| 165-430, gnl|xenTro1|scaffold_819 (4207-4405) | |
| 600-761, gnl|bosTau2|chr9 (58934708-58934547) | |
| 600-761, gnl|Hg17|chr6 (161545754-161545593) | |
| 600-761, gnl|Mm7|chr17 (10927672-10927833) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 165-430, gnl|bosTau2|chr9 (59000168-58999904) | |
| 165-430, gnl|canFam2|chr1 (52844034-52844219) | |
| 165-430, gnl|canFam2|chr31 (40197527-40197715) | |
| 165-430, gnl|danRer3|chr1 (48188897-48188711) | |
| 165-430, gnl|danRer3|chr13 (38419485-38419302) | |
| 165-430, gnl|dasNov1|scaffold_99651 (43026-42833) | |
| 165-430, gnl|echTel1|scaffold_246379 (1361-1171) | |
| 165-430, gnl|echTel1|scaffold_296952 (119837-119652) | |
| 165-430, gnl|fr1|chrUn (50778072-50777876) | |
| 165-430, gnl|fr1|chrUn (160710296-160710111) | |
| 165-430, gnl|galGal2|chr1 (103927701-103927893) | |
| 165-430, gnl|galGal2|chr3 (41309414-41309229) | |
| 165-430, gnl|hg17|chr21 (44203988-44204185) | |
| 165-430, gnl|hg17|chr6 (161623475-161623660) | |
| 165-430, gnl|Hg17|chr6 (161623746-161623479) | |
| 165-430, gnl|loxAfr1|scaffold_27342 (15217-15024) | |
| 165-430, gnl|loxAfr1|scaffold_27342 (15030-15215) | |
| 165-430, gnl|mm7|chr10 (77942634-77942443) | |
| 165-430, gnl|mm7|chr17 (10869417-10869232) | |
| 165-430, gnl|Mm7|chr17 (10869153-10869411) | |
| 165-430, gnl|monDom2|scaffold_0 (42323581-42323396) | |
| 165-430, gnl|monDom2|scaffold_29 (10318596-10318789) | |
| 165-430, gnl|oryCun1|scaffold_86750 (1994-2183) | |
| 165-430, gnl|oryCun1|scaffold_86750 (2179-1994) | |
| 165-430, gnl|panTro1|chr5 (165709016-165709201) | |
| 165-430, gnl|rheMac2|chr4 (158043979-158043793) | |
| 165-430, gnl|rheMac2|chr4 (158043793-158043978) | |
| 165-430, gnl|rn3|chr1 (43065690-43065875) | |
| 165-430, gnl|rn3|chr20 (10731532-10731726) | |
| 165-430, gnl|tetNig1|chr17 (3794236-3794053) | |
| 165-430, gnl|tetNig1|chr2 (14442857-14442663) | |
| 165-430, gnl|xenTro1|scaffold_124 (603663-603481) | |
| 165-430, gnl|xenTro1|scaffold_819 (4207-4405) | |
| 600-761, gnl|bosTau2|chr9 (58934708-58934547) | |
| 600-761, gnl|Hg17|chr6 (161545754-161545593) | |
| 600-761, gnl|Mm7|chr17 (10927672-10927833) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| nco (0.161734) | |
| ese (0.126502) |