Non-Coding RNA Search

Ss1.1-Ova1-OVRM10024F07.5

Sequence:


               
               AGTGGAGGAAGAAGCATGGCGTGGCGACAGCTCAAAAAGCGGGCCCAGGATGCCATGGTG
ATCCTGGGGGGCGGAGGACTTCTCTTCGCCTCCTACCTGACAGCCACGGGGGATGAGCGT
TTCTACAGGGAACTCCTGATGCCGGCTCTGCAGGGGCTGCTAGACCCAGAGACAGCTCAC
AGGCTGGCCATTCGCTTCACATCCCTGGGGCTCCTTCCTCGGGCCACGTTTCAAGACTCT
GACATGCTGGAAGTGAGAGTCCTGGGACATAAATTCCGAAATCCAGTAGGAATCGCTGCA
GGATTTGATAAGCACGGGGAAGCTGTGGATGGCCTTTACAAGATGGGCTTCGGTTTTGTT
GAGATAGGCAGTGTTACCCCCAAACCTCAGGAGGGAAACCCCAGACCCAGGGTCTTCCGC
CTCCCCGAGGACCAAGCCATCATTAACAGATACGGATTCAACAGTCACGGGCTCTCAGTG
GTGGAACACAGGTTACGGGCCAGGCAGCAGACGCAGGCCAGGCTCACAGAAGATGGGCTG
CCACTGGGAATAAACCTGGGGAAGAATAAGACCTCGGTGGACGCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGGAGGAAGAAGCATGGCGTGGCGACAGCTCAAAAAGCGGGCCCAGGATGCCATGGTG
ATCCTGGGGGGCGGAGGACTTCTCTTCGCCTCCTACCTGACAGCCACGGGGGATGAGCGT
TTCTACAGGGAACTCCTGATGCCGGCTCTGCAGGGGCTGCTAGACCCAGAGACAGCTCAC
AGGCTGGCCATTCGCTTCACATCCCTGGGGCTCCTTCCTCGGGCCACGTTTCAAGACTCT
GACATGCTGGAAGTGAGAGTCCTGGGACATAAATTCCGAAATCCAGTAGGAATCGCTGCA
GGATTTGATAAGCACGGGGAAGCTGTGGATGGCCTTTACAAGATGGGCTTCGGTTTTGTT
GAGATAGGCAGTGTTACCCCCAAACCTCAGGAGGGAAACCCCAGACCCAGGGTCTTCCGC
CTCCCCGAGGACCAAGCCATCATTAACAGATACGGATTCAACAGTCACGGGCTCTCAGTG
GTGGAACACAGGTTACGGGCCAGGCAGCAGACGCAGGCCAGGCTCACAGAAGATGGGCTG
CCACTGGGAATAAACCTGGGGAAGAATAAGACCTCGGTGGACGCTGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               32-253, gnl|bosTau2|chr18 (32188558-32188337)
               

               
               32-253, gnl|Hg17|chr16 (70603445-70603666)
               

               
               32-253, gnl|Mm7|chr8 (108206565-108206336)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-253, gnl|bosTau2|chr18 (32188558-32188337)
               

               
               32-253, gnl|Hg17|chr16 (70603445-70603666)
               

               
               32-253, gnl|Mm7|chr8 (108206565-108206336)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	32-253, gnl\|bosTau2\|chr18 (32188558-32188337)
	32-253, gnl\|Hg17\|chr16 (70603445-70603666)
	32-253, gnl\|Mm7\|chr8 (108206565-108206336)