Non-Coding RNA Search

Ss1.1-Ova1-OVRM10028G10.5

Sequence:


               
               TTGGTGGCAGAGTCATTATCTTTTGCTTTTATGATATAATTGTTTTTTAAAAAGTTCAGT
ATTAATCATGTGAGTTGAATTAGGAGTCTGTTTTTAAGACGTTTCAAAGAAACTTTAGCT
CTTATTTTAACAAAGCGTTGAGATTCTGATGCGTATAGTCTGAAATTATCAACTCCTTAA
ATGTATGTTTGAGCCAGTTTGCAGAAACTCACATTAACAAGTGCAGAAGTTTCTGAAAAG
GAAGAACGTACATACAGAGGAGGTATTTTGTCTAACTATCAAAATGTTTGAGACTATTTT
TTTAGACACATTTCTGAGTCTGAAGTAAATACAGACATATTTTCTCCCTCTCACTCCCCC
ACCTGCCCTAGTGATAATGATATTACTCATAGAGGAAATAATCAATTAAAATTTTAGTCA
GAGGAGCAAGAATTATTTTTAAATTGTTGGTTCAGGAAACTTCCTGAAGTTTGGAGATCA
GACTAACCATTTATTGGAGGTTTTCCCTGATTTTTCACAATTGGGTGCTGTTTTATGAGC
TTGCCTACTAAAGGACTACGGTAAGTATAAACTTAAGGGTTGCCCATTAGTAATTCTTTT
TTCTACTCTAGACAGACTTTTGCCCCATCAGAAAGGATGAGGAAAAAAAGATGTTTGCAT
TCCAGTATTAGGAGGTGTGAGATATTTTAGCTTATTTGGCCTATCTACATTGGTGTTTCA
GCTTTATAAGGAAATAAGAAATCTTGCTTAAAGGAAACCCTGTATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGTGGCAGAGTCATTATCTTTTGCTTTTATGATATAATTGTTTTTTAAAAAGTTCAGT
ATTAATCATGTGAGTTGAATTAGGAGTCTGTTTTTAAGACGTTTCAAAGAAACTTTAGCT
CTTATTTTAACAAAGCGTTGAGATTCTGATGCGTATAGTCTGAAATTATCAACTCCTTAA
ATGTATGTTTGAGCCAGTTTGCAGAAACTCACATTAACAAGTGCAGAAGTTTCTGAAAAG
GAAGAACGTACATACAGAGGAGGTATTTTGTCTAACTATCAAAATGTTTGAGACTATTTT
TTTAGACACATTTCTGAGTCTGAAGTAAATACAGACATATTTTCTCCCTCTCACTCCCCC
ACCTGCCCTAGTGATAATGATATTACTCATAGAGGAAATAATCAATTAAAATTTTAGTCA
GAGGAGCAAGAATTATTTTTAAATTGTTGGTTCAGGAAACTTCCTGAAGTTTGGAGATCA
GACTAACCATTTATTGGAGGTTTTCCCTGATTTTTCACAATTGGGTGCTGTTTTATGAGC
TTGCCTACTAAAGGACTACGGTAAGTATAAACTTAAGGGTTGCCCATTAGTAATTCTTTT
TTCTACTCTAGACAGACTTTTGCCCCATCAGAAAGGATGAGGAAAAAAAGATGTTTGCAT
TCCAGTATTAGGAGGTGTGAGATATTTTAGCTTATTTGGCCTATCTACATTGGTGTTTCA
GCTTTATAAGGAAATAAGAAATCTTGCTTAAAGGAAACCCTGTATTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-768, gnl|bosTau2|chr22 (8072583-8071811)
               

               
               5-768, gnl|Hg17|chr3 (37007526-37006782)
               

               
               5-768, gnl|Mm7|chr9 (110971701-110972432)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-768, gnl|bosTau2|chr22 (8072583-8071811)
               

               
               5-768, gnl|Hg17|chr3 (37007526-37006782)
               

               
               5-768, gnl|Mm7|chr9 (110971701-110972432)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	5-768, gnl\|bosTau2\|chr22 (8072583-8071811)
	5-768, gnl\|Hg17\|chr3 (37007526-37006782)
	5-768, gnl\|Mm7\|chr9 (110971701-110972432)