Ss1.1-Ova1-OVRM10041G04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGCGCCGGAGTCTGGTCGAGCTAGGCTAGAAGCCGGCTGTCAGTCTCCGTGTAGCCGC AGCCGCCAGGCACCGTGGAGCTGGGGCCCCCTTTCGCTTGGGAGTTTTGTGGTCGTATCG GGTCAGCGGTGACATCCCAAAGGGCAGGCCCGGCAGCCGCCATGGTGGCCAAGGATTATC CCTTCTACCTCACTGTCAAGAGAGCGAACTGCAGCCTGGAGGTACCCCCGGCCAGCAGTC CAGCCAAGGACGCTGAGGAACCCAGTAATAAACGAGTCAAACCCCTTTCCAGAGTCACAT CGCTAGCAAACCTCATCCCGCCCGTAAAGGCCACGCCGTTAAAGCGCTTTAGCCAAACTC TGCAGCGCTCCATCAGCTTCCGAAGCGAGAGCCGGCCTGACATCCTCGCCCCCAGACCCT GGTCCAGAAATGCCGCCCCCTCAAGCACAAAACGGAGAGACAGCAAGCTTTGGAGTGAGA CCTTCGATGTGTGTGTCAATCAGATGCTTACATCCAAGGAAATCAAACGTCAGGAGGCCA TCTTTGAGCTCTCCCAAGGAGAAGAAGACTTAATAGAGGACTTGAAATTGGCAAAAAAGG CCTATCATGACCCCATGCTGAAACTCTCCATAATGACAGAACAAGAGTTGAATCAAATTT TTGGAACACTGGACTCCTTAATTCCTCTACACGAAGACCTCCTTAGTCAGCTTCGAGATG TCCGGAAGCCTGATGGCTCGACTGAACACGTTGGTCCCATTCTCGTGGGCTGGGTAAGAA AAGTTCTCTTGTCTTGATTGACGATAAATTTCAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGCGCCGGAGTCTGGTCGAGCTAGGCTAGAAGCCGGCTGTCAGTCTCCGTGTAGCCGC AGCCGCCAGGCACCGTGGAGCTGGGGCCCCCTTTCGCTTGGGAGTTTTGTGGTCGTATCG GGTCAGCGGTGACATCCCAAAGGGCAGGCCCGGCAGCCGCCATGGTGGCCAAGGATTATC CCTTCTACCTCACTGTCAAGAGAGCGAACTGCAGCCTGGAGGTACCCCCGGCCAGCAGTC CAGCCAAGGACGCTGAGGAACCCAGTAATAAACGAGTCAAACCCCTTTCCAGAGTCACAT CGCTAGCAAACCTCATCCCGCCCGTAAAGGCCACGCCGTTAAAGCGCTTTAGCCAAACTC TGCAGCGCTCCATCAGCTTCCGAAGCGAGAGCCGGCCTGACATCCTCGCCCCCAGACCCT GGTCCAGAAATGCCGCCCCCTCAAGCACAAAACGGAGAGACAGCAAGCTTTGGAGTGAGA CCTTCGATGTGTGTGTCAATCAGATGCTTACATCCAAGGAAATCAAACGTCAGGAGGCCA TCTTTGAGCTCTCCCAAGGAGAAGAAGACTTAATAGAGGACTTGAAATTGGCAAAAAAGG CCTATCATGACCCCATGCTGAAACTCTCCATAATGACAGAACAAGAGTTGAATCAAATTT TTGGAACACTGGACTCCTTAATTCCTCTACACGAAGACCTCCTTAGTCAGCTTCGAGATG TCCGGAAGCCTGATGGCTCGACTGAACACGTTGGTCCCATTCTCGTGGGCTGGGTAAGAA AAGTTCTCTTGTCTTGATTGACGATAAATTTCAGTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 69-258, gnl|bosTau2|chr22 (32730126-32729937) | |
| 69-258, gnl|canFam2|chr20 (36552831-36552498) | |
| 69-258, gnl|echTel1|scaffold_295676 (14960-15267) | |
| 69-258, gnl|hg17|chr3 (56810651-56810976) | |
| 69-258, gnl|Hg17|chr3 (56810959-56810770) | |
| 69-258, gnl|loxAfr1|scaffold_9438 (42573-42261) | |
| 69-258, gnl|mm7|chr14 (24769093-24768840) | |
| 69-258, gnl|Mm7|chr14 (24768851-24769037) | |
| 69-258, gnl|oryCun1|scaffold_210866 (160371-160641) | |
| 69-258, gnl|panTro1|chr2 (58470228-58470553) | |
| 69-258, gnl|rheMac2|chr2 (79563079-79562753) | |
| 69-258, gnl|rn3|chr16 (2595905-2595653) | |
| 363-537, gnl|bosTau2|chr22 (32686906-32686732) | |
| 363-537, gnl|canFam2|chr20 (36595308-36595168) | |
| 363-537, gnl|danRer3|chr22 (49015541-49015408) | |
| 363-537, gnl|dasNov1|scaffold_97337 (3545-3405) | |
| 363-537, gnl|echTel1|scaffold_287942 (39663-39811) | |
| 363-537, gnl|fr1|chrUn (135487072-135487214) | |
| 363-537, gnl|galGal2|chr12 (8502419-8502547) | |
| 363-537, gnl|hg17|chr3 (56764035-56764175) | |
| 363-537, gnl|Hg17|chr3 (56764222-56764048) | |
| 363-537, gnl|loxAfr1|scaffold_9438 (79174-79034) | |
| 363-537, gnl|mm7|chr14 (24812544-24812404) | |
| 363-537, gnl|Mm7|chr14 (24812355-24812529) | |
| 363-537, gnl|monDom2|scaffold_31 (28561599-28561465) | |
| 363-537, gnl|oryCun1|scaffold_210866 (115903-116043) | |
| 363-537, gnl|panTro1|chr2 (58423528-58423668) | |
| 363-537, gnl|rheMac2|chr2 (79618323-79618183) | |
| 363-537, gnl|rn3|chr16 (2638707-2638567) | |
| 363-537, gnl|tetNig1|chrUn_random (5904940-5905097) | |
| 363-537, gnl|xenTro1|scaffold_585 (205506-205366) | |
| 695-816, gnl|bosTau2|chr22 (32680858-32680737) | |
| 695-816, gnl|Hg17|chr3 (56760202-56760082) | |
| 695-816, gnl|Mm7|chr14 (24818858-24818976) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-258, gnl|bosTau2|chr22 (32730126-32729937) | |
| 69-258, gnl|canFam2|chr20 (36552831-36552498) | |
| 69-258, gnl|echTel1|scaffold_295676 (14960-15267) | |
| 69-258, gnl|hg17|chr3 (56810651-56810976) | |
| 69-258, gnl|Hg17|chr3 (56810959-56810770) | |
| 69-258, gnl|loxAfr1|scaffold_9438 (42573-42261) | |
| 69-258, gnl|mm7|chr14 (24769093-24768840) | |
| 69-258, gnl|Mm7|chr14 (24768851-24769037) | |
| 69-258, gnl|oryCun1|scaffold_210866 (160371-160641) | |
| 69-258, gnl|panTro1|chr2 (58470228-58470553) | |
| 69-258, gnl|rheMac2|chr2 (79563079-79562753) | |
| 69-258, gnl|rn3|chr16 (2595905-2595653) | |
| 363-537, gnl|bosTau2|chr22 (32686906-32686732) | |
| 363-537, gnl|canFam2|chr20 (36595308-36595168) | |
| 363-537, gnl|danRer3|chr22 (49015541-49015408) | |
| 363-537, gnl|dasNov1|scaffold_97337 (3545-3405) | |
| 363-537, gnl|echTel1|scaffold_287942 (39663-39811) | |
| 363-537, gnl|fr1|chrUn (135487072-135487214) | |
| 363-537, gnl|galGal2|chr12 (8502419-8502547) | |
| 363-537, gnl|hg17|chr3 (56764035-56764175) | |
| 363-537, gnl|Hg17|chr3 (56764222-56764048) | |
| 363-537, gnl|loxAfr1|scaffold_9438 (79174-79034) | |
| 363-537, gnl|mm7|chr14 (24812544-24812404) | |
| 363-537, gnl|Mm7|chr14 (24812355-24812529) | |
| 363-537, gnl|monDom2|scaffold_31 (28561599-28561465) | |
| 363-537, gnl|oryCun1|scaffold_210866 (115903-116043) | |
| 363-537, gnl|panTro1|chr2 (58423528-58423668) | |
| 363-537, gnl|rheMac2|chr2 (79618323-79618183) | |
| 363-537, gnl|rn3|chr16 (2638707-2638567) | |
| 363-537, gnl|tetNig1|chrUn_random (5904940-5905097) | |
| 363-537, gnl|xenTro1|scaffold_585 (205506-205366) | |
| 695-816, gnl|bosTau2|chr22 (32680858-32680737) | |
| 695-816, gnl|Hg17|chr3 (56760202-56760082) | |
| 695-816, gnl|Mm7|chr14 (24818858-24818976) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbr (1.0238) | |
| clu (0.119646) |