Ss1.1-Ova1-OVRM10045C06.5
|
AGAGGCCGGGCCGAGGCGGCTTTCGGGTAGCGGGACCCCGGACTAGGTTTGGGGCGCCAC
TCCCGGACCCAGTCATGAACGGGCCGGCGGATGGCGAAGTGGACTACAAGAAGAAATACC
GGAACCTGAAGCGGAAGCTCAAATTCCTCATCTACGAACACGAGTGCTTCCAGGAGGAAC
TGAGGAAGGCACAGAGAAAATTGTTGAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGACC
GACTTCTGCAGTACGAGAACGTGGATGAAGACTCTTCTGACTCAGATGCCACCGCATCTT
CGGATAACAGCGAGACCGAGGGGACACCCAAGTTGTCGGACACACCAGCTCCTAAGAGGA
AGAGAAGCCCTCCGTGGGGGGGGCGCCCCCTCCCCCTCCAGCCTCTCCCTGCCTCCTTCA
GCAGGGGTTTCCCCTTCAGGCCTNCCGGTGCCCCCTCCCCATACCTGAGCTCGATGGCGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGAGGCCGGGCCGAGGCGGCTTTCGGGTAGCGGGACCCCGGACTAGGTTTGGGGCGCCAC
TCCCGGACCCAGTCATGAACGGGCCGGCGGATGGCGAAGTGGACTACAAGAAGAAATACC
GGAACCTGAAGCGGAAGCTCAAATTCCTCATCTACGAACACGAGTGCTTCCAGGAGGAAC
TGAGGAAGGCACAGAGAAAATTGTTGAAGGTGTCCCGGGACAAGAGTTTCCTCCTAGACC
GACTTCTGCAGTACGAGAACGTGGATGAAGACTCTTCTGACTCAGATGCCACCGCATCTT
CGGATAACAGCGAGACCGAGGGGACACCCAAGTTGTCGGACACACCAGCTCCTAAGAGGA
AGAGAAGCCCTCCGTGGGGGGGGCGCCCCCTCCCCCTCCAGCCTCTCCCTGCCTCCTTCA
GCAGGGGTTTCCCCTTCAGGCCTNCCGGTGCCCCCTCCCCATACCTGAGCTCGATGGCGG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-156, gnl|bosTau2|chr25 (25347274-25347428) |
|
1-156, gnl|Hg17|chr16 (29915066-29915214) |
|
1-156, gnl|Mm7|chr7 (122958403-122958262) |
| |
|
357-476, gnl|bosTau2|chr25 (25350518-25350634) |
|
357-476, gnl|canFam2|chr6 (21049450-21049606) |
|
357-476, gnl|dasNov1|scaffold_40993 (34624-34511) |
|
357-476, gnl|echTel1|scaffold_304893 (7775-7614) |
|
357-476, gnl|hg17|chr16 (29919725-29919875) |
|
357-476, gnl|Hg17|chr16 (29919749-29919865) |
|
357-476, gnl|loxAfr1|scaffold_149275 (4449-4601) |
|
357-476, gnl|mm7|chr7 (122954374-122954223) |
|
357-476, gnl|Mm7|chr7 (122954347-122954231) |
|
357-476, gnl|monDom2|scaffold_5 (119748949-119748797) |
|
357-476, gnl|oryCun1|scaffold_204194 (59887-59737) |
|
357-476, gnl|panTro1|chr18 (30682262-30682412) |
|
357-476, gnl|rheMac2|chr20 (27967941-27968091) |
|
357-476, gnl|rn3|chr1 (186187071-186186925) |
|
357-476, gnl|xenTro1|scaffold_805 (33349-33189) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-156, gnl|bosTau2|chr25 (25347274-25347428) |
|
1-156, gnl|Hg17|chr16 (29915066-29915214) |
|
1-156, gnl|Mm7|chr7 (122958403-122958262) |
| |
|
357-476, gnl|bosTau2|chr25 (25350518-25350634) |
|
357-476, gnl|canFam2|chr6 (21049450-21049606) |
|
357-476, gnl|dasNov1|scaffold_40993 (34624-34511) |
|
357-476, gnl|echTel1|scaffold_304893 (7775-7614) |
|
357-476, gnl|hg17|chr16 (29919725-29919875) |
|
357-476, gnl|Hg17|chr16 (29919749-29919865) |
|
357-476, gnl|loxAfr1|scaffold_149275 (4449-4601) |
|
357-476, gnl|mm7|chr7 (122954374-122954223) |
|
357-476, gnl|Mm7|chr7 (122954347-122954231) |
|
357-476, gnl|monDom2|scaffold_5 (119748949-119748797) |
|
357-476, gnl|oryCun1|scaffold_204194 (59887-59737) |
|
357-476, gnl|panTro1|chr18 (30682262-30682412) |
|
357-476, gnl|rheMac2|chr20 (27967941-27968091) |
|
357-476, gnl|rn3|chr1 (186187071-186186925) |
|
357-476, gnl|xenTro1|scaffold_805 (33349-33189) |
|
ill (0.175593) |
|
med (0.116252) |
|
ill (0.175593) |
|
med (0.116252) |
