Ss1.1-Ova1-OVRM10050G08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTCCCCTCCACGTGGGGACGCGGGATGGCGGCGGCCGTGGCGGATGAGGCGGCGCCGC GCGACGTGCAGCGGCTGCTCGTGCAGTTCCAGGATGAAGGCGGGCAGTTACTGGGCTCCC CGTTCGACGTGCCGGTGGACATCACCCCGGACAAGCTGCAGCTCGTGTGCAACGCGTTGC TGGCCCAGGAGGATCCCTTGCCACTGGCTTTCTATGTCCATGATGCCGAGATCGTCTCCT CCCTGGGGAAGACGCTGGAGTCACAGGCAGTGGAGACAGAGAAGGTTCTCGACATCATCT ACCAGCCACAGGCTGTCTTCAAGGTCCGCGCTGTGACCCGCTGCACCAGCTCCTTGGAGG GTCACAGTGAGGCGGTCATTTCCGTGGCCTTCAGCCCCACAGGAAAGTACCTGGCCAGTG GCTCCGGAGACACTACCGTGCGCTTCTGGGATCTCAGCACTGAGACACCACATTTCACGT GCCAGGGACATAGACACTGGGTCCTTAGCATATCCTGGTCCCCAGATGGCAAGAAGCTGG CTTCCGGCTGCAAGAATGGCCAGATTCTCCTGTGGGACCCAAGCACAGGGAAGCAAGTGG GCAGGGCCCTTGCAGGCCACAGCAAGTGGATCACAGCCCTGAGCTGGGAGCCCCTCCATG CGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAGGACGGCAGCGTGCGGGTCTGGG ACACAACCGCTGGCCGCTGTGAGCGCATCCTCACGGGACACACGCAGTCGGTCACCTGTC TCCGGTGGGGAGGGGACGGGCTCCTCTACTCTGCCTCCCAGGACCGCACCATCAAAGTCT GGAGGGCTCATGACGGCGTGCTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTCCCCTCCACGTGGGGACGCGGGATGGCGGCGGCCGTGGCGGATGAGGCGGCGCCGC GCGACGTGCAGCGGCTGCTCGTGCAGTTCCAGGATGAAGGCGGGCAGTTACTGGGCTCCC CGTTCGACGTGCCGGTGGACATCACCCCGGACAAGCTGCAGCTCGTGTGCAACGCGTTGC TGGCCCAGGAGGATCCCTTGCCACTGGCTTTCTATGTCCATGATGCCGAGATCGTCTCCT CCCTGGGGAAGACGCTGGAGTCACAGGCAGTGGAGACAGAGAAGGTTCTCGACATCATCT ACCAGCCACAGGCTGTCTTCAAGGTCCGCGCTGTGACCCGCTGCACCAGCTCCTTGGAGG GTCACAGTGAGGCGGTCATTTCCGTGGCCTTCAGCCCCACAGGAAAGTACCTGGCCAGTG GCTCCGGAGACACTACCGTGCGCTTCTGGGATCTCAGCACTGAGACACCACATTTCACGT GCCAGGGACATAGACACTGGGTCCTTAGCATATCCTGGTCCCCAGATGGCAAGAAGCTGG CTTCCGGCTGCAAGAATGGCCAGATTCTCCTGTGGGACCCAAGCACAGGGAAGCAAGTGG GCAGGGCCCTTGCAGGCCACAGCAAGTGGATCACAGCCCTGAGCTGGGAGCCCCTCCATG CGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAGGACGGCAGCGTGCGGGTCTGGG ACACAACCGCTGGCCGCTGTGAGCGCATCCTCACGGGACACACGCAGTCGGTCACCTGTC TCCGGTGGGGAGGGGACGGGCTCCTCTACTCTGCCTCCCAGGACCGCACCATCAAAGTCT GGAGGGCTCATGACGGCGTGCTGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
| 185-409, gnl|bosTau2|chr19 (9018795-9018571) | |
| 185-409, gnl|canFam2|chr9 (41544862-41544595) | |
| 185-409, gnl|echTel1|scaffold_235022 (8207-7970) | |
| 185-409, gnl|fr1|chrUn (220177390-220177149) | |
| 185-409, gnl|galGal2|chr19 (6362589-6362325) | |
| 185-409, gnl|hg17|chr17 (30490977-30491243) | |
| 185-409, gnl|Hg17|chr17 (30491202-30490978) | |
| 185-409, gnl|loxAfr1|scaffold_618 (124586-124850) | |
| 185-409, gnl|mm7|chr11 (82989124-82989391) | |
| 185-409, gnl|Mm7|chr11 (82989349-82989125) | |
| 185-409, gnl|monDom2|scaffold_44 (7530856-7530590) | |
| 185-409, gnl|oryCun1|scaffold_206206 (72396-72659) | |
| 185-409, gnl|panTro1|chr19 (34012888-34013153) | |
| 185-409, gnl|rheMac2|chr16 (30440510-30440776) | |
| 185-409, gnl|rn3|chr10 (71137700-71137970) | |
| 185-409, gnl|tetNig1|chr7 (3590732-3590490) | |
| 185-409, gnl|xenTro1|scaffold_38 (1304260-1304513) | |
| 561-662, gnl|bosTau2|chr19 (9016847-9016746) | |
| 561-662, gnl|canFam2|chr9 (41546669-41546566) | |
| 561-662, gnl|fr1|chrUn (220177900-220177804) | |
| 561-662, gnl|galGal2|chr19 (6364571-6364473) | |
| 561-662, gnl|hg17|chr17 (30488663-30488766) | |
| 561-662, gnl|Hg17|chr17 (30488775-30488674) | |
| 561-662, gnl|loxAfr1|scaffold_618 (122320-122422) | |
| 561-662, gnl|mm7|chr11 (82986841-82986944) | |
| 561-662, gnl|Mm7|chr11 (82986953-82986852) | |
| 561-662, gnl|monDom2|scaffold_44 (7531965-7531865) | |
| 561-662, gnl|oryCun1|scaffold_206206 (69034-69137) | |
| 561-662, gnl|panTro1|chr19 (34010573-34010676) | |
| 561-662, gnl|rheMac2|chr16 (30437933-30438036) | |
| 561-662, gnl|rn3|chr10 (71135314-71135417) | |
| 561-662, gnl|tetNig1|chr7 (3591269-3591166) | |
| 561-662, gnl|xenTro1|scaffold_38 (1301294-1301390) | |
| 663-853, gnl|bosTau2|chr19 (9016410-9016220) | |
| 663-853, gnl|canFam2|chr9 (41547204-41546950) | |
| 663-853, gnl|fr1|chrUn (220178540-220178319) | |
| 663-853, gnl|galGal2|chr19 (6366444-6366189) | |
| 663-853, gnl|hg17|chr17 (30488094-30488348) | |
| 663-853, gnl|Hg17|chr17 (30488324-30488134) | |
| 663-853, gnl|loxAfr1|scaffold_618 (121838-122095) | |
| 663-853, gnl|mm7|chr11 (82986341-82986582) | |
| 663-853, gnl|Mm7|chr11 (82986558-82986368) | |
| 663-853, gnl|monDom2|scaffold_44 (7532459-7532231) | |
| 663-853, gnl|oryCun1|scaffold_206206 (68549-68797) | |
| 663-853, gnl|panTro1|chr19 (34010004-34010258) | |
| 663-853, gnl|rheMac2|chr16 (30437358-30437612) | |
| 663-853, gnl|rn3|chr10 (71134799-71135046) | |
| 663-853, gnl|tetNig1|chr7 (3591569-3591337) | |
| 663-853, gnl|xenTro1|scaffold_38 (1300257-1300468) |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 185-409, gnl|bosTau2|chr19 (9018795-9018571) | |
| 185-409, gnl|canFam2|chr9 (41544862-41544595) | |
| 185-409, gnl|echTel1|scaffold_235022 (8207-7970) | |
| 185-409, gnl|fr1|chrUn (220177390-220177149) | |
| 185-409, gnl|galGal2|chr19 (6362589-6362325) | |
| 185-409, gnl|hg17|chr17 (30490977-30491243) | |
| 185-409, gnl|Hg17|chr17 (30491202-30490978) | |
| 185-409, gnl|loxAfr1|scaffold_618 (124586-124850) | |
| 185-409, gnl|mm7|chr11 (82989124-82989391) | |
| 185-409, gnl|Mm7|chr11 (82989349-82989125) | |
| 185-409, gnl|monDom2|scaffold_44 (7530856-7530590) | |
| 185-409, gnl|oryCun1|scaffold_206206 (72396-72659) | |
| 185-409, gnl|panTro1|chr19 (34012888-34013153) | |
| 185-409, gnl|rheMac2|chr16 (30440510-30440776) | |
| 185-409, gnl|rn3|chr10 (71137700-71137970) | |
| 185-409, gnl|tetNig1|chr7 (3590732-3590490) | |
| 185-409, gnl|xenTro1|scaffold_38 (1304260-1304513) | |
| 561-662, gnl|bosTau2|chr19 (9016847-9016746) | |
| 561-662, gnl|canFam2|chr9 (41546669-41546566) | |
| 561-662, gnl|fr1|chrUn (220177900-220177804) | |
| 561-662, gnl|galGal2|chr19 (6364571-6364473) | |
| 561-662, gnl|hg17|chr17 (30488663-30488766) | |
| 561-662, gnl|Hg17|chr17 (30488775-30488674) | |
| 561-662, gnl|loxAfr1|scaffold_618 (122320-122422) | |
| 561-662, gnl|mm7|chr11 (82986841-82986944) | |
| 561-662, gnl|Mm7|chr11 (82986953-82986852) | |
| 561-662, gnl|monDom2|scaffold_44 (7531965-7531865) | |
| 561-662, gnl|oryCun1|scaffold_206206 (69034-69137) | |
| 561-662, gnl|panTro1|chr19 (34010573-34010676) | |
| 561-662, gnl|rheMac2|chr16 (30437933-30438036) | |
| 561-662, gnl|rn3|chr10 (71135314-71135417) | |
| 561-662, gnl|tetNig1|chr7 (3591269-3591166) | |
| 561-662, gnl|xenTro1|scaffold_38 (1301294-1301390) | |
| 663-853, gnl|bosTau2|chr19 (9016410-9016220) | |
| 663-853, gnl|canFam2|chr9 (41547204-41546950) | |
| 663-853, gnl|fr1|chrUn (220178540-220178319) | |
| 663-853, gnl|galGal2|chr19 (6366444-6366189) | |
| 663-853, gnl|hg17|chr17 (30488094-30488348) | |
| 663-853, gnl|Hg17|chr17 (30488324-30488134) | |
| 663-853, gnl|loxAfr1|scaffold_618 (121838-122095) | |
| 663-853, gnl|mm7|chr11 (82986341-82986582) | |
| 663-853, gnl|Mm7|chr11 (82986558-82986368) | |
| 663-853, gnl|monDom2|scaffold_44 (7532459-7532231) | |
| 663-853, gnl|oryCun1|scaffold_206206 (68549-68797) | |
| 663-853, gnl|panTro1|chr19 (34010004-34010258) | |
| 663-853, gnl|rheMac2|chr16 (30437358-30437612) | |
| 663-853, gnl|rn3|chr10 (71134799-71135046) | |
| 663-853, gnl|tetNig1|chr7 (3591569-3591337) | |
| 663-853, gnl|xenTro1|scaffold_38 (1300257-1300468) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |