Ss1.1-Ova1-OVRM10053A04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAACGGAAGTCCTACTCCTTCGGAGCTCCTCGTCCGGGCGGAAGAAGCGTTCTTCCTC TAGCGGTGGCTGCGTAGCTGCGCGCCTCTGCGGTCTGCGGCTTGGCTTCCGGGAGCTACG GGAGCATCCTCACCTGGTGTTGATGTTGATTGAATATGCCTTTTTAGCATATTAAAATGG CTGTACCCAAGGACGCCATCCCTTCATTGTCGGAATGCCAGTGCCAGATCTGTGTGGAAA TTCTATTTGAGCCTGTGACACTCCCTTGTAACCACACGCTGTGTAAACCATGCTTCCAGT CGACTGTCGAAAAAGCAAATTTGTGCTGCCCCTTCTGTCGCCGCCGAGTCTCTTCGTGGA CTCGACACCGCACCCGAACAAATTCTCTTGTCAACATGGAACTGTGGAAGATAATTCAGA AACACTATCCAAAAGAATGCAAGCTTAGAGCCTCTGGGCAAGAATCAGAGGAAATTGTTG ATGACCATCAACCAGTCCGCCTATTAAGTAAACCTGGGGAATTAAGAAGAGAATATGAAG AGGAGATAAGCAAGGTAGAGGCAGAGCGACGAGCCAATGAGGAAGAAGAAAACAAAGCCA GTGAAGAATATATACAGAGGTTATTGGCAGAGGAGGAAGAAGAAGAAAAACGACNGGCAG ------------GGGAGATGGAAGAAACAGCTGAAAGTGATGAAGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAACGGAAGTCCTACTCCTTCGGAGCTCCTCGTCCGGGCGGAAGAAGCGTTCTTCCTC TAGCGGTGGCTGCGTAGCTGCGCGCCTCTGCGGTCTGCGGCTTGGCTTCCGGGAGCTACG GGAGCATCCTCACCTGGTGTTGATGTTGATTGAATATGCCTTTTTAGCATATTAAAATGG CTGTACCCAAGGACGCCATCCCTTCATTGTCGGAATGCCAGTGCCAGATCTGTGTGGAAA TTCTATTTGAGCCTGTGACACTCCCTTGTAACCACACGCTGTGTAAACCATGCTTCCAGT CGACTGTCGAAAAAGCAAATTTGTGCTGCCCCTTCTGTCGCCGCCGAGTCTCTTCGTGGA CTCGACACCGCACCCGAACAAATTCTCTTGTCAACATGGAACTGTGGAAGATAATTCAGA AACACTATCCAAAAGAATGCAAGCTTAGAGCCTCTGGGCAAGAATCAGAGGAAATTGTTG ATGACCATCAACCAGTCCGCCTATTAAGTAAACCTGGGGAATTAAGAAGAGAATATGAAG AGGAGATAAGCAAGGTAGAGGCAGAGCGACGAGCCAATGAGGAAGAAGAAAACAAAGCCA GTGAAGAATATATACAGAGGTTATTGGCAGAGGAGGAAGAAGAAGAAAAACGACNGGCAG ------------GGGAGATGGAAGAAACAGCTGAAAGTGATGAAGAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 2-138, gnl|bosTau2|chr1 (43207449-43207314) | |
| 2-138, gnl|canFam2|chr33 (32613873-32614065) | |
| 2-138, gnl|dasNov1|scaffold_12520 (50151-50449) | |
| 2-138, gnl|echTel1|scaffold_207498 (3000-3255) | |
| 2-138, gnl|hg17|chr3 (197718590-197718824) | |
| 2-138, gnl|loxAfr1|scaffold_6821 (9992-10252) | |
| 2-138, gnl|mm7|chr16 (31952432-31952178) | |
| 2-138, gnl|Mm7|chr16 (31952193-31952319) | |
| 2-138, gnl|monDom2|scaffold_24 (26222495-26222756) | |
| 2-138, gnl|oryCun1|scaffold_214084 (85492-85755) | |
| 2-138, gnl|panTro1|chr2 (201897584-201897799) | |
| 2-138, gnl|rheMac2|chr2 (188930505-188930271) | |
| 2-138, gnl|rn3|chr11 (70385787-70386033) | |
| 144-481, gnl|bosTau2|chr1 (43206983-43206644) | |
| 144-481, gnl|canFam2|chr33 (32613396-32613680) | |
| 144-481, gnl|danRer3|chr15 (6914118-6914404) | |
| 144-481, gnl|dasNov1|scaffold_12520 (49593-49877) | |
| 144-481, gnl|echTel1|scaffold_207498 (2515-2799) | |
| 144-481, gnl|galGal2|chr9 (8899060-8899341) | |
| 144-481, gnl|hg17|chr3 (197718043-197718327) | |
| 144-481, gnl|Hg17|chr3 (197718389-197718050) | |
| 144-481, gnl|loxAfr1|scaffold_6821 (9450-9734) | |
| 144-481, gnl|mm7|chr16 (31952953-31952669) | |
| 144-481, gnl|Mm7|chr16 (31952605-31952944) | |
| 144-481, gnl|monDom2|scaffold_24 (26220868-26221152) | |
| 144-481, gnl|oryCun1|scaffold_214084 (84951-85235) | |
| 144-481, gnl|panTro1|chr2 (201897037-201897321) | |
| 144-481, gnl|rn3|chr11 (70385267-70385551) | |
| 144-481, gnl|xenTro1|scaffold_1579 (105557-105848) | |
| 552-660, gnl|bosTau2|chr1 (43165108-43165000) | |
| 552-660, gnl|canFam2|chr33 (32596033-32596238) | |
| 552-660, gnl|danRer3|chr15 (6906979-6907159) | |
| 552-660, gnl|dasNov1|scaffold_12520 (18632-18838) | |
| 552-660, gnl|galGal2|chr9 (8896728-8896925) | |
| 552-660, gnl|hg17|chr3 (197702573-197702778) | |
| 552-660, gnl|Hg17|chr3 (197702762-197702654) | |
| 552-660, gnl|loxAfr1|scaffold_157360 (1277-1482) | |
| 552-660, gnl|mm7|chr16 (31960083-31959882) | |
| 552-660, gnl|Mm7|chr16 (31959892-31960000) | |
| 552-660, gnl|monDom2|scaffold_24 (26204792-26204997) | |
| 552-660, gnl|oryCun1|scaffold_214084 (57573-57778) | |
| 552-660, gnl|panTro1|chr2 (201881435-201881640) | |
| 552-660, gnl|rheMac2|chr2 (188947470-188947265) | |
| 552-660, gnl|rn3|chr11 (70378189-70378388) | |
| 552-660, gnl|xenTro1|scaffold_1579 (102725-102926) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-138, gnl|bosTau2|chr1 (43207449-43207314) | |
| 2-138, gnl|canFam2|chr33 (32613873-32614065) | |
| 2-138, gnl|dasNov1|scaffold_12520 (50151-50449) | |
| 2-138, gnl|echTel1|scaffold_207498 (3000-3255) | |
| 2-138, gnl|hg17|chr3 (197718590-197718824) | |
| 2-138, gnl|loxAfr1|scaffold_6821 (9992-10252) | |
| 2-138, gnl|mm7|chr16 (31952432-31952178) | |
| 2-138, gnl|Mm7|chr16 (31952193-31952319) | |
| 2-138, gnl|monDom2|scaffold_24 (26222495-26222756) | |
| 2-138, gnl|oryCun1|scaffold_214084 (85492-85755) | |
| 2-138, gnl|panTro1|chr2 (201897584-201897799) | |
| 2-138, gnl|rheMac2|chr2 (188930505-188930271) | |
| 2-138, gnl|rn3|chr11 (70385787-70386033) | |
| 144-481, gnl|bosTau2|chr1 (43206983-43206644) | |
| 144-481, gnl|canFam2|chr33 (32613396-32613680) | |
| 144-481, gnl|danRer3|chr15 (6914118-6914404) | |
| 144-481, gnl|dasNov1|scaffold_12520 (49593-49877) | |
| 144-481, gnl|echTel1|scaffold_207498 (2515-2799) | |
| 144-481, gnl|galGal2|chr9 (8899060-8899341) | |
| 144-481, gnl|hg17|chr3 (197718043-197718327) | |
| 144-481, gnl|Hg17|chr3 (197718389-197718050) | |
| 144-481, gnl|loxAfr1|scaffold_6821 (9450-9734) | |
| 144-481, gnl|mm7|chr16 (31952953-31952669) | |
| 144-481, gnl|Mm7|chr16 (31952605-31952944) | |
| 144-481, gnl|monDom2|scaffold_24 (26220868-26221152) | |
| 144-481, gnl|oryCun1|scaffold_214084 (84951-85235) | |
| 144-481, gnl|panTro1|chr2 (201897037-201897321) | |
| 144-481, gnl|rn3|chr11 (70385267-70385551) | |
| 144-481, gnl|xenTro1|scaffold_1579 (105557-105848) | |
| 552-660, gnl|bosTau2|chr1 (43165108-43165000) | |
| 552-660, gnl|canFam2|chr33 (32596033-32596238) | |
| 552-660, gnl|danRer3|chr15 (6906979-6907159) | |
| 552-660, gnl|dasNov1|scaffold_12520 (18632-18838) | |
| 552-660, gnl|galGal2|chr9 (8896728-8896925) | |
| 552-660, gnl|hg17|chr3 (197702573-197702778) | |
| 552-660, gnl|Hg17|chr3 (197702762-197702654) | |
| 552-660, gnl|loxAfr1|scaffold_157360 (1277-1482) | |
| 552-660, gnl|mm7|chr16 (31960083-31959882) | |
| 552-660, gnl|Mm7|chr16 (31959892-31960000) | |
| 552-660, gnl|monDom2|scaffold_24 (26204792-26204997) | |
| 552-660, gnl|oryCun1|scaffold_214084 (57573-57778) | |
| 552-660, gnl|panTro1|chr2 (201881435-201881640) | |
| 552-660, gnl|rheMac2|chr2 (188947470-188947265) | |
| 552-660, gnl|rn3|chr11 (70378189-70378388) | |
| 552-660, gnl|xenTro1|scaffold_1579 (102725-102926) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) |