Ss1.1-Ova1-OVRM10053G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCACGTCCGCATAGGTCCCGGCGCCCCCTGGCTGGGAACCCACGGGCGGCAGCGCACTG CCCGGCTGGCACTGCGCGGCGGCGGCGTGACAGCTTATTGCAGGAGTGGCCAGGACATCC TCTTTCAGAAGTAATGCCCACAGAAAGCGGGAGCTGTTCAGCTGCTCGCCAAGCAAAACA GAAACGCAAATCTCATAGCCTTTCCATCCGAAGAACTAACAGCTCGGAGCAGGAGCGGAC GGGCCTGCCGAGGGAAATGTTAGAGGGACAGGATTCTAAACTGCCTTCCTCGGTTCGCAG TACGCTTCTGGAATTGTTTGGTCAAATAGAAAGAGAATTTGAAAACCTTTATATTGAAAA CTTAGAATTGCGCAGAGAAATCGAGACTCTTAATGAACGTCTGGCTGCTGAAGGACAGGC GGTCGACGGGGCGGAGCTGAGTAAGGGGCAGCTCAAGACGAAAGCCGGCCACAGCACCAG CCAGCTCTCGCAGAAGCTGAAGACCACCTACAAGGCCTCCACCAGCAAGATCGTCTCCAG CTTTAAGACCACCACATCGCGGGCCGTGTGCCAGCTCGTGAAGGAGTACGTTGGCCACAG GGATGGCATCTGGGACGTCAGCGTGGCAAGGACAGCGCCTGTGGTGCTGGGGACCGCGTC TGCTGATCACACGGCTCTGCTGTGGAGCATCGAGACCGGGCGGAGCCTCGCCAGGTACAC GGGCCACGTGGGGTCAGTGAATTCCGTAAAATTTCATCCATCTGAGCAGCTGGCTCTCAC CGCATCTGGAGATCAGACTGCTCATGTCTGGAGGTACGCGGTCCAGCTGCCCACTCCTCA GCCCGTGGCCGACACGAGTCAGCTGTGTGGCGAGGACGAGGTGGAGTGCTCCGATAAGGA CGAGCCTGACGCAGACGCGGATGCGCCCAGCGACTGTCCCACCATCCGGGCGCCGCTGAC GTCTCTTAAGAGCCACCAGGGCGTGGTCATCGCTGCCGACTGGCTGGTCGGGGGGAAGCA GGCGGTGACGGCCTCCTGGGACAGGACGGCGAACCTGTACGACGTGGAGACTTCGGAGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCACGTCCGCATAGGTCCCGGCGCCCCCTGGCTGGGAACCCACGGGCGGCAGCGCACTG CCCGGCTGGCACTGCGCGGCGGCGGCGTGACAGCTTATTGCAGGAGTGGCCAGGACATCC TCTTTCAGAAGTAATGCCCACAGAAAGCGGGAGCTGTTCAGCTGCTCGCCAAGCAAAACA GAAACGCAAATCTCATAGCCTTTCCATCCGAAGAACTAACAGCTCGGAGCAGGAGCGGAC GGGCCTGCCGAGGGAAATGTTAGAGGGACAGGATTCTAAACTGCCTTCCTCGGTTCGCAG TACGCTTCTGGAATTGTTTGGTCAAATAGAAAGAGAATTTGAAAACCTTTATATTGAAAA CTTAGAATTGCGCAGAGAAATCGAGACTCTTAATGAACGTCTGGCTGCTGAAGGACAGGC GGTCGACGGGGCGGAGCTGAGTAAGGGGCAGCTCAAGACGAAAGCCGGCCACAGCACCAG CCAGCTCTCGCAGAAGCTGAAGACCACCTACAAGGCCTCCACCAGCAAGATCGTCTCCAG CTTTAAGACCACCACATCGCGGGCCGTGTGCCAGCTCGTGAAGGAGTACGTTGGCCACAG GGATGGCATCTGGGACGTCAGCGTGGCAAGGACAGCGCCTGTGGTGCTGGGGACCGCGTC TGCTGATCACACGGCTCTGCTGTGGAGCATCGAGACCGGGCGGAGCCTCGCCAGGTACAC GGGCCACGTGGGGTCAGTGAATTCCGTAAAATTTCATCCATCTGAGCAGCTGGCTCTCAC CGCATCTGGAGATCAGACTGCTCATGTCTGGAGGTACGCGGTCCAGCTGCCCACTCCTCA GCCCGTGGCCGACACGAGTCAGCTGTGTGGCGAGGACGAGGTGGAGTGCTCCGATAAGGA CGAGCCTGACGCAGACGCGGATGCGCCCAGCGACTGTCCCACCATCCGGGCGCCGCTGAC GTCTCTTAAGAGCCACCAGGGCGTGGTCATCGCTGCCGACTGGCTGGTCGGGGGGAAGCA GGCGGTGACGGCCTCCTGGGACAGGACGGCGAACCTGTACGACGTGGAGACTTCGGAGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 92-272, gnl|bosTau2|chr13 (31332069-31331889) | |
| 92-272, gnl|Hg17|chr10 (1108054-1108234) | |
| 92-272, gnl|Mm7|chr13 (8740061-8739881) | |
| 360-464, gnl|bosTau2|chr13 (31327785-31327681) | |
| 360-464, gnl|canFam2|chr2 (36756374-36756256) | |
| 360-464, gnl|danRer3|chr24 (2780877-2780999) | |
| 360-464, gnl|dasNov1|scaffold_72904 (1902-2031) | |
| 360-464, gnl|echTel1|scaffold_315837 (47492-47627) | |
| 360-464, gnl|fr1|chrUn (287278911-287278794) | |
| 360-464, gnl|galGal2|chr2 (9818617-9818754) | |
| 360-464, gnl|hg17|chr10 (1115929-1116054) | |
| 360-464, gnl|Hg17|chr10 (1115923-1116046) | |
| 360-464, gnl|loxAfr1|scaffold_104847 (193-321) | |
| 360-464, gnl|mm7|chr13 (8732904-8732787) | |
| 360-464, gnl|Mm7|chr13 (8732897-8732793) | |
| 360-464, gnl|monDom2|scaffold_7 (24722754-24722877) | |
| 360-464, gnl|oryCun1|scaffold_210297 (134521-134639) | |
| 360-464, gnl|panTro1|chr8 (1180759-1180884) | |
| 360-464, gnl|rheMac2|chr9 (1257855-1257980) | |
| 360-464, gnl|rn3|chr17 (72602747-72602864) | |
| 360-464, gnl|tetNig1|chr15 (615326-615224) | |
| 360-464, gnl|xenTro1|scaffold_378 (521685-521568) | |
| 528-665, gnl|bosTau2|chr13 (31323322-31323185) | |
| 528-665, gnl|canFam2|chr2 (36752239-36752076) | |
| 528-665, gnl|danRer3|chr24 (2790876-2791017) | |
| 528-665, gnl|dasNov1|scaffold_72904 (5679-5838) | |
| 528-665, gnl|echTel1|scaffold_315837 (51274-51451) | |
| 528-665, gnl|fr1|chrUn (266774401-266774239) | |
| 528-665, gnl|galGal2|chr2 (9821521-9821667) | |
| 528-665, gnl|hg17|chr10 (1120323-1120497) | |
| 528-665, gnl|Hg17|chr10 (1120341-1120478) | |
| 528-665, gnl|loxAfr1|scaffold_104847 (4419-4598) | |
| 528-665, gnl|mm7|chr13 (8728483-8728310) | |
| 528-665, gnl|Mm7|chr13 (8728464-8728327) | |
| 528-665, gnl|monDom2|scaffold_7 (24727314-24727474) | |
| 528-665, gnl|oryCun1|scaffold_210297 (138507-138681) | |
| 528-665, gnl|panTro1|chr8 (1185215-1185389) | |
| 528-665, gnl|rheMac2|chr9 (1262977-1263151) | |
| 528-665, gnl|rn3|chr17 (72606975-72607148) | |
| 528-665, gnl|tetNig1|chr15 (613699-613541) | |
| 528-665, gnl|xenTro1|scaffold_378 (510072-509914) | |
| 860-1080, gnl|bosTau2|chr13 (31317761-31317541) | |
| 860-1080, gnl|canFam2|chr2 (36739318-36739043) | |
| 860-1080, gnl|danRer3|chr24 (2795178-2795431) | |
| 860-1080, gnl|echTel1|scaffold_276871 (4472-4203) | |
| 860-1080, gnl|fr1|chrUn (266773429-266773166) | |
| 860-1080, gnl|galGal2|chr2 (9828234-9828511) | |
| 860-1080, gnl|hg17|chr10 (1139511-1139788) | |
| 860-1080, gnl|Hg17|chr10 (1139539-1139759) | |
| 860-1080, gnl|loxAfr1|scaffold_80269 (11359-11082) | |
| 860-1080, gnl|mm7|chr13 (8715843-8715566) | |
| 860-1080, gnl|Mm7|chr13 (8715813-8715593) | |
| 860-1080, gnl|monDom2|scaffold_7 (24747839-24748111) | |
| 860-1080, gnl|oryCun1|scaffold_210297 (163392-163670) | |
| 860-1080, gnl|panTro1|chr8 (1204742-1205019) | |
| 860-1080, gnl|rheMac2|chr9 (1282297-1282574) | |
| 860-1080, gnl|rn3|chr17 (72618207-72618484) | |
| 860-1080, gnl|tetNig1|chr15 (612574-612320) | |
| 860-1080, gnl|xenTro1|scaffold_378 (504133-503876) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 92-272, gnl|bosTau2|chr13 (31332069-31331889) | |
| 92-272, gnl|Hg17|chr10 (1108054-1108234) | |
| 92-272, gnl|Mm7|chr13 (8740061-8739881) | |
| 360-464, gnl|bosTau2|chr13 (31327785-31327681) | |
| 360-464, gnl|canFam2|chr2 (36756374-36756256) | |
| 360-464, gnl|danRer3|chr24 (2780877-2780999) | |
| 360-464, gnl|dasNov1|scaffold_72904 (1902-2031) | |
| 360-464, gnl|echTel1|scaffold_315837 (47492-47627) | |
| 360-464, gnl|fr1|chrUn (287278911-287278794) | |
| 360-464, gnl|galGal2|chr2 (9818617-9818754) | |
| 360-464, gnl|hg17|chr10 (1115929-1116054) | |
| 360-464, gnl|Hg17|chr10 (1115923-1116046) | |
| 360-464, gnl|loxAfr1|scaffold_104847 (193-321) | |
| 360-464, gnl|mm7|chr13 (8732904-8732787) | |
| 360-464, gnl|Mm7|chr13 (8732897-8732793) | |
| 360-464, gnl|monDom2|scaffold_7 (24722754-24722877) | |
| 360-464, gnl|oryCun1|scaffold_210297 (134521-134639) | |
| 360-464, gnl|panTro1|chr8 (1180759-1180884) | |
| 360-464, gnl|rheMac2|chr9 (1257855-1257980) | |
| 360-464, gnl|rn3|chr17 (72602747-72602864) | |
| 360-464, gnl|tetNig1|chr15 (615326-615224) | |
| 360-464, gnl|xenTro1|scaffold_378 (521685-521568) | |
| 528-665, gnl|bosTau2|chr13 (31323322-31323185) | |
| 528-665, gnl|canFam2|chr2 (36752239-36752076) | |
| 528-665, gnl|danRer3|chr24 (2790876-2791017) | |
| 528-665, gnl|dasNov1|scaffold_72904 (5679-5838) | |
| 528-665, gnl|echTel1|scaffold_315837 (51274-51451) | |
| 528-665, gnl|fr1|chrUn (266774401-266774239) | |
| 528-665, gnl|galGal2|chr2 (9821521-9821667) | |
| 528-665, gnl|hg17|chr10 (1120323-1120497) | |
| 528-665, gnl|Hg17|chr10 (1120341-1120478) | |
| 528-665, gnl|loxAfr1|scaffold_104847 (4419-4598) | |
| 528-665, gnl|mm7|chr13 (8728483-8728310) | |
| 528-665, gnl|Mm7|chr13 (8728464-8728327) | |
| 528-665, gnl|monDom2|scaffold_7 (24727314-24727474) | |
| 528-665, gnl|oryCun1|scaffold_210297 (138507-138681) | |
| 528-665, gnl|panTro1|chr8 (1185215-1185389) | |
| 528-665, gnl|rheMac2|chr9 (1262977-1263151) | |
| 528-665, gnl|rn3|chr17 (72606975-72607148) | |
| 528-665, gnl|tetNig1|chr15 (613699-613541) | |
| 528-665, gnl|xenTro1|scaffold_378 (510072-509914) | |
| 860-1080, gnl|bosTau2|chr13 (31317761-31317541) | |
| 860-1080, gnl|canFam2|chr2 (36739318-36739043) | |
| 860-1080, gnl|danRer3|chr24 (2795178-2795431) | |
| 860-1080, gnl|echTel1|scaffold_276871 (4472-4203) | |
| 860-1080, gnl|fr1|chrUn (266773429-266773166) | |
| 860-1080, gnl|galGal2|chr2 (9828234-9828511) | |
| 860-1080, gnl|hg17|chr10 (1139511-1139788) | |
| 860-1080, gnl|Hg17|chr10 (1139539-1139759) | |
| 860-1080, gnl|loxAfr1|scaffold_80269 (11359-11082) | |
| 860-1080, gnl|mm7|chr13 (8715843-8715566) | |
| 860-1080, gnl|Mm7|chr13 (8715813-8715593) | |
| 860-1080, gnl|monDom2|scaffold_7 (24747839-24748111) | |
| 860-1080, gnl|oryCun1|scaffold_210297 (163392-163670) | |
| 860-1080, gnl|panTro1|chr8 (1204742-1205019) | |
| 860-1080, gnl|rheMac2|chr9 (1282297-1282574) | |
| 860-1080, gnl|rn3|chr17 (72618207-72618484) | |
| 860-1080, gnl|tetNig1|chr15 (612574-612320) | |
| 860-1080, gnl|xenTro1|scaffold_378 (504133-503876) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |