Ss1.1-Ova1-OVRM10054E08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCAGCTGTAGCGAGTGATTGCTGCCGAAGGGCAGCGTCCCCCAGCAGGGCGCGGCCAC CGCTCGGCGGTGATCGCTGGGGCGGCACCGGAGCTCGGTCCTCGGCGATGGGGGCGGGAT TTTAGAAAGAAGTCCCGGACTTCGCGAGTGGATGCAGGGGGCTCTTCCTCGCCGCCTCTG CCGCCGCCGATCTGTTTGCCCAGGGGCGCTCCCACTCCTAGACTTTGTTCCTGTTTCCTT CGGCGCTGCTCGCCAAAGGCCCCGGTTGCCATGGTGAAGGAGAAAGTGGCTCATCCCCAG GACCCGCACCACCCGCCAGAGAAGCCTGTCATTCACTGCCACAAATGTGGGGAGCCATGC AAGGGCGAAGTGCTTCGGGTCCAGACCAAACATTTCCACATCAAATGTTTCACCTGCAAA GTGTGCGGCTGTGACCTGGCCCAGGGGGGCTTCTTCATAAAGAACGGAGAGTATCTGTGC ACGCTGGACTACCAGAGGATGTATGGGACACGCTGCCACGGCTGCGGGGAGTTCGTGGAA GGAGAGGTGGTGACCGCCCTGGGCAAGACCTACCATCCCAACTGCTTTGCTTGTACCATC TGCAAGCGCCCGTTTCCACCCGGAGACCGAGTCACGTTCAACGGGAGAGACTGCCTTTGC CAGCTCTGTGCACAGCCGATGTCTTCCAGCCCTAAAGAAGCCTCTTGCCCCAGCAATTGC GCTGGCTGTGGACGGGATATCAAGAACGGACAGGCGCTGCTGGCGCTGGAAAAGCAGTGG CATTTGGGCTGCTTTAAATGCAAGTCCTGCGGGAAGGTCCTTACCGGAGAATACATCAGC AAGGACGGCGCGCCGTATTGCGAAAAGGACTACCAGGGCCTCTTTGGGGTGAAGTGTGAA GCCTGTCACCAGTTTATCACAGGGAAAGTCCTGGAGGTAAGGGACAGACGGGCTCCCCTC AAAGCCAGAGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCAGCTGTAGCGAGTGATTGCTGCCGAAGGGCAGCGTCCCCCAGCAGGGCGCGGCCAC CGCTCGGCGGTGATCGCTGGGGCGGCACCGGAGCTCGGTCCTCGGCGATGGGGGCGGGAT TTTAGAAAGAAGTCCCGGACTTCGCGAGTGGATGCAGGGGGCTCTTCCTCGCCGCCTCTG CCGCCGCCGATCTGTTTGCCCAGGGGCGCTCCCACTCCTAGACTTTGTTCCTGTTTCCTT CGGCGCTGCTCGCCAAAGGCCCCGGTTGCCATGGTGAAGGAGAAAGTGGCTCATCCCCAG GACCCGCACCACCCGCCAGAGAAGCCTGTCATTCACTGCCACAAATGTGGGGAGCCATGC AAGGGCGAAGTGCTTCGGGTCCAGACCAAACATTTCCACATCAAATGTTTCACCTGCAAA GTGTGCGGCTGTGACCTGGCCCAGGGGGGCTTCTTCATAAAGAACGGAGAGTATCTGTGC ACGCTGGACTACCAGAGGATGTATGGGACACGCTGCCACGGCTGCGGGGAGTTCGTGGAA GGAGAGGTGGTGACCGCCCTGGGCAAGACCTACCATCCCAACTGCTTTGCTTGTACCATC TGCAAGCGCCCGTTTCCACCCGGAGACCGAGTCACGTTCAACGGGAGAGACTGCCTTTGC CAGCTCTGTGCACAGCCGATGTCTTCCAGCCCTAAAGAAGCCTCTTGCCCCAGCAATTGC GCTGGCTGTGGACGGGATATCAAGAACGGACAGGCGCTGCTGGCGCTGGAAAAGCAGTGG CATTTGGGCTGCTTTAAATGCAAGTCCTGCGGGAAGGTCCTTACCGGAGAATACATCAGC AAGGACGGCGCGCCGTATTGCGAAAAGGACTACCAGGGCCTCTTTGGGGTGAAGTGTGAA GCCTGTCACCAGTTTATCACAGGGAAAGTCCTGGAGGTAAGGGACAGACGGGCTCCCCTC AAAGCCAGAGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 3-286, gnl|bosTau2|chr26 (22209222-22208939) | |
| 3-286, gnl|canFam2|chr28 (28418774-28419720) | |
| 3-286, gnl|dasNov1|scaffold_697 (187978-188896) | |
| 3-286, gnl|echTel1|scaffold_222564 (1296-412) | |
| 3-286, gnl|hg17|chr10 (116380932-116381899) | |
| 3-286, gnl|Hg17|chr10 (116381958-116381651) | |
| 3-286, gnl|loxAfr1|scaffold_804 (111070-110135) | |
| 3-286, gnl|mm7|chr19 (57112667-57113475) | |
| 3-286, gnl|Mm7|chr19 (57113534-57113286) | |
| 3-286, gnl|monDom2|scaffold_14 (47258693-47257703) | |
| 3-286, gnl|oryCun1|scaffold_211643 (119217-118334) | |
| 3-286, gnl|panTro1|chr8 (118545686-118546652) | |
| 3-286, gnl|rheMac2|chr9 (114275903-114276873) | |
| 3-286, gnl|rn3|chr1 (263776426-263777222) | |
| 417-606, gnl|bosTau2|chr26 (22153038-22152849) | |
| 417-606, gnl|canFam2|chr28 (28377437-28377656) | |
| 417-606, gnl|danRer3|chr13 (40653350-40653133) | |
| 417-606, gnl|echTel1|scaffold_290876 (9142-9379) | |
| 417-606, gnl|fr1|chrUn (284084028-284084248) | |
| 417-606, gnl|galGal2|chr6 (26949455-26949676) | |
| 417-606, gnl|hg17|chr10 (116325136-116325376) | |
| 417-606, gnl|Hg17|chr10 (116325353-116325164) | |
| 417-606, gnl|loxAfr1|scaffold_804 (154254-154014) | |
| 417-606, gnl|mm7|chr19 (57071112-57071350) | |
| 417-606, gnl|Mm7|chr19 (57071327-57071138) | |
| 417-606, gnl|monDom2|scaffold_14 (47342938-47342720) | |
| 417-606, gnl|oryCun1|scaffold_200326 (1318-1080) | |
| 417-606, gnl|panTro1|chr8 (118489769-118490009) | |
| 417-606, gnl|rheMac2|chr9 (114225528-114225767) | |
| 417-606, gnl|rn3|chr1 (263731996-263732233) | |
| 417-606, gnl|tetNig1|chr17 (1464050-1464243) | |
| 417-606, gnl|xenTro1|scaffold_493 (442242-441980) | |
| 716-843, gnl|bosTau2|chr26 (22124562-22124435) | |
| 716-843, gnl|Hg17|chr10 (116297525-116297398) | |
| 716-843, gnl|Mm7|chr19 (57050695-57050568) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-286, gnl|bosTau2|chr26 (22209222-22208939) | |
| 3-286, gnl|canFam2|chr28 (28418774-28419720) | |
| 3-286, gnl|dasNov1|scaffold_697 (187978-188896) | |
| 3-286, gnl|echTel1|scaffold_222564 (1296-412) | |
| 3-286, gnl|hg17|chr10 (116380932-116381899) | |
| 3-286, gnl|Hg17|chr10 (116381958-116381651) | |
| 3-286, gnl|loxAfr1|scaffold_804 (111070-110135) | |
| 3-286, gnl|mm7|chr19 (57112667-57113475) | |
| 3-286, gnl|Mm7|chr19 (57113534-57113286) | |
| 3-286, gnl|monDom2|scaffold_14 (47258693-47257703) | |
| 3-286, gnl|oryCun1|scaffold_211643 (119217-118334) | |
| 3-286, gnl|panTro1|chr8 (118545686-118546652) | |
| 3-286, gnl|rheMac2|chr9 (114275903-114276873) | |
| 3-286, gnl|rn3|chr1 (263776426-263777222) | |
| 417-606, gnl|bosTau2|chr26 (22153038-22152849) | |
| 417-606, gnl|canFam2|chr28 (28377437-28377656) | |
| 417-606, gnl|danRer3|chr13 (40653350-40653133) | |
| 417-606, gnl|echTel1|scaffold_290876 (9142-9379) | |
| 417-606, gnl|fr1|chrUn (284084028-284084248) | |
| 417-606, gnl|galGal2|chr6 (26949455-26949676) | |
| 417-606, gnl|hg17|chr10 (116325136-116325376) | |
| 417-606, gnl|Hg17|chr10 (116325353-116325164) | |
| 417-606, gnl|loxAfr1|scaffold_804 (154254-154014) | |
| 417-606, gnl|mm7|chr19 (57071112-57071350) | |
| 417-606, gnl|Mm7|chr19 (57071327-57071138) | |
| 417-606, gnl|monDom2|scaffold_14 (47342938-47342720) | |
| 417-606, gnl|oryCun1|scaffold_200326 (1318-1080) | |
| 417-606, gnl|panTro1|chr8 (118489769-118490009) | |
| 417-606, gnl|rheMac2|chr9 (114225528-114225767) | |
| 417-606, gnl|rn3|chr1 (263731996-263732233) | |
| 417-606, gnl|tetNig1|chr17 (1464050-1464243) | |
| 417-606, gnl|xenTro1|scaffold_493 (442242-441980) | |
| 716-843, gnl|bosTau2|chr26 (22124562-22124435) | |
| 716-843, gnl|Hg17|chr10 (116297525-116297398) | |
| 716-843, gnl|Mm7|chr19 (57050695-57050568) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) |