Ss1.1-Ova1-OVRM10055F07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCTGGGCGAAGGTCCTAGGGCTTCTGGACCTGACTCACAAGAAATCAACTCTGCAGAC CCTGTTACGCCGGGAACCAGGATGGAGAGTAGGTGCTACGGCTGCGCTGTCAAGTTCACC ATCTTCAAAAAGGAGTACGGCTGTAAGAACTGTGGCCGGGCGTTCTGTTCCGGCTGCCTT AGCTTCAGTGCAGTGGTGCCCCGGGCTGGAAACACGCAACAGAAAGTCTGCAAGCAGTGC CATGAGGTCCTGACCAGAGGATCTTCTCCTGCCAATGCCTCCAAGTGGTCACCACCTCAG AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAGCAGAAGCCCAGCACTCCCCAGAGC CATGGACTGACCCAGCAAGACCAAGTCATTGCTGAGCGCCTAGCACGGCTCCGCCGGGAG AACAAGCCCAAGTCAGTGCCCTCTCAGGCAGAGATAGAAGCGAGGCTAGCTGCACTGAGG GATGAACCCCAGGGTTCCATCCCTGCCACCCGGGAGATGGAAGCACGGCTTGCTGCACTG CAGGATAGAGTTCCATCTTCTCAGACCCCTCAGTGGGCACATCAGCCACCAGACACTAGG ACCCAGGCCCAGCAGGCACAGGATCTGCTGACACAGTTAGCAGCGGAGGTGGCTATTGAT GAGCACCGGGAACGAGGAAGCCCAGCTGCCTCTACCCAGAATGACCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCTGGGCGAAGGTCCTAGGGCTTCTGGACCTGACTCACAAGAAATCAACTCTGCAGAC CCTGTTACGCCGGGAACCAGGATGGAGAGTAGGTGCTACGGCTGCGCTGTCAAGTTCACC ATCTTCAAAAAGGAGTACGGCTGTAAGAACTGTGGCCGGGCGTTCTGTTCCGGCTGCCTT AGCTTCAGTGCAGTGGTGCCCCGGGCTGGAAACACGCAACAGAAAGTCTGCAAGCAGTGC CATGAGGTCCTGACCAGAGGATCTTCTCCTGCCAATGCCTCCAAGTGGTCACCACCTCAG AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAGCAGAAGCCCAGCACTCCCCAGAGC CATGGACTGACCCAGCAAGACCAAGTCATTGCTGAGCGCCTAGCACGGCTCCGCCGGGAG AACAAGCCCAAGTCAGTGCCCTCTCAGGCAGAGATAGAAGCGAGGCTAGCTGCACTGAGG GATGAACCCCAGGGTTCCATCCCTGCCACCCGGGAGATGGAAGCACGGCTTGCTGCACTG CAGGATAGAGTTCCATCTTCTCAGACCCCTCAGTGGGCACATCAGCCACCAGACACTAGG ACCCAGGCCCAGCAGGCACAGGATCTGCTGACACAGTTAGCAGCGGAGGTGGCTATTGAT GAGCACCGGGAACGAGGAAGCCCAGCTGCCTCTACCCAGAATGACCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 134-257, gnl|bosTau2|chr10 (26683827-26683950) | |
| 134-257, gnl|canFam2|chr30 (10935789-10935931) | |
| 134-257, gnl|dasNov1|scaffold_12152 (5317-5175) | |
| 134-257, gnl|echTel1|scaffold_315379 (42609-42467) | |
| 134-257, gnl|fr1|chrUn (59977121-59977261) | |
| 134-257, gnl|hg17|chr15 (38888600-38888742) | |
| 134-257, gnl|Hg17|chr15 (38888607-38888730) | |
| 134-257, gnl|loxAfr1|scaffold_2794 (16659-16800) | |
| 134-257, gnl|mm7|chr2 (118951322-118951464) | |
| 134-257, gnl|Mm7|chr2 (118951329-118951452) | |
| 134-257, gnl|monDom2|scaffold_12 (1393797-1393653) | |
| 134-257, gnl|oryCun1|scaffold_211631 (50806-50948) | |
| 134-257, gnl|panTro1|chr16 (38802098-38802240) | |
| 134-257, gnl|rheMac2|chr7 (19189845-19189987) | |
| 134-257, gnl|rn3|chr3 (105620313-105620455) | |
| 134-257, gnl|tetNig1|chrUn_random (104308470-104308328) | |
| 312-430, gnl|bosTau2|chr10 (26684557-26684676) | |
| 312-430, gnl|Hg17|chr15 (38889342-38889460) | |
| 312-430, gnl|Mm7|chr2 (118952030-118952148) | |
| 431-573, gnl|bosTau2|chr10 (26684773-26684915) | |
| 431-573, gnl|canFam2|chr30 (10936754-10936906) | |
| 431-573, gnl|dasNov1|scaffold_12152 (3925-3773) | |
| 431-573, gnl|echTel1|scaffold_266467 (523-676) | |
| 431-573, gnl|fr1|chrUn (59977806-59977955) | |
| 431-573, gnl|hg17|chr15 (38889560-38889712) | |
| 431-573, gnl|Hg17|chr15 (38889561-38889703) | |
| 431-573, gnl|loxAfr1|scaffold_2794 (17610-17762) | |
| 431-573, gnl|mm7|chr2 (118952246-118952398) | |
| 431-573, gnl|Mm7|chr2 (118952247-118952389) | |
| 431-573, gnl|monDom2|scaffold_12 (1392119-1391967) | |
| 431-573, gnl|oryCun1|scaffold_211631 (51775-51927) | |
| 431-573, gnl|panTro1|chr16 (38803058-38803210) | |
| 431-573, gnl|rheMac2|chr7 (19190805-19190957) | |
| 431-573, gnl|rn3|chr3 (105621173-105621325) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 134-257, gnl|bosTau2|chr10 (26683827-26683950) | |
| 134-257, gnl|canFam2|chr30 (10935789-10935931) | |
| 134-257, gnl|dasNov1|scaffold_12152 (5317-5175) | |
| 134-257, gnl|echTel1|scaffold_315379 (42609-42467) | |
| 134-257, gnl|fr1|chrUn (59977121-59977261) | |
| 134-257, gnl|hg17|chr15 (38888600-38888742) | |
| 134-257, gnl|Hg17|chr15 (38888607-38888730) | |
| 134-257, gnl|loxAfr1|scaffold_2794 (16659-16800) | |
| 134-257, gnl|mm7|chr2 (118951322-118951464) | |
| 134-257, gnl|Mm7|chr2 (118951329-118951452) | |
| 134-257, gnl|monDom2|scaffold_12 (1393797-1393653) | |
| 134-257, gnl|oryCun1|scaffold_211631 (50806-50948) | |
| 134-257, gnl|panTro1|chr16 (38802098-38802240) | |
| 134-257, gnl|rheMac2|chr7 (19189845-19189987) | |
| 134-257, gnl|rn3|chr3 (105620313-105620455) | |
| 134-257, gnl|tetNig1|chrUn_random (104308470-104308328) | |
| 312-430, gnl|bosTau2|chr10 (26684557-26684676) | |
| 312-430, gnl|Hg17|chr15 (38889342-38889460) | |
| 312-430, gnl|Mm7|chr2 (118952030-118952148) | |
| 431-573, gnl|bosTau2|chr10 (26684773-26684915) | |
| 431-573, gnl|canFam2|chr30 (10936754-10936906) | |
| 431-573, gnl|dasNov1|scaffold_12152 (3925-3773) | |
| 431-573, gnl|echTel1|scaffold_266467 (523-676) | |
| 431-573, gnl|fr1|chrUn (59977806-59977955) | |
| 431-573, gnl|hg17|chr15 (38889560-38889712) | |
| 431-573, gnl|Hg17|chr15 (38889561-38889703) | |
| 431-573, gnl|loxAfr1|scaffold_2794 (17610-17762) | |
| 431-573, gnl|mm7|chr2 (118952246-118952398) | |
| 431-573, gnl|Mm7|chr2 (118952247-118952389) | |
| 431-573, gnl|monDom2|scaffold_12 (1392119-1391967) | |
| 431-573, gnl|oryCun1|scaffold_211631 (51775-51927) | |
| 431-573, gnl|panTro1|chr16 (38803058-38803210) | |
| 431-573, gnl|rheMac2|chr7 (19190805-19190957) | |
| 431-573, gnl|rn3|chr3 (105621173-105621325) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |