Non-Coding RNA Search

Ss1.1-Ova1-OVRM10056H04.5

Sequence:


               
               GCTTTCTTCAGTGCCGCTTCCTCTTTGCTGGGCCGTGGTTACTCTTCAGTGAAATCTCCT
TCATCTCTGATGTTGTGAATGACTCCTCCCTGGCTCTGGGGGGCACCTACCCACCAGCCC
CCTGGTGGCCACCTGGCCCACCTCCCACCAACTTCAGCAGCTTGGAGCTCGAGCCCAGGG
GCCAGCAGCCCGTGGCCAAGGCTGAGGGAAGCCCAACTGCCATCCTCATCGGCTGCCTCG
TGGCCATCATCCTGCTGCTGCTGCTCATCATCGCCCTCATGCTGTGGCGGCTGCACTGGC
GCAGGCTCCTCAGCAAGGCCGAGCGTCGGGTATTGGAAGAGGAGCTGACGGTTCATCTCT
CTGTCCCTGGGGACACCATCCTCATCAACAACCGCCCAGGCTCTCGAGAGCCACCCCCTT
ACCAGGAGCCTCGGCCGCGTGGGAATCCACCCCACTCTGCTCCCAGTGTCCCCAACAGCT
CTGCGTTGCTGCTCTCCAATCCAGCCTACCGTCTCCCGGGCGCCCCACTTCTGCCCCCAC
CTCCCCAGAACAGCGTCCCCCATTATGCCGAGGCTGACATTGTCACCCTGCAGGGTGTCA
CGGGGGGCAACACCTATGCTGTGCCTGCACTGCCCCCAGGGGCAGCTGGGGATGGTCCCC
CCAGAGTGGATTTCCCTCGGTCGAGGCTCCGTTTTAAGGAGAAGCTTGGCGAGGGCCAGT
TTGGGGAGGTGCATCTGTGTGAGGTAGAGAGCCCTCAAGATCTGGTCAGTCTTGATTTCC
CTCTCAGTGTGCGCAAGGGACAGCCCTTGCTGGTAGCTGTCAAGATTCTACGGCCAGATG
CCACCAAGAATGCCAGGAATGACTTCCTGAAAGAGGTGAAGATCATGTCGAGGCTAAAGG
ACCCAAACATCATCCGGCTCCTGGGCGTGTGTGTGCAGGATGACCCTCTCTGCATGATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTCTTCAGTGCCGCTTCCTCTTTGCTGGGCCGTGGTTACTCTTCAGTGAAATCTCCT
TCATCTCTGATGTTGTGAATGACTCCTCCCTGGCTCTGGGGGGCACCTACCCACCAGCCC
CCTGGTGGCCACCTGGCCCACCTCCCACCAACTTCAGCAGCTTGGAGCTCGAGCCCAGGG
GCCAGCAGCCCGTGGCCAAGGCTGAGGGAAGCCCAACTGCCATCCTCATCGGCTGCCTCG
TGGCCATCATCCTGCTGCTGCTGCTCATCATCGCCCTCATGCTGTGGCGGCTGCACTGGC
GCAGGCTCCTCAGCAAGGCCGAGCGTCGGGTATTGGAAGAGGAGCTGACGGTTCATCTCT
CTGTCCCTGGGGACACCATCCTCATCAACAACCGCCCAGGCTCTCGAGAGCCACCCCCTT
ACCAGGAGCCTCGGCCGCGTGGGAATCCACCCCACTCTGCTCCCAGTGTCCCCAACAGCT
CTGCGTTGCTGCTCTCCAATCCAGCCTACCGTCTCCCGGGCGCCCCACTTCTGCCCCCAC
CTCCCCAGAACAGCGTCCCCCATTATGCCGAGGCTGACATTGTCACCCTGCAGGGTGTCA
CGGGGGGCAACACCTATGCTGTGCCTGCACTGCCCCCAGGGGCAGCTGGGGATGGTCCCC
CCAGAGTGGATTTCCCTCGGTCGAGGCTCCGTTTTAAGGAGAAGCTTGGCGAGGGCCAGT
TTGGGGAGGTGCATCTGTGTGAGGTAGAGAGCCCTCAAGATCTGGTCAGTCTTGATTTCC
CTCTCAGTGTGCGCAAGGGACAGCCCTTGCTGGTAGCTGTCAAGATTCTACGGCCAGATG
CCACCAAGAATGCCAGGAATGACTTCCTGAAAGAGGTGAAGATCATGTCGAGGCTAAAGG
ACCCAAACATCATCCGGCTCCTGGGCGTGTGTGTGCAGGATGACCCTCTCTGCATGATTA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q96T62_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q96T62_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               165-318, gnl|bosTau2|chr23 (20683528-20683375)
               

               
               165-318, gnl|Hg17|chr6 (30969027-30969180)
               

               
               165-318, gnl|Mm7|chr17 (33789691-33789538)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               165-318, gnl|bosTau2|chr23 (20683528-20683375)
               

               
               165-318, gnl|Hg17|chr6 (30969027-30969180)
               

               
               165-318, gnl|Mm7|chr17 (33789691-33789538)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               jej (0.0989218)

	165-318, gnl\|bosTau2\|chr23 (20683528-20683375)
	165-318, gnl\|Hg17\|chr6 (30969027-30969180)
	165-318, gnl\|Mm7\|chr17 (33789691-33789538)