Non-Coding RNA Search

Ss1.1-Ova1-OVRM10057G04.5

Sequence:


               
               TTGTGTTTCACGCCGTAGTTTGGTCCGAGGCCTCCGGAGCTTTCCCGGGGCAGTCGGCAG
AAGCCGCCGCGACCGCCCCGCCCCTCCCCTCCGTCCCTGGGACCGGGAGGGACCCAGACC
GCGTCACGCCCCTCGGCGCTCAACCTTCCCTTCTCTGTCGTTGCGTCCGCATCGCTTCCC
CGGAATCGGACGGTACCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGA
TCGTGAGATCACGTACTATAGGTGAACTTTTAGCTCCAGCAGCTCCTTTTGACAAGAAAT
GTGGTCGTGAAAATTGGACGGTTGCTTTTGCTCCAGATGGTTCATACTTTGCTTGGTCTC
AAGGACATCGCACAGTAAAGCTTGTTCCGTGGTCCCAGTGCCTTAAGAACTTTCTCTTGC
ATGGCACCAAGAATATCACCAATTCAAGCAGTTTAAGGTTGTCAAGACAAAACAGTGATG
GTGGTCAGAAAAATAAGCCTCGTGAACATATTATAGACTGTGGCGATATCGTCTGGAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTGTTTCACGCCGTAGTTTGGTCCGAGGCCTCCGGAGCTTTCCCGGGGCAGTCGGCAG
AAGCCGCCGCGACCGCCCCGCCCCTCCCCTCCGTCCCTGGGACCGGGAGGGACCCAGACC
GCGTCACGCCCCTCGGCGCTCAACCTTCCCTTCTCTGTCGTTGCGTCCGCATCGCTTCCC
CGGAATCGGACGGTACCCCATAGATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGA
TCGTGAGATCACGTACTATAGGTGAACTTTTAGCTCCAGCAGCTCCTTTTGACAAGAAAT
GTGGTCGTGAAAATTGGACGGTTGCTTTTGCTCCAGATGGTTCATACTTTGCTTGGTCTC
AAGGACATCGCACAGTAAAGCTTGTTCCGTGGTCCCAGTGCCTTAAGAACTTTCTCTTGC
ATGGCACCAAGAATATCACCAATTCAAGCAGTTTAAGGTTGTCAAGACAAAACAGTGATG
GTGGTCAGAAAAATAAGCCTCGTGAACATATTATAGACTGTGGCGATATCGTCTGGAGTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-265, gnl|bosTau2|chr19 (9455231-9454966)
               

               
               2-265, gnl|Hg17|chr17 (22645345-22645609)
               

               
               2-265, gnl|Mm7|chr11 (79336172-79335905)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-265, gnl|bosTau2|chr19 (9455231-9454966)
               

               
               2-265, gnl|Hg17|chr17 (22645345-22645609)
               

               
               2-265, gnl|Mm7|chr11 (79336172-79335905)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               eru (0.240096)
               

               
               nco (0.161734)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.240096)
               

               
               nco (0.161734)
               

               
               cty (0.10408)

	2-265, gnl\|bosTau2\|chr19 (9455231-9454966)
	2-265, gnl\|Hg17\|chr17 (22645345-22645609)
	2-265, gnl\|Mm7\|chr11 (79336172-79335905)