Ss1.1-Ova1-OVRM10070E08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCCAGCGAGCGAGCACTCGGCTGCAGCCAGAACTATTGCCGCCTGGGACGCGGGGTGG GAGACAGGAGCCCCGGGGGTGCTCTCAGCGGACCGACCCAGGCAGCAAGGTGGGGGGCCC TACAGCGATGCTCCGAGGCATGTACCTCACTCGGAACGGGAACCTCCAGAGGCGGCACAC CATGAAGGAAGCCAAGGACATGAAGAACAAGCTGGGCATCTTCAGGCGGCGGAACGAATC CCCTGGGGCCCAGCCAGCGGGCAAGACAGACAAAGTGATGAAGTCATTCAAGCCCACCTC AGAGGAAGCACTCAAGTGGGGCGAGTCCTTGGAGAAGCTGCTGGTCCACAAATATGGCTT AGCGGTCTTCCAAGCCTTCCTTCGCACCGAGTTTAGTGAGGAGAACCTGGAATTCTGGCT GGCATGCGAGGACTTCAAGAAGGTCAAGTCACAGTCCAAGATGGCAGCCAAGGCCAAGAA GATCTTTGCTGAGTATATCGCCATCCAGGCCTGCAAGGAGGTAAACCTGGACTCATACAC ACGGGAACACACCAAGGACAACCTGCAGAGCGTCACGCGGGGCTGCTTTGATCTGGCGCA GAAGCGTATCTTTGGGCTCATGGAGAAGGACTCGTACCCACGCTTCCTCCGCTCTGACCT CTACCTGGACCTCATTAACCAGAAGAAGATGAGTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCCAGCGAGCGAGCACTCGGCTGCAGCCAGAACTATTGCCGCCTGGGACGCGGGGTGG GAGACAGGAGCCCCGGGGGTGCTCTCAGCGGACCGACCCAGGCAGCAAGGTGGGGGGCCC TACAGCGATGCTCCGAGGCATGTACCTCACTCGGAACGGGAACCTCCAGAGGCGGCACAC CATGAAGGAAGCCAAGGACATGAAGAACAAGCTGGGCATCTTCAGGCGGCGGAACGAATC CCCTGGGGCCCAGCCAGCGGGCAAGACAGACAAAGTGATGAAGTCATTCAAGCCCACCTC AGAGGAAGCACTCAAGTGGGGCGAGTCCTTGGAGAAGCTGCTGGTCCACAAATATGGCTT AGCGGTCTTCCAAGCCTTCCTTCGCACCGAGTTTAGTGAGGAGAACCTGGAATTCTGGCT GGCATGCGAGGACTTCAAGAAGGTCAAGTCACAGTCCAAGATGGCAGCCAAGGCCAAGAA GATCTTTGCTGAGTATATCGCCATCCAGGCCTGCAAGGAGGTAAACCTGGACTCATACAC ACGGGAACACACCAAGGACAACCTGCAGAGCGTCACGCGGGGCTGCTTTGATCTGGCGCA GAAGCGTATCTTTGGGCTCATGGAGAAGGACTCGTACCCACGCTTCCTCCGCTCTGACCT CTACCTGGACCTCATTAACCAGAAGAAGATGAGTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 4-189, gnl|bosTau2|chr8 (52654787-52654605) | |
| 4-189, gnl|Hg17|chr9 (113435981-113436172) | |
| 4-189, gnl|Mm7|chr4 (62133390-62133590) | |
| 190-292, gnl|bosTau2|chr8 (52654506-52654404) | |
| 190-292, gnl|canFam2|chr11 (70947812-70947901) | |
| 190-292, gnl|danRer3|chr5 (73282089-73282178) | |
| 190-292, gnl|dasNov1|scaffold_12808 (46253-46342) | |
| 190-292, gnl|echTel1|scaffold_264825 (12516-12605) | |
| 190-292, gnl|fr1|chrUn (167718460-167718549) | |
| 190-292, gnl|galGal2|chr8 (3617820-3617912) | |
| 190-292, gnl|hg17|chr9 (113436262-113436351) | |
| 190-292, gnl|Hg17|chr9 (113436264-113436366) | |
| 190-292, gnl|loxAfr1|scaffold_9356 (22329-22240) | |
| 190-292, gnl|mm7|chr4 (62133692-62133781) | |
| 190-292, gnl|Mm7|chr4 (62133694-62133796) | |
| 190-292, gnl|monDom2|scaffold_51 (1174438-1174349) | |
| 190-292, gnl|oryCun1|scaffold_195475 (1323-1234) | |
| 190-292, gnl|panTro1|chr11 (97971061-97971150) | |
| 190-292, gnl|rn3|chr5 (79711037-79711126) | |
| 190-292, gnl|tetNig1|chr4 (5060742-5060653) | |
| 340-523, gnl|bosTau2|chr8 (52653379-52653196) | |
| 340-523, gnl|Hg17|chr9 (113437421-113437602) | |
| 340-523, gnl|Mm7|chr4 (62134716-62134899) | |
| 354-522, gnl|bosTau2|chr16 (46170317-46170149) | |
| 354-522, gnl|canFam2|chr7 (18973765-18973973) | |
| 354-522, gnl|danRer3|chrUn (14587000-14586801) | |
| 354-522, gnl|dasNov1|scaffold_540 (34512-34718) | |
| 354-522, gnl|echTel1|scaffold_301876 (136649-136441) | |
| 354-522, gnl|fr1|chrUn (46599412-46599202) | |
| 354-522, gnl|galGal2|chr8 (5623195-5622992) | |
| 354-522, gnl|hg17|chr1 (179302754-179302961) | |
| 354-522, gnl|Hg17|chr1 (179302924-179302756) | |
| 354-522, gnl|loxAfr1|scaffold_230299 (172-380) | |
| 354-522, gnl|mm7|chr1 (153703115-153702911) | |
| 354-522, gnl|Mm7|chr1 (153702943-153703111) | |
| 354-522, gnl|monDom2|scaffold_16 (36238460-36238670) | |
| 354-522, gnl|oryCun1|scaffold_204890 (14690-14900) | |
| 354-522, gnl|panTro1|chr1 (161711625-161711832) | |
| 354-522, gnl|rheMac2|chr1 (188057954-188057747) | |
| 354-522, gnl|rn3|chr13 (68823628-68823422) | |
| 354-522, gnl|tetNig1|chr15 (3409317-3409147) | |
| 354-522, gnl|xenTro1|scaffold_349 (558834-558633) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-189, gnl|bosTau2|chr8 (52654787-52654605) | |
| 4-189, gnl|Hg17|chr9 (113435981-113436172) | |
| 4-189, gnl|Mm7|chr4 (62133390-62133590) | |
| 190-292, gnl|bosTau2|chr8 (52654506-52654404) | |
| 190-292, gnl|canFam2|chr11 (70947812-70947901) | |
| 190-292, gnl|danRer3|chr5 (73282089-73282178) | |
| 190-292, gnl|dasNov1|scaffold_12808 (46253-46342) | |
| 190-292, gnl|echTel1|scaffold_264825 (12516-12605) | |
| 190-292, gnl|fr1|chrUn (167718460-167718549) | |
| 190-292, gnl|galGal2|chr8 (3617820-3617912) | |
| 190-292, gnl|hg17|chr9 (113436262-113436351) | |
| 190-292, gnl|Hg17|chr9 (113436264-113436366) | |
| 190-292, gnl|loxAfr1|scaffold_9356 (22329-22240) | |
| 190-292, gnl|mm7|chr4 (62133692-62133781) | |
| 190-292, gnl|Mm7|chr4 (62133694-62133796) | |
| 190-292, gnl|monDom2|scaffold_51 (1174438-1174349) | |
| 190-292, gnl|oryCun1|scaffold_195475 (1323-1234) | |
| 190-292, gnl|panTro1|chr11 (97971061-97971150) | |
| 190-292, gnl|rn3|chr5 (79711037-79711126) | |
| 190-292, gnl|tetNig1|chr4 (5060742-5060653) | |
| 340-523, gnl|bosTau2|chr8 (52653379-52653196) | |
| 340-523, gnl|Hg17|chr9 (113437421-113437602) | |
| 340-523, gnl|Mm7|chr4 (62134716-62134899) | |
| 354-522, gnl|bosTau2|chr16 (46170317-46170149) | |
| 354-522, gnl|canFam2|chr7 (18973765-18973973) | |
| 354-522, gnl|danRer3|chrUn (14587000-14586801) | |
| 354-522, gnl|dasNov1|scaffold_540 (34512-34718) | |
| 354-522, gnl|echTel1|scaffold_301876 (136649-136441) | |
| 354-522, gnl|fr1|chrUn (46599412-46599202) | |
| 354-522, gnl|galGal2|chr8 (5623195-5622992) | |
| 354-522, gnl|hg17|chr1 (179302754-179302961) | |
| 354-522, gnl|Hg17|chr1 (179302924-179302756) | |
| 354-522, gnl|loxAfr1|scaffold_230299 (172-380) | |
| 354-522, gnl|mm7|chr1 (153703115-153702911) | |
| 354-522, gnl|Mm7|chr1 (153702943-153703111) | |
| 354-522, gnl|monDom2|scaffold_16 (36238460-36238670) | |
| 354-522, gnl|oryCun1|scaffold_204890 (14690-14900) | |
| 354-522, gnl|panTro1|chr1 (161711625-161711832) | |
| 354-522, gnl|rheMac2|chr1 (188057954-188057747) | |
| 354-522, gnl|rn3|chr13 (68823628-68823422) | |
| 354-522, gnl|tetNig1|chr15 (3409317-3409147) | |
| 354-522, gnl|xenTro1|scaffold_349 (558834-558633) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.245128) | |
| eru (0.120048) |