Non-Coding RNA Search

Ss1.1-Ova1-OVRM10072F01.5

Sequence:


               
               CTAAGAACTTTGCAAGGTATCTGTCCTGAAAGCTGCTAATTTATGGTCTAGCAGATTTAT
ATTATATGCAGATAATAATTAACTGGGGATAAAAGCAAGACAAGGGTGACACAGAGTAGG
CAACTAAATGCTCCAATAGCAACCCCAAACTACCTCGCAGCCTGCATTTTGTACGGTAGA
AGGAAGTTTTTGTCATTCTCTTTTTTCAGACCTGGAACTGAATTGTGTATGATTTCCCGC
TGCTGCTGAAGCCACCTATAGAGGACATGCTGGCCAGTGTGCCCTGTCATGTATCTGTAC
ACAACATAAAATAAGTTGGTGGTTTTGTTTTGGTGTGGTAGAGATTTTTGTTGTGCAGTT
TTGCCTTTATAGATTATATGCCAAGATAGTATTTGATAAGTCAGTGGCATCTGAATGGCA
TTTGGGTATTTCCTTCAAAGAATTTTATTTGACCTGAATTTCTTAGAAAGTTATGTTAGG
GATTTCGTTTTTTTTTTTGTTTTTTTTTTTTTAGCCCCCCCACCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAAGAACTTTGCAAGGTATCTGTCCTGAAAGCTGCTAATTTATGGTCTAGCAGATTTAT
ATTATATGCAGATAATAATTAACTGGGGATAAAAGCAAGACAAGGGTGACACAGAGTAGG
CAACTAAATGCTCCAATAGCAACCCCAAACTACCTCGCAGCCTGCATTTTGTACGGTAGA
AGGAAGTTTTTGTCATTCTCTTTTTTCAGACCTGGAACTGAATTGTGTATGATTTCCCGC
TGCTGCTGAAGCCACCTATAGAGGACATGCTGGCCAGTGTGCCCTGTCATGTATCTGTAC
ACAACATAAAATAAGTTGGTGGTTTTGTTTTGGTGTGGTAGAGATTTTTGTTGTGCAGTT
TTGCCTTTATAGATTATATGCCAAGATAGTATTTGATAAGTCAGTGGCATCTGAATGGCA
TTTGGGTATTTCCTTCAAAGAATTTTATTTGACCTGAATTTCTTAGAAAGTTATGTTAGG
GATTTCGTTTTTTTTTTTGTTTTTTTTTTTTTAGCCCCCCCACCCCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-296, gnl|bosTau2|chr15 (49488603-49488305)
               

               
               1-296, gnl|Hg17|chr4 (95944535-95944843)
               

               
               1-296, gnl|Mm7|chr3 (142134125-142133823)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-296, gnl|bosTau2|chr15 (49488603-49488305)
               

               
               1-296, gnl|Hg17|chr4 (95944535-95944843)
               

               
               1-296, gnl|Mm7|chr3 (142134125-142133823)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-296, gnl\|bosTau2\|chr15 (49488603-49488305)
	1-296, gnl\|Hg17\|chr4 (95944535-95944843)
	1-296, gnl\|Mm7\|chr3 (142134125-142133823)