Non-Coding RNA Search

Ss1.1-Ova1-OVRM10074E05.5

Sequence:


               
               CGTCAGCCGACTTGACCTCTTAGATCAGGTATTTTACTGCAAACTATTGGAAGAAGCAAA
TCGAGGCTCATTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATCAATAAA
TGCCTTCCATAGTAAATTCCTATTGCCAGAGCTGGAGAAGAGAATGCAAGAATGGGAAAC
GACTCCTAGAATTGGTGACATCCTTCAGAAATTGGCACCATTCCTTAAGATGTATGGAGA
ATATGTGAAGGGGTTTGATAATGCAATGGAATTGGTTAAAAACATGACAGAGCGTATTCC
CCAGTTCAAGTCAGTAGTTGAAGAAATTCAGAAACAGAAGATCTGCGGGAACTTGACTTT
GCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGA
TTACCTAAGGAAACTGCCCCCTGATTCTCTGGACTGGAATGATGCTAAAAAATCACTTGA
AATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAAGAAAAATGGAGAACCTAAA
GAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAATCCTTCAAA
CGAACTAATAAAAGAAGGACAGATCCTCAAGCTAGCTGCTCGGAACACATCAGCACAAGA
ACGCTACCTTTTCTTATTCAACAACATGTTGCTGTACTGTGTGCCAAGATTCAGCTTGGT
GGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATCGATGGAATGAAAATTGTGGAGAC
TCACAATGAAGAATATCCACATACTTTCCAGGTATCTGGGAAAGAGAGGACACTGGAACT
ACAAGCCAGCTCTGAGCAAGATAAAGAGGAATGGATCAAGGCACTTCAAGAGACTATTGA
TGCTTTCCATCAGAGGCATGAAACCTTCAGAAATGCAATTGCCAAGGATAATGACATTCA
GTCAGAGGTTTCTACTGCTGAACTAGGAAAAAGGGCTCCAAGATGGATCCGAGATAATGA
AGTTACGATGTGTATGAAATGCAAAGAGCCTTTTAATGCACTGACACGGAGAAGGCATCA
TTGTCGAGCATGTGGTCATGTGGTTTGTTGGAAGTGTTCTGACTATAAAGCTCAACTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTCAGCCGACTTGACCTCTTAGATCAGGTATTTTACTGCAAACTATTGGAAGAAGCAAA
TCGAGGCTCATTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATCAATAAA
TGCCTTCCATAGTAAATTCCTATTGCCAGAGCTGGAGAAGAGAATGCAAGAATGGGAAAC
GACTCCTAGAATTGGTGACATCCTTCAGAAATTGGCACCATTCCTTAAGATGTATGGAGA
ATATGTGAAGGGGTTTGATAATGCAATGGAATTGGTTAAAAACATGACAGAGCGTATTCC
CCAGTTCAAGTCAGTAGTTGAAGAAATTCAGAAACAGAAGATCTGCGGGAACTTGACTTT
GCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGA
TTACCTAAGGAAACTGCCCCCTGATTCTCTGGACTGGAATGATGCTAAAAAATCACTTGA
AATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAAGAAAAATGGAGAACCTAAA
GAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAATCCTTCAAA
CGAACTAATAAAAGAAGGACAGATCCTCAAGCTAGCTGCTCGGAACACATCAGCACAAGA
ACGCTACCTTTTCTTATTCAACAACATGTTGCTGTACTGTGTGCCAAGATTCAGCTTGGT
GGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATCGATGGAATGAAAATTGTGGAGAC
TCACAATGAAGAATATCCACATACTTTCCAGGTATCTGGGAAAGAGAGGACACTGGAACT
ACAAGCCAGCTCTGAGCAAGATAAAGAGGAATGGATCAAGGCACTTCAAGAGACTATTGA
TGCTTTCCATCAGAGGCATGAAACCTTCAGAAATGCAATTGCCAAGGATAATGACATTCA
GTCAGAGGTTTCTACTGCTGAACTAGGAAAAAGGGCTCCAAGATGGATCCGAGATAATGA
AGTTACGATGTGTATGAAATGCAAAGAGCCTTTTAATGCACTGACACGGAGAAGGCATCA
TTGTCGAGCATGTGGTCATGTGGTTTGTTGGAAGTGTTCTGACTATAAAGCTCAACTTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34451651|gb|AAQ72372.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34451651|gb|AAQ72372.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               174-339, gnl|bosTau2|chr5 (47204976-47204809)
               

               
               174-339, gnl|Hg17|chr12 (32646361-32646527)
               

               
               174-339, gnl|Mm7|chr16 (16021635-16021468)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               174-339, gnl|bosTau2|chr5 (47204976-47204809)
               

               
               174-339, gnl|Hg17|chr12 (32646361-32646527)
               

               
               174-339, gnl|Mm7|chr16 (16021635-16021468)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	174-339, gnl\|bosTau2\|chr5 (47204976-47204809)
	174-339, gnl\|Hg17\|chr12 (32646361-32646527)
	174-339, gnl\|Mm7\|chr16 (16021635-16021468)