Non-Coding RNA Search

Ss1.1-Ova1-OVRM10075G11.5

Sequence:


               
               TACAGAGAACAGTAATTATCATACGAAGAGCAAGAAAGGCAAAGAAAATCCTTTTCGTTT
TCAATTGGGCAATTAAGCAGAAACTGCAAATTATAGTATGAAGAAGGGAGGGGGAAGAAC
AAGCCGGATCAGAAGACGAAAACGCTTTGGGAATGCTGAATCAAGAGGAGTGAATGAGAG
CTACAAGCCTGAATTTATAGAGCTGAAGAAGTGGCTGAAAGATAGGAACTTTGAAGATAC
AAACTTAATACCTGCTCGTTTTCCAGGTACAGGAAGGGGGCTGATGAGCAAAACATCCCT
ACAGGTGGCAGCCTCCTCCATCCCCGCTGCTGGCTCTGTGCACCTTTTTAGTTTCAGAAA
AGCATGCTGGGGATCAGTCTCCCTGGAAGCCGTACCTGGAGGTTTTGCCGAAGACCTACA
CCTGCCCTGTTTGTTTGGAACCGGAAGTGGTGAATCTCCTTCCCGGACCATTGAAATCAA
AGGCCAGAGAGCAGAGAACCCGCGTGTGGGAGTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAGAGAACAGTAATTATCATACGAAGAGCAAGAAAGGCAAAGAAAATCCTTTTCGTTT
TCAATTGGGCAATTAAGCAGAAACTGCAAATTATAGTATGAAGAAGGGAGGGGGAAGAAC
AAGCCGGATCAGAAGACGAAAACGCTTTGGGAATGCTGAATCAAGAGGAGTGAATGAGAG
CTACAAGCCTGAATTTATAGAGCTGAAGAAGTGGCTGAAAGATAGGAACTTTGAAGATAC
AAACTTAATACCTGCTCGTTTTCCAGGTACAGGAAGGGGGCTGATGAGCAAAACATCCCT
ACAGGTGGCAGCCTCCTCCATCCCCGCTGCTGGCTCTGTGCACCTTTTTAGTTTCAGAAA
AGCATGCTGGGGATCAGTCTCCCTGGAAGCCGTACCTGGAGGTTTTGCCGAAGACCTACA
CCTGCCCTGTTTGTTTGGAACCGGAAGTGGTGAATCTCCTTCCCGGACCATTGAAATCAA
AGGCCAGAGAGCAGAGAACCCGCGTGTGGGAGTTCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|55953069|ref|NP_001007263.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|55953069|ref|NP_001007263.1|

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-170, gnl|bosTau2|chr1 (96135586-96135418)
               

               
               1-170, gnl|Hg17|chr21 (36353203-36352984)
               


               
               303-516, gnl|bosTau2|chr1 (96124704-96124491)
               

               
               303-516, gnl|Hg17|chr21 (36340181-36339968)
               

               
               303-516, gnl|Mm7|chr16 (93650340-93650127)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-170, gnl|bosTau2|chr1 (96135586-96135418)
               

               
               1-170, gnl|Hg17|chr21 (36353203-36352984)
               


               
               303-516, gnl|bosTau2|chr1 (96124704-96124491)
               

               
               303-516, gnl|Hg17|chr21 (36340181-36339968)
               

               
               303-516, gnl|Mm7|chr16 (93650340-93650127)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               tes (0.207814)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

	1-170, gnl\|bosTau2\|chr1 (96135586-96135418)
	1-170, gnl\|Hg17\|chr21 (36353203-36352984)

	303-516, gnl\|bosTau2\|chr1 (96124704-96124491)
	303-516, gnl\|Hg17\|chr21 (36340181-36339968)
	303-516, gnl\|Mm7\|chr16 (93650340-93650127)