Ss1.1-Ova1-OVRM10076E11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATGGCGCCGTCCGCGCCGCTCCTGACAGTCCGAGGATCAGAAGGACTGTACCTGGTG AACGGACCACCACATTTTACGGAAAGCACAGTGTTTCCAAGAGAATCTGGGAAAAACTGC AAAGCTTATACCTTTAGTAAGGATGGGACCTTATTTGCCTGGGGCAATGGAGAAAGAATA AATGTCATCAATGTCACTACCAAGGAACTACTGCACTCCTTCGACCTTCCAAAGGCAGTT TGCCTTGAATTCTCACCAAAAAACACTATCCTGGCAACATGGCAGCCTTACACTACTTCT AAAGATGGCGCAGCTGGGATACCCAACCTACAACTTTATGACATGAAAACTGGGACATGT TTGAAGTCTTTCATCCAGAAAAAAATGCAAAATTGGTGTCCATCCTGGTCAGAAGATGAA ACTCTTTGTGCCCGAAATGTTAACAATGAAGTTCACTTCTTTGAAAACAACAATTTTAAC ACAATTGCAAATAAATTGCACTTGAAAAAAATTAATGATTTTGTATTATCACCTGGACCC CAGCCCTACAAGGTGGCTGTCTATGTTCCAGGGAGTAAGGGTGCACCTTCATTTGTTAGA TTGTATCAGTACCCCAACTTTGATGGACCTCATGCAGCTTTAGCCAATAAAAGTTTCTTT AAGGCTGATAAGGTTACAATGCTATGGAATAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATGGCGCCGTCCGCGCCGCTCCTGACAGTCCGAGGATCAGAAGGACTGTACCTGGTG AACGGACCACCACATTTTACGGAAAGCACAGTGTTTCCAAGAGAATCTGGGAAAAACTGC AAAGCTTATACCTTTAGTAAGGATGGGACCTTATTTGCCTGGGGCAATGGAGAAAGAATA AATGTCATCAATGTCACTACCAAGGAACTACTGCACTCCTTCGACCTTCCAAAGGCAGTT TGCCTTGAATTCTCACCAAAAAACACTATCCTGGCAACATGGCAGCCTTACACTACTTCT AAAGATGGCGCAGCTGGGATACCCAACCTACAACTTTATGACATGAAAACTGGGACATGT TTGAAGTCTTTCATCCAGAAAAAAATGCAAAATTGGTGTCCATCCTGGTCAGAAGATGAA ACTCTTTGTGCCCGAAATGTTAACAATGAAGTTCACTTCTTTGAAAACAACAATTTTAAC ACAATTGCAAATAAATTGCACTTGAAAAAAATTAATGATTTTGTATTATCACCTGGACCC CAGCCCTACAAGGTGGCTGTCTATGTTCCAGGGAGTAAGGGTGCACCTTCATTTGTTAGA TTGTATCAGTACCCCAACTTTGATGGACCTCATGCAGCTTTAGCCAATAAAAGTTTCTTT AAGGCTGATAAGGTTACAATGCTATGGAATAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 175-294, gnl|bosTau2|chr1 (74742759-74742878) | |
| 175-294, gnl|canFam2|chr23 (48270822-48270938) | |
| 175-294, gnl|dasNov1|scaffold_16399 (2459-2578) | |
| 175-294, gnl|echTel1|scaffold_268398 (7929-7810) | |
| 175-294, gnl|galGal2|chr9 (23089861-23089750) | |
| 175-294, gnl|hg17|chr10 (44622045-44622163) | |
| 175-294, gnl|Hg17|chr3 (151763025-151763144) | |
| 175-294, gnl|loxAfr1|scaffold_19256 (2566-2685) | |
| 175-294, gnl|Mm7|chr3 (58668298-58668417) | |
| 175-294, gnl|mm7|chr6 (116853303-116853187) | |
| 175-294, gnl|monDom2|scaffold_1 (107236782-107236902) | |
| 175-294, gnl|oryCun1|scaffold_172097 (9295-9409) | |
| 175-294, gnl|panTro1|chr8 (45372385-45372504) | |
| 175-294, gnl|rheMac2|chr9 (44977457-44977575) | |
| 175-294, gnl|rn3|chr2 (147834839-147834954) | |
| 296-397, gnl|bosTau2|chr1 (74744105-74744206) | |
| 296-397, gnl|Hg17|chr3 (151764000-151764101) | |
| 296-397, gnl|Mm7|chr3 (58669812-58669913) | |
| 551-696, gnl|bosTau2|chr1 (74747708-74747853) | |
| 551-696, gnl|canFam2|chr23 (48274233-48274388) | |
| 551-696, gnl|danRer3|chr6 (10961153-10961307) | |
| 551-696, gnl|dasNov1|scaffold_20076 (13451-13296) | |
| 551-696, gnl|echTel1|scaffold_209883 (5891-5741) | |
| 551-696, gnl|fr1|chrUn (292243457-292243607) | |
| 551-696, gnl|galGal2|chr9 (23086468-23086320) | |
| 551-696, gnl|hg17|chr3 (151768385-151768540) | |
| 551-696, gnl|Hg17|chr3 (151768385-151768530) | |
| 551-696, gnl|loxAfr1|scaffold_7698 (35071-34919) | |
| 551-696, gnl|mm7|chr3 (58673998-58674153) | |
| 551-696, gnl|Mm7|chr3 (58673998-58674143) | |
| 551-696, gnl|monDom2|scaffold_28 (22316696-22316850) | |
| 551-696, gnl|oryCun1|scaffold_142832 (17115-16960) | |
| 551-696, gnl|panTro1|chr2 (154962642-154962797) | |
| 551-696, gnl|rheMac2|chr2 (137203571-137203416) | |
| 551-696, gnl|rn3|chr2 (147841331-147841486) | |
| 551-696, gnl|tetNig1|chrUn_random (135643801-135643646) | |
| 551-696, gnl|xenTro1|scaffold_340 (1145651-1145801) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 175-294, gnl|bosTau2|chr1 (74742759-74742878) | |
| 175-294, gnl|canFam2|chr23 (48270822-48270938) | |
| 175-294, gnl|dasNov1|scaffold_16399 (2459-2578) | |
| 175-294, gnl|echTel1|scaffold_268398 (7929-7810) | |
| 175-294, gnl|galGal2|chr9 (23089861-23089750) | |
| 175-294, gnl|hg17|chr10 (44622045-44622163) | |
| 175-294, gnl|Hg17|chr3 (151763025-151763144) | |
| 175-294, gnl|loxAfr1|scaffold_19256 (2566-2685) | |
| 175-294, gnl|Mm7|chr3 (58668298-58668417) | |
| 175-294, gnl|mm7|chr6 (116853303-116853187) | |
| 175-294, gnl|monDom2|scaffold_1 (107236782-107236902) | |
| 175-294, gnl|oryCun1|scaffold_172097 (9295-9409) | |
| 175-294, gnl|panTro1|chr8 (45372385-45372504) | |
| 175-294, gnl|rheMac2|chr9 (44977457-44977575) | |
| 175-294, gnl|rn3|chr2 (147834839-147834954) | |
| 296-397, gnl|bosTau2|chr1 (74744105-74744206) | |
| 296-397, gnl|Hg17|chr3 (151764000-151764101) | |
| 296-397, gnl|Mm7|chr3 (58669812-58669913) | |
| 551-696, gnl|bosTau2|chr1 (74747708-74747853) | |
| 551-696, gnl|canFam2|chr23 (48274233-48274388) | |
| 551-696, gnl|danRer3|chr6 (10961153-10961307) | |
| 551-696, gnl|dasNov1|scaffold_20076 (13451-13296) | |
| 551-696, gnl|echTel1|scaffold_209883 (5891-5741) | |
| 551-696, gnl|fr1|chrUn (292243457-292243607) | |
| 551-696, gnl|galGal2|chr9 (23086468-23086320) | |
| 551-696, gnl|hg17|chr3 (151768385-151768540) | |
| 551-696, gnl|Hg17|chr3 (151768385-151768530) | |
| 551-696, gnl|loxAfr1|scaffold_7698 (35071-34919) | |
| 551-696, gnl|mm7|chr3 (58673998-58674153) | |
| 551-696, gnl|Mm7|chr3 (58673998-58674143) | |
| 551-696, gnl|monDom2|scaffold_28 (22316696-22316850) | |
| 551-696, gnl|oryCun1|scaffold_142832 (17115-16960) | |
| 551-696, gnl|panTro1|chr2 (154962642-154962797) | |
| 551-696, gnl|rheMac2|chr2 (137203571-137203416) | |
| 551-696, gnl|rn3|chr2 (147841331-147841486) | |
| 551-696, gnl|tetNig1|chrUn_random (135643801-135643646) | |
| 551-696, gnl|xenTro1|scaffold_340 (1145651-1145801) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nep (0.183925) | |
| pty (0.142714) | |
| bla (0.124347) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| pty (0.142714) | |
| bla (0.124347) | |
| cty (0.10408) |