Ss1.1-Ova1-OVRM10079H01.5
|
TGCAGGCCGGGTTGGGAGGCCGCGGCTCTGCGTGTCCTCGGCCGTCGGTCAGGGTGAGGC
TGTGACAGCTGCACTTGCTCCCCGCCCCCGCGGAGCCGAGGAGTCTACCATGGCTCAAGA
ATCTCCAAAAAATTCAGCAGCAGAAATTCCAGTGACTAGTAGTGGAGAAGTTGATGACCC
TCATGATCATGGCTTTAACAGGGATTTCAAGCGTTCTTTACCAGCTGGACTTGGTCTCTC
AGAAACCCAAATTACTTCTCATGGCTTTGACGGTACCAAAGAGGGGGTTATTGATGCAGG
AACGTTTCAAGGTTCCCCAGCACCACCACTGCCATCTGTTATGTCTCCTAGCAGGGTGGC
AGCTAGTCGACTGGCTGAGCAAGGAGGTGATTTAATTGCTCCTGCAGGTGGCCAGAGAAC
ACAGACAAAAAGTGGGCCAGTTATTCTAGCAGATGAAGCTAAAAATCCTGCGATGGAAAA
GTTAGAACTCGTTAGAAAATGGAGTCTAAACACCTACAAGTGCACTCGACAGATTATCTC
TGAGAAGCTGGGCCGTGGATCAAGAACTGTGGACCTTGAGCTTGAAGCTCAGATTGATAT
ATTAAGAGATAACAAGAANAAATA------------TAAACTGGCTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TGCAGGCCGGGTTGGGAGGCCGCGGCTCTGCGTGTCCTCGGCCGTCGGTCAGGGTGAGGC
TGTGACAGCTGCACTTGCTCCCCGCCCCCGCGGAGCCGAGGAGTCTACCATGGCTCAAGA
ATCTCCAAAAAATTCAGCAGCAGAAATTCCAGTGACTAGTAGTGGAGAAGTTGATGACCC
TCATGATCATGGCTTTAACAGGGATTTCAAGCGTTCTTTACCAGCTGGACTTGGTCTCTC
AGAAACCCAAATTACTTCTCATGGCTTTGACGGTACCAAAGAGGGGGTTATTGATGCAGG
AACGTTTCAAGGTTCCCCAGCACCACCACTGCCATCTGTTATGTCTCCTAGCAGGGTGGC
AGCTAGTCGACTGGCTGAGCAAGGAGGTGATTTAATTGCTCCTGCAGGTGGCCAGAGAAC
ACAGACAAAAAGTGGGCCAGTTATTCTAGCAGATGAAGCTAAAAATCCTGCGATGGAAAA
GTTAGAACTCGTTAGAAAATGGAGTCTAAACACCTACAAGTGCACTCGACAGATTATCTC
TGAGAAGCTGGGCCGTGGATCAAGAACTGTGGACCTTGAGCTTGAAGCTCAGATTGATAT
ATTAAGAGATAACAAGAANAAATA------------TAAACTGGCTCA
|
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gi|55725396|emb|CAH89562.1| |
Protein identifier
|
gi|55725396|emb|CAH89562.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
99-203, gnl|bosTau2|chr17 (3760172-3760068) |
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99-203, gnl|canFam2|chr15 (53691516-53691645) |
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99-203, gnl|dasNov1|scaffold_45501 (2337-2242) |
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99-203, gnl|echTel1|scaffold_265299 (8835-8924) |
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99-203, gnl|hg17|chr4 (154108363-154108457) |
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99-203, gnl|Hg17|chr4 (154108380-154108484) |
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99-203, gnl|loxAfr1|scaffold_22704 (10834-10739) |
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99-203, gnl|mm7|chr3 (84661323-84661167) |
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99-203, gnl|Mm7|chr3 (84661242-84661138) |
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99-203, gnl|monDom2|scaffold_9 (22883603-22883698) |
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99-203, gnl|panTro1|chr3 (171432693-171432787) |
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99-203, gnl|rheMac2|chr5 (145041127-145041221) |
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99-203, gnl|rn3|chr2 (176276585-176276470) |
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99-203, gnl|tetNig1|chr18 (8083062-8083156) |
| |
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405-520, gnl|bosTau2|chr17 (2854874-2854759) |
|
405-520, gnl|Hg17|chr4 (154151206-154151321) |
|
405-520, gnl|Mm7|chr3 (84641006-84640891) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
99-203, gnl|bosTau2|chr17 (3760172-3760068) |
|
99-203, gnl|canFam2|chr15 (53691516-53691645) |
|
99-203, gnl|dasNov1|scaffold_45501 (2337-2242) |
|
99-203, gnl|echTel1|scaffold_265299 (8835-8924) |
|
99-203, gnl|hg17|chr4 (154108363-154108457) |
|
99-203, gnl|Hg17|chr4 (154108380-154108484) |
|
99-203, gnl|loxAfr1|scaffold_22704 (10834-10739) |
|
99-203, gnl|mm7|chr3 (84661323-84661167) |
|
99-203, gnl|Mm7|chr3 (84661242-84661138) |
|
99-203, gnl|monDom2|scaffold_9 (22883603-22883698) |
|
99-203, gnl|panTro1|chr3 (171432693-171432787) |
|
99-203, gnl|rheMac2|chr5 (145041127-145041221) |
|
99-203, gnl|rn3|chr2 (176276585-176276470) |
|
99-203, gnl|tetNig1|chr18 (8083062-8083156) |
| |
|
405-520, gnl|bosTau2|chr17 (2854874-2854759) |
|
405-520, gnl|Hg17|chr4 (154151206-154151321) |
|
405-520, gnl|Mm7|chr3 (84641006-84640891) |
