Ss1.1-Ova1-OVRM10081H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTAGCAGCGGCTCTCGGTGCAGCGGGGAAAGGGCGAAGCGGCCTGCGCCCACGGAGCGC ACGACACTGCCCAGAACGCACCGCCACCCTTGCCCCTTCAGCCGCCCCCCGCTTTTTCTT CTCTCCCCTCACGGTCTCAAGATGCCCTCGGCCACCAGCCACAGCGGAAGCGGCAGCAAG TCGTCCGGACCGCCACCCCCGTCGGGTTCCTCCGGGAGTGAGGCGGCGGCGGGAGCCGGG GCCGCCGCGCCGGCTTCTCAGCACCCCGCGACCGGCACCGGCGCTGTCCAGACCGAGGCC ATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGC AAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAACTG GATGCTGTATCTAAGTACCAGGAAGTTACAAATAACTTGGAGTTTGCAAAAGAATTACAA AGGAGTTTCATGGCATTAAGCCAAGATATTCAGAAAACAATAAAGAAGACAGCACGTCGG GAGCAGCTCATGAGAGAAGAAGCTGAACAGAAACGTTTAAAAACTGTACTTGAGCTACAG TATGTTTTGGACAAATTGGGAGATGATGAAGTGCGGACTGACTTGAAGCAAGGTTTGAAT GGAGTGCCAATAGTGTGTGTGTGTGAATTGTCATTGTTGGATGAGTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTAGCAGCGGCTCTCGGTGCAGCGGGGAAAGGGCGAAGCGGCCTGCGCCCACGGAGCGC ACGACACTGCCCAGAACGCACCGCCACCCTTGCCCCTTCAGCCGCCCCCCGCTTTTTCTT CTCTCCCCTCACGGTCTCAAGATGCCCTCGGCCACCAGCCACAGCGGAAGCGGCAGCAAG TCGTCCGGACCGCCACCCCCGTCGGGTTCCTCCGGGAGTGAGGCGGCGGCGGGAGCCGGG GCCGCCGCGCCGGCTTCTCAGCACCCCGCGACCGGCACCGGCGCTGTCCAGACCGAGGCC ATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGC AAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAACTG GATGCTGTATCTAAGTACCAGGAAGTTACAAATAACTTGGAGTTTGCAAAAGAATTACAA AGGAGTTTCATGGCATTAAGCCAAGATATTCAGAAAACAATAAAGAAGACAGCACGTCGG GAGCAGCTCATGAGAGAAGAAGCTGAACAGAAACGTTTAAAAACTGTACTTGAGCTACAG TATGTTTTGGACAAATTGGGAGATGATGAAGTGCGGACTGACTTGAAGCAAGGTTTGAAT GGAGTGCCAATAGTGTGTGTGTGTGAATTGTCATTGTTGGATGAGTTC |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 1-107, gnl|bosTau2|chr15 (38914387-38914493) | |
| 1-107, gnl|dasNov1|scaffold_14299 (38912-38512) | |
| 1-107, gnl|hg17|chr11 (34029839-34030232) | |
| 1-107, gnl|Hg17|chr11 (34029855-34029960) | |
| 1-107, gnl|loxAfr1|scaffold_79712 (7386-6982) | |
| 1-107, gnl|mm7|chr2 (103648405-103648009) | |
| 1-107, gnl|Mm7|chr2 (103648388-103648283) | |
| 1-107, gnl|monDom2|scaffold_10 (80283971-80284320) | |
| 1-107, gnl|panTro1|chr9 (34412264-34412658) | |
| 1-107, gnl|rheMac2|chr14 (37770267-37769878) | |
| 1-107, gnl|rn3|chr3 (88989592-88989197) | |
| 138-358, gnl|bosTau2|chr15 (38914861-38915075) | |
| 138-358, gnl|canFam2|chr18 (36753283-36753043) | |
| 138-358, gnl|dasNov1|scaffold_14299 (38195-37979) | |
| 138-358, gnl|hg17|chr11 (34030542-34030758) | |
| 138-358, gnl|Hg17|chr11 (34030541-34030760) | |
| 138-358, gnl|loxAfr1|scaffold_48794 (1188-978) | |
| 138-358, gnl|mm7|chr2 (103647731-103647521) | |
| 138-358, gnl|Mm7|chr2 (103647730-103647517) | |
| 138-358, gnl|monDom2|scaffold_10 (80284690-80284939) | |
| 138-358, gnl|oryCun1|scaffold_198377 (9952-10169) | |
| 138-358, gnl|panTro1|chr9 (34412968-34413184) | |
| 138-358, gnl|rn3|chr3 (88988927-88988717) | |
| 508-708, gnl|bosTau2|chr15 (38930432-38930632) | |
| 508-708, gnl|canFam2|chr18 (36735970-36735727) | |
| 508-708, gnl|danRer3|chr7 (17709745-17709986) | |
| 508-708, gnl|dasNov1|scaffold_14299 (37826-37590) | |
| 508-708, gnl|echTel1|scaffold_183425 (16497-16254) | |
| 508-708, gnl|fr1|chrUn (37941936-37942177) | |
| 508-708, gnl|galGal2|chrUn (132905880-132905637) | |
| 508-708, gnl|hg17|chr11 (34054358-34054601) | |
| 508-708, gnl|Hg17|chr11 (34054359-34054559) | |
| 508-708, gnl|loxAfr1|scaffold_1652 (87262-87505) | |
| 508-708, gnl|mm7|chr2 (103630361-103630118) | |
| 508-708, gnl|Mm7|chr2 (103630358-103630158) | |
| 508-708, gnl|monDom2|scaffold_10 (80311135-80311378) | |
| 508-708, gnl|oryCun1|scaffold_179948 (23165-23408) | |
| 508-708, gnl|panTro1|chr9 (34439076-34439319) | |
| 508-708, gnl|rheMac2|chr14 (37744320-37744077) | |
| 508-708, gnl|rn3|chr3 (88970415-88970172) | |
| 508-708, gnl|tetNig1|chr13 (10484644-10484885) | |
| 508-708, gnl|xenTro1|scaffold_922 (356118-355875) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-107, gnl|bosTau2|chr15 (38914387-38914493) | |
| 1-107, gnl|dasNov1|scaffold_14299 (38912-38512) | |
| 1-107, gnl|hg17|chr11 (34029839-34030232) | |
| 1-107, gnl|Hg17|chr11 (34029855-34029960) | |
| 1-107, gnl|loxAfr1|scaffold_79712 (7386-6982) | |
| 1-107, gnl|mm7|chr2 (103648405-103648009) | |
| 1-107, gnl|Mm7|chr2 (103648388-103648283) | |
| 1-107, gnl|monDom2|scaffold_10 (80283971-80284320) | |
| 1-107, gnl|panTro1|chr9 (34412264-34412658) | |
| 1-107, gnl|rheMac2|chr14 (37770267-37769878) | |
| 1-107, gnl|rn3|chr3 (88989592-88989197) | |
| 138-358, gnl|bosTau2|chr15 (38914861-38915075) | |
| 138-358, gnl|canFam2|chr18 (36753283-36753043) | |
| 138-358, gnl|dasNov1|scaffold_14299 (38195-37979) | |
| 138-358, gnl|hg17|chr11 (34030542-34030758) | |
| 138-358, gnl|Hg17|chr11 (34030541-34030760) | |
| 138-358, gnl|loxAfr1|scaffold_48794 (1188-978) | |
| 138-358, gnl|mm7|chr2 (103647731-103647521) | |
| 138-358, gnl|Mm7|chr2 (103647730-103647517) | |
| 138-358, gnl|monDom2|scaffold_10 (80284690-80284939) | |
| 138-358, gnl|oryCun1|scaffold_198377 (9952-10169) | |
| 138-358, gnl|panTro1|chr9 (34412968-34413184) | |
| 138-358, gnl|rn3|chr3 (88988927-88988717) | |
| 508-708, gnl|bosTau2|chr15 (38930432-38930632) | |
| 508-708, gnl|canFam2|chr18 (36735970-36735727) | |
| 508-708, gnl|danRer3|chr7 (17709745-17709986) | |
| 508-708, gnl|dasNov1|scaffold_14299 (37826-37590) | |
| 508-708, gnl|echTel1|scaffold_183425 (16497-16254) | |
| 508-708, gnl|fr1|chrUn (37941936-37942177) | |
| 508-708, gnl|galGal2|chrUn (132905880-132905637) | |
| 508-708, gnl|hg17|chr11 (34054358-34054601) | |
| 508-708, gnl|Hg17|chr11 (34054359-34054559) | |
| 508-708, gnl|loxAfr1|scaffold_1652 (87262-87505) | |
| 508-708, gnl|mm7|chr2 (103630361-103630118) | |
| 508-708, gnl|Mm7|chr2 (103630358-103630158) | |
| 508-708, gnl|monDom2|scaffold_10 (80311135-80311378) | |
| 508-708, gnl|oryCun1|scaffold_179948 (23165-23408) | |
| 508-708, gnl|panTro1|chr9 (34439076-34439319) | |
| 508-708, gnl|rheMac2|chr14 (37744320-37744077) | |
| 508-708, gnl|rn3|chr3 (88970415-88970172) | |
| 508-708, gnl|tetNig1|chr13 (10484644-10484885) | |
| 508-708, gnl|xenTro1|scaffold_922 (356118-355875) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| eep (0.122564) |