Non-Coding RNA Search

Ss1.1-Ova1-OVRM10082C05.5

Sequence:


               
               AGGTACTGAAGCAAATTAGAGGCTGGGTTGAAACAGAGTTGCTCGCCGGCCCTCGGCTCT
CCCCTCTTGGCCTCTCCCCTGCCAGCCCGCAGCCCGGATTTCGTCCCTGGGGCCTCCCTA
GCGTAACCCAGTCGGCTCCACGGCTCCACGGCTCCACGCCGGAGTACTCACGCTGCTGTC
TCCCAGCGCCTCCGCGCTGCCGATGTCCAAAGACCTTTGAAATTTGACCTCCTCCCTCCT
CAATGTTTGAGTAACTTTTAAGTTTTCCTTTCTACCAACAAGTCCTCTGGTTATTCTGCA
AAATCACGACGCACGAACGCCGTATACCCTGCGGTGGCTGGACTGTACGTTCTGTTATGC
TTGATGAGATCTTTGTGTACCTGCAGTCCTTTTATACCCGGTCAAATCGCGGCTGGCAGA
TTGAGAAGTCATTGGAGAGGGCATAATAAATATGTTCCAATAGTAATTCTCAAAGATGAG
GTCCTTCCCTGGATGAGATCTGGTACAGAAATTCTCTGGTGCCCTGTTTTGGCACCTGGC
TCCAGAAACGCTGTCTTCTAGTAAATCTGACGTAAAGGTAGGACACGTCTATGCCCTGAG
TTAGAGGAATTCTAAACTGGCAGTTAATTTTTGGTCCCTGTTTTGTTTTTGTTTTTGTTC
TTTTCCCTTGGCTTTTCTTTCTGGAGTCCTAATAGTTTTATCTCTTCTGCAGATATGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTACTGAAGCAAATTAGAGGCTGGGTTGAAACAGAGTTGCTCGCCGGCCCTCGGCTCT
CCCCTCTTGGCCTCTCCCCTGCCAGCCCGCAGCCCGGATTTCGTCCCTGGGGCCTCCCTA
GCGTAACCCAGTCGGCTCCACGGCTCCACGGCTCCACGCCGGAGTACTCACGCTGCTGTC
TCCCAGCGCCTCCGCGCTGCCGATGTCCAAAGACCTTTGAAATTTGACCTCCTCCCTCCT
CAATGTTTGAGTAACTTTTAAGTTTTCCTTTCTACCAACAAGTCCTCTGGTTATTCTGCA
AAATCACGACGCACGAACGCCGTATACCCTGCGGTGGCTGGACTGTACGTTCTGTTATGC
TTGATGAGATCTTTGTGTACCTGCAGTCCTTTTATACCCGGTCAAATCGCGGCTGGCAGA
TTGAGAAGTCATTGGAGAGGGCATAATAAATATGTTCCAATAGTAATTCTCAAAGATGAG
GTCCTTCCCTGGATGAGATCTGGTACAGAAATTCTCTGGTGCCCTGTTTTGGCACCTGGC
TCCAGAAACGCTGTCTTCTAGTAAATCTGACGTAAAGGTAGGACACGTCTATGCCCTGAG
TTAGAGGAATTCTAAACTGGCAGTTAATTTTTGGTCCCTGTTTTGTTTTTGTTTTTGTTC
TTTTCCCTTGGCTTTTCTTTCTGGAGTCCTAATAGTTTTATCTCTTCTGCAGATATGCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-578, gnl|bosTau2|chr11 (52106218-52105657)
               

               
               1-578, gnl|Hg17|chr2 (27346985-27347583)
               

               
               1-578, gnl|Mm7|chr5 (30081271-30081883)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-578, gnl|bosTau2|chr11 (52106218-52105657)
               

               
               1-578, gnl|Hg17|chr2 (27346985-27347583)
               

               
               1-578, gnl|Mm7|chr5 (30081271-30081883)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	1-578, gnl\|bosTau2\|chr11 (52106218-52105657)
	1-578, gnl\|Hg17\|chr2 (27346985-27347583)
	1-578, gnl\|Mm7\|chr5 (30081271-30081883)