Non-Coding RNA Search

Ss1.1-Ova1-OVRM10088D07.5

Sequence:


               
               AAAGAAGAGATGCCACTTGGCGGCCATGGCAGCTGTAGTACTGGTGGCTCCGGGTCAAGG
CCCAGCAGAGTGGAGTAACATGGGTAGCACTGGGTATAGGGCAGAGACAGCTTTGTATCA
GCTTCCCTGCTGAGCCCCTACGACCAATCGTTAGAGACCTGCAGGACTCCTTTCCTCATC
CTAGACTCGGAGAGGAGTTTGCTGGGATTGGTGGGCTGGTCCCAGACCTGGAGGAATCAC
CGGCGGGGCTGCTCCAGGGAGATAGGGGCGCCCGGAGAACAAACATCTTCGCTTGGATTT
TTCCTTTTGTTGCTGCCGCCCGGAACGTTGTGGAGGAAGTAGGCCTGTTATGCTACCCTT
ATAACAATGATTGAATAACTCGCTCATTCGCATATTTTCCCCCTGGACTTTTCTCATCTG
TTAACCCACGAGAATCCAGTGACTGATATCTGAAAACTTAGGGGCTGCGACCCAAGACTG
CTCAAAGTTCTCTCTGGTGCTAGTATCAACAAAAAGGGAGTGTTTCCAGGTACCTTCAAG
AGAACAGTGCCTCGTGAACATATCTGCTGGTGGGGAGGACAAAAGAACTGGGAAGTCTAC
TTGTTCTGCTGAAACAACCACACGCGTTTAAGAACCTAAGTACCCTTTGAGACCACCGAA
AATTTGTACTCTGGTGGTGGTGAGTGAATAAAGGAGGGCAGAATGGATGATTTCATCTCT
ATTAGTCTGCTGTCTCTGGCTATGTTGGTGGGATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAAGAGATGCCACTTGGCGGCCATGGCAGCTGTAGTACTGGTGGCTCCGGGTCAAGG
CCCAGCAGAGTGGAGTAACATGGGTAGCACTGGGTATAGGGCAGAGACAGCTTTGTATCA
GCTTCCCTGCTGAGCCCCTACGACCAATCGTTAGAGACCTGCAGGACTCCTTTCCTCATC
CTAGACTCGGAGAGGAGTTTGCTGGGATTGGTGGGCTGGTCCCAGACCTGGAGGAATCAC
CGGCGGGGCTGCTCCAGGGAGATAGGGGCGCCCGGAGAACAAACATCTTCGCTTGGATTT
TTCCTTTTGTTGCTGCCGCCCGGAACGTTGTGGAGGAAGTAGGCCTGTTATGCTACCCTT
ATAACAATGATTGAATAACTCGCTCATTCGCATATTTTCCCCCTGGACTTTTCTCATCTG
TTAACCCACGAGAATCCAGTGACTGATATCTGAAAACTTAGGGGCTGCGACCCAAGACTG
CTCAAAGTTCTCTCTGGTGCTAGTATCAACAAAAAGGGAGTGTTTCCAGGTACCTTCAAG
AGAACAGTGCCTCGTGAACATATCTGCTGGTGGGGAGGACAAAAGAACTGGGAAGTCTAC
TTGTTCTGCTGAAACAACCACACGCGTTTAAGAACCTAAGTACCCTTTGAGACCACCGAA
AATTTGTACTCTGGTGGTGGTGAGTGAATAAAGGAGGGCAGAATGGATGATTTCATCTCT
ATTAGTCTGCTGTCTCTGGCTATGTTGGTGGGATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-756, gnl|bosTau2|chr10 (55704523-55705270)
               

               
               1-756, gnl|Hg17|chr14 (68935159-68935893)
               

               
               1-756, gnl|Mm7|chr12 (78607012-78607720)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-756, gnl|bosTau2|chr10 (55704523-55705270)
               

               
               1-756, gnl|Hg17|chr14 (68935159-68935893)
               

               
               1-756, gnl|Mm7|chr12 (78607012-78607720)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	1-756, gnl\|bosTau2\|chr10 (55704523-55705270)
	1-756, gnl\|Hg17\|chr14 (68935159-68935893)
	1-756, gnl\|Mm7\|chr12 (78607012-78607720)