Ss1.1-Ova1-OVRM10088D11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGACATGCTGCTGCTCAAGAAACAGACGGAGGACATCAGCAGCGTCTACGAGATCCGGG AGAAGCTCGGCTCGGGCGCTTTCTCAGAGGTGGTGCTGGCGCAGGAGCGGGGCTCTTCGC ACCTTGTCGCCCTCAAGTGCATCCCCAAGAAGGCCCTTCGAGGCAAGGAGGCCCTGGTGG AGAACGAGATCGCGGTGCTCCGCAGGGTCAGCCACCCCAACATCGTGGCTCTGGAGGATG TCCACGAGAGCCCTTCCCACCTCTACCTGGCCATGGAGCTGGTGACCGGGGGCGAGCTGT TTGATCGCATCATGGAGCGCGGCTCCTACACAGAGAAGGACGCCAGCCACCTGGTGGGCC AGGTCCTCGGCGCTGTCTCCTACCTGCACAGCCTGGGCATCGTGCACCGAGACCTCAAGC CTGAAAACCTCCTCTATGCCACGCCCTTCGAGGACTCCAAGATCATGGTCTCTGACTTTG GCCTCTCCAAAATCCAGGCTGGCAACATGCTGGGCACCGCCTGTGGGACCCCGGGATACG TGGCCCCGGAGCTCTTGGAGCAGAAACCCTACGGGAAGGCCGTAGACGTGTGGGCCCTGG GTGTCATCTCCTACATCCTGCTGTGTGGGTACCCCCCCTTCTACGACGAGAGCGATCCTG AGCTCTTCAGCCAGATCCTGAGGGCCAGCTACGAGTTCGACTCTCCCTTTGGGGATGACA TCTCCGAATCAGCCAAAGACTTCATCCGGCACCTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGACATGCTGCTGCTCAAGAAACAGACGGAGGACATCAGCAGCGTCTACGAGATCCGGG AGAAGCTCGGCTCGGGCGCTTTCTCAGAGGTGGTGCTGGCGCAGGAGCGGGGCTCTTCGC ACCTTGTCGCCCTCAAGTGCATCCCCAAGAAGGCCCTTCGAGGCAAGGAGGCCCTGGTGG AGAACGAGATCGCGGTGCTCCGCAGGGTCAGCCACCCCAACATCGTGGCTCTGGAGGATG TCCACGAGAGCCCTTCCCACCTCTACCTGGCCATGGAGCTGGTGACCGGGGGCGAGCTGT TTGATCGCATCATGGAGCGCGGCTCCTACACAGAGAAGGACGCCAGCCACCTGGTGGGCC AGGTCCTCGGCGCTGTCTCCTACCTGCACAGCCTGGGCATCGTGCACCGAGACCTCAAGC CTGAAAACCTCCTCTATGCCACGCCCTTCGAGGACTCCAAGATCATGGTCTCTGACTTTG GCCTCTCCAAAATCCAGGCTGGCAACATGCTGGGCACCGCCTGTGGGACCCCGGGATACG TGGCCCCGGAGCTCTTGGAGCAGAAACCCTACGGGAAGGCCGTAGACGTGTGGGCCCTGG GTGTCATCTCCTACATCCTGCTGTGTGGGTACCCCCCCTTCTACGACGAGAGCGATCCTG AGCTCTTCAGCCAGATCCTGAGGGCCAGCTACGAGTTCGACTCTCCCTTTGGGGATGACA TCTCCGAATCAGCCAAAGACTTCATCCGGCACCTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 74-219, gnl|bosTau2|chrX (13606832-13606978) | |
| 74-219, gnl|Hg17|chrX (152458999-152458841) | |
| 74-219, gnl|Mm7|chrX (69045468-69045318) | |
| 281-419, gnl|bosTau2|chrX (13607340-13607478) | |
| 281-419, gnl|canFam2|chrX (124534341-124534489) | |
| 281-419, gnl|danRer3|chr8 (2950933-2951077) | |
| 281-419, gnl|dasNov1|scaffold_3445 (88755-88880) | |
| 281-419, gnl|echTel1|scaffold_311188 (33616-33768) | |
| 281-419, gnl|fr1|chrUn (135445133-135445281) | |
| 281-419, gnl|galGal2|chr26 (1689113-1688963) | |
| 281-419, gnl|hg17|chrX (152458180-152458328) | |
| 281-419, gnl|Hg17|chrX (152458320-152458182) | |
| 281-419, gnl|loxAfr1|scaffold_107209 (5797-5945) | |
| 281-419, gnl|mm7|chrX (69044666-69044814) | |
| 281-419, gnl|Mm7|chrX (69044806-69044668) | |
| 281-419, gnl|monDom2|scaffold_178 (1116558-1116706) | |
| 281-419, gnl|oryCun1|scaffold_194152 (136010-136158) | |
| 281-419, gnl|panTro1|chrX (157743441-157743589) | |
| 281-419, gnl|rheMac2|chrX (151782204-151782352) | |
| 281-419, gnl|rn3|chrX (159630991-159631139) | |
| 281-419, gnl|tetNig1|chr13 (9877620-9877472) | |
| 281-419, gnl|xenTro1|scaffold_82 (1171334-1171481) | |
| 620-732, gnl|bosTau2|chrX (13608066-13608178) | |
| 620-732, gnl|canFam2|chrX (124533624-124533752) | |
| 620-732, gnl|danRer3|chr8 (2948382-2948499) | |
| 620-732, gnl|dasNov1|scaffold_46722 (44907-45027) | |
| 620-732, gnl|echTel1|scaffold_311188 (31519-31640) | |
| 620-732, gnl|fr1|chrUn (135443810-135443933) | |
| 620-732, gnl|galGal2|chr26 (1690580-1690452) | |
| 620-732, gnl|hg17|chrX (152457376-152457504) | |
| 620-732, gnl|Hg17|chrX (152457492-152457380) | |
| 620-732, gnl|loxAfr1|scaffold_107209 (5070-5198) | |
| 620-732, gnl|mm7|chrX (69043876-69044004) | |
| 620-732, gnl|Mm7|chrX (69043992-69043880) | |
| 620-732, gnl|monDom2|scaffold_178 (1115026-1115147) | |
| 620-732, gnl|oryCun1|scaffold_194152 (135416-135544) | |
| 620-732, gnl|panTro1|chrX (157742637-157742765) | |
| 620-732, gnl|rheMac2|chrX (151781413-151781541) | |
| 620-732, gnl|rn3|chrX (159630198-159630326) | |
| 620-732, gnl|tetNig1|chr13 (9878682-9878559) | |
| 620-732, gnl|xenTro1|scaffold_82 (1166094-1166214) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 74-219, gnl|bosTau2|chrX (13606832-13606978) | |
| 74-219, gnl|Hg17|chrX (152458999-152458841) | |
| 74-219, gnl|Mm7|chrX (69045468-69045318) | |
| 281-419, gnl|bosTau2|chrX (13607340-13607478) | |
| 281-419, gnl|canFam2|chrX (124534341-124534489) | |
| 281-419, gnl|danRer3|chr8 (2950933-2951077) | |
| 281-419, gnl|dasNov1|scaffold_3445 (88755-88880) | |
| 281-419, gnl|echTel1|scaffold_311188 (33616-33768) | |
| 281-419, gnl|fr1|chrUn (135445133-135445281) | |
| 281-419, gnl|galGal2|chr26 (1689113-1688963) | |
| 281-419, gnl|hg17|chrX (152458180-152458328) | |
| 281-419, gnl|Hg17|chrX (152458320-152458182) | |
| 281-419, gnl|loxAfr1|scaffold_107209 (5797-5945) | |
| 281-419, gnl|mm7|chrX (69044666-69044814) | |
| 281-419, gnl|Mm7|chrX (69044806-69044668) | |
| 281-419, gnl|monDom2|scaffold_178 (1116558-1116706) | |
| 281-419, gnl|oryCun1|scaffold_194152 (136010-136158) | |
| 281-419, gnl|panTro1|chrX (157743441-157743589) | |
| 281-419, gnl|rheMac2|chrX (151782204-151782352) | |
| 281-419, gnl|rn3|chrX (159630991-159631139) | |
| 281-419, gnl|tetNig1|chr13 (9877620-9877472) | |
| 281-419, gnl|xenTro1|scaffold_82 (1171334-1171481) | |
| 620-732, gnl|bosTau2|chrX (13608066-13608178) | |
| 620-732, gnl|canFam2|chrX (124533624-124533752) | |
| 620-732, gnl|danRer3|chr8 (2948382-2948499) | |
| 620-732, gnl|dasNov1|scaffold_46722 (44907-45027) | |
| 620-732, gnl|echTel1|scaffold_311188 (31519-31640) | |
| 620-732, gnl|fr1|chrUn (135443810-135443933) | |
| 620-732, gnl|galGal2|chr26 (1690580-1690452) | |
| 620-732, gnl|hg17|chrX (152457376-152457504) | |
| 620-732, gnl|Hg17|chrX (152457492-152457380) | |
| 620-732, gnl|loxAfr1|scaffold_107209 (5070-5198) | |
| 620-732, gnl|mm7|chrX (69043876-69044004) | |
| 620-732, gnl|Mm7|chrX (69043992-69043880) | |
| 620-732, gnl|monDom2|scaffold_178 (1115026-1115147) | |
| 620-732, gnl|oryCun1|scaffold_194152 (135416-135544) | |
| 620-732, gnl|panTro1|chrX (157742637-157742765) | |
| 620-732, gnl|rheMac2|chrX (151781413-151781541) | |
| 620-732, gnl|rn3|chrX (159630198-159630326) | |
| 620-732, gnl|tetNig1|chr13 (9878682-9878559) | |
| 620-732, gnl|xenTro1|scaffold_82 (1166094-1166214) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| hyp (0.142837) |