Ss1.1-Ova1-OVRM10094B12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGACCGGAGGGGATGAGGAGGAAGAGTGGCTCTATGGCGATGAAAATGAAGTTGAAAGG CCAGAAGAAGAAAATGCCAGTGCTAATCCTCCATCTGGAATTGAAGATGAAACTGCTGAA AATGGTGTACCTAAACCGAAAGTGACTGAGACTGAAGACGACAGTGACAGCGACAGTGAT GATGATGAGGATGATGTTCATGTCACTATAGGAGACATTAAAACGGGTGCACCACAGTAT GGGAGTTACGGCACAGCACCTGTAAATCTTAACATCAAGACAGGAGGAAGAGTTTATGGG ACTACAGTAGGAACGAAAGTCAAAGGAGTGGATCTTGACGCACCTGGAAGCATTAATGGA GTTCCACTCTTGGAGGTTGATTTGGATTCTTTTGAAGATAAACCATGGCGAAAACCTGGT GCTGATCTTTCTGATTATTTTAATTATGGGTTTAATGAAGATACCTGGAAAGCTTACTGT GAAAAACAAAAGAGGATACGAATGGGACTTGAAGTTATACCAGTTACCTCTACTACTAAT AAAATTACGGCCGAAGACTGTACTATGGAAGTTACACCAGGTGCAGAGATCCAAGATGGC AGATTCAATCTTTTTAAGGTACAGCAGGGAAGAACTGGAAATTCAGAGAAGGAAGCAGCA CTTCCATCTACAAAAGCTGAGTTTACTTCTCCTCCTTCCTTGTTCAAGACTGGCCTCCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGACCGGAGGGGATGAGGAGGAAGAGTGGCTCTATGGCGATGAAAATGAAGTTGAAAGG CCAGAAGAAGAAAATGCCAGTGCTAATCCTCCATCTGGAATTGAAGATGAAACTGCTGAA AATGGTGTACCTAAACCGAAAGTGACTGAGACTGAAGACGACAGTGACAGCGACAGTGAT GATGATGAGGATGATGTTCATGTCACTATAGGAGACATTAAAACGGGTGCACCACAGTAT GGGAGTTACGGCACAGCACCTGTAAATCTTAACATCAAGACAGGAGGAAGAGTTTATGGG ACTACAGTAGGAACGAAAGTCAAAGGAGTGGATCTTGACGCACCTGGAAGCATTAATGGA GTTCCACTCTTGGAGGTTGATTTGGATTCTTTTGAAGATAAACCATGGCGAAAACCTGGT GCTGATCTTTCTGATTATTTTAATTATGGGTTTAATGAAGATACCTGGAAAGCTTACTGT GAAAAACAAAAGAGGATACGAATGGGACTTGAAGTTATACCAGTTACCTCTACTACTAAT AAAATTACGGCCGAAGACTGTACTATGGAAGTTACACCAGGTGCAGAGATCCAAGATGGC AGATTCAATCTTTTTAAGGTACAGCAGGGAAGAACTGGAAATTCAGAGAAGGAAGCAGCA CTTCCATCTACAAAAGCTGAGTTTACTTCTCCTCCTTCCTTGTTCAAGACTGGCCTCCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 138-243, gnl|bosTau2|chr6 (37518915-37519020) | |
| 138-243, gnl|Hg17|chr4 (54090867-54090972) | |
| 138-243, gnl|Mm7|chr5 (73960703-73960808) | |
| 418-550, gnl|bosTau2|chr6 (37524959-37525091) | |
| 418-550, gnl|canFam2|chr13 (48959713-48959882) | |
| 418-550, gnl|danRer3|chrNA (158008823-158008984) | |
| 418-550, gnl|dasNov1|scaffold_22839 (42401-42232) | |
| 418-550, gnl|echTel1|scaffold_164649 (1397-1564) | |
| 418-550, gnl|fr1|chrUn (312521350-312521198) | |
| 418-550, gnl|galGal2|chr4 (66228029-66227853) | |
| 418-550, gnl|hg17|chr4 (54098073-54098242) | |
| 418-550, gnl|Hg17|chr4 (54098103-54098235) | |
| 418-550, gnl|loxAfr1|scaffold_4253 (61989-61820) | |
| 418-550, gnl|mm7|chr5 (73965359-73965528) | |
| 418-550, gnl|Mm7|chr5 (73965389-73965521) | |
| 418-550, gnl|monDom2|scaffold_26 (17005353-17005508) | |
| 418-550, gnl|panTro1|chr3 (92569642-92569473) | |
| 418-550, gnl|rheMac2|chr5 (75993458-75993289) | |
| 418-550, gnl|rn3|chr14 (36040379-36040210) | |
| 418-550, gnl|tetNig1|chr18 (3420394-3420560) | |
| 418-550, gnl|xenTro1|scaffold_248 (514594-514761) | |
| 611-720, gnl|bosTau2|chr6 (37532451-37532560) | |
| 611-720, gnl|canFam2|chr13 (48967884-48968008) | |
| 611-720, gnl|danRer3|chrNA (158010366-158010491) | |
| 611-720, gnl|dasNov1|scaffold_103451 (7492-7368) | |
| 611-720, gnl|echTel1|scaffold_310476 (77759-77635) | |
| 611-720, gnl|galGal2|chr4 (66225295-66225171) | |
| 611-720, gnl|hg17|chr4 (54106815-54106939) | |
| 611-720, gnl|Hg17|chr4 (54106816-54106926) | |
| 611-720, gnl|loxAfr1|scaffold_4253 (51650-51526) | |
| 611-720, gnl|mm7|chr5 (73975735-73975859) | |
| 611-720, gnl|Mm7|chr5 (73975737-73975846) | |
| 611-720, gnl|monDom2|scaffold_26 (17014059-17014183) | |
| 611-720, gnl|oryCun1|scaffold_201671 (86561-86438) | |
| 611-720, gnl|panTro1|chr3 (92560777-92560653) | |
| 611-720, gnl|rheMac2|chr5 (75984713-75984589) | |
| 611-720, gnl|rn3|chr14 (36032254-36032130) | |
| 611-720, gnl|tetNig1|chr18 (3420707-3420834) | |
| 611-720, gnl|xenTro1|scaffold_248 (517703-517827) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 138-243, gnl|bosTau2|chr6 (37518915-37519020) | |
| 138-243, gnl|Hg17|chr4 (54090867-54090972) | |
| 138-243, gnl|Mm7|chr5 (73960703-73960808) | |
| 418-550, gnl|bosTau2|chr6 (37524959-37525091) | |
| 418-550, gnl|canFam2|chr13 (48959713-48959882) | |
| 418-550, gnl|danRer3|chrNA (158008823-158008984) | |
| 418-550, gnl|dasNov1|scaffold_22839 (42401-42232) | |
| 418-550, gnl|echTel1|scaffold_164649 (1397-1564) | |
| 418-550, gnl|fr1|chrUn (312521350-312521198) | |
| 418-550, gnl|galGal2|chr4 (66228029-66227853) | |
| 418-550, gnl|hg17|chr4 (54098073-54098242) | |
| 418-550, gnl|Hg17|chr4 (54098103-54098235) | |
| 418-550, gnl|loxAfr1|scaffold_4253 (61989-61820) | |
| 418-550, gnl|mm7|chr5 (73965359-73965528) | |
| 418-550, gnl|Mm7|chr5 (73965389-73965521) | |
| 418-550, gnl|monDom2|scaffold_26 (17005353-17005508) | |
| 418-550, gnl|panTro1|chr3 (92569642-92569473) | |
| 418-550, gnl|rheMac2|chr5 (75993458-75993289) | |
| 418-550, gnl|rn3|chr14 (36040379-36040210) | |
| 418-550, gnl|tetNig1|chr18 (3420394-3420560) | |
| 418-550, gnl|xenTro1|scaffold_248 (514594-514761) | |
| 611-720, gnl|bosTau2|chr6 (37532451-37532560) | |
| 611-720, gnl|canFam2|chr13 (48967884-48968008) | |
| 611-720, gnl|danRer3|chrNA (158010366-158010491) | |
| 611-720, gnl|dasNov1|scaffold_103451 (7492-7368) | |
| 611-720, gnl|echTel1|scaffold_310476 (77759-77635) | |
| 611-720, gnl|galGal2|chr4 (66225295-66225171) | |
| 611-720, gnl|hg17|chr4 (54106815-54106939) | |
| 611-720, gnl|Hg17|chr4 (54106816-54106926) | |
| 611-720, gnl|loxAfr1|scaffold_4253 (51650-51526) | |
| 611-720, gnl|mm7|chr5 (73975735-73975859) | |
| 611-720, gnl|Mm7|chr5 (73975737-73975846) | |
| 611-720, gnl|monDom2|scaffold_26 (17014059-17014183) | |
| 611-720, gnl|oryCun1|scaffold_201671 (86561-86438) | |
| 611-720, gnl|panTro1|chr3 (92560777-92560653) | |
| 611-720, gnl|rheMac2|chr5 (75984713-75984589) | |
| 611-720, gnl|rn3|chr14 (36032254-36032130) | |
| 611-720, gnl|tetNig1|chr18 (3420707-3420834) | |
| 611-720, gnl|xenTro1|scaffold_248 (517703-517827) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| eru (0.240096) | |
| lun (0.150489) | |
| spl (0.143184) | |
| ldo (0.0970026) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.240096) | |
| lun (0.150489) | |
| spl (0.143184) | |
| ldo (0.0970026) |