Ss1.1-Ova1-OVRM10101E06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGCCCCAGCATGGCTACCCCCAGGACTGCGTGTCGGGAAGCCGCTGTGCTCTCTCTTT CCTGACAGTCCCTAGCTTCTGTGGTCTCCTTCTCTTCCCCAGCCCACTCCAGCAGACATG TTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGGGTCGGACAGGAGAAAG CTTCGTGCAGATGTGACAGCTGTTTTCCCCACTCTTGGAACGGATCAGGTCTCTGAGTTA ATACCTGGAAAGGAAGAGCTCAACATTGTGAGGTTGTATGCTCACAGAGGGGACGCAGTG ACTGTGTACGTGAGTGGTGGTAACCCCATCCTATTTGAACTGGAGAAAAACCTATATCCA ACAGTGTACACCTTGTGGTCTTATCCTGATCTTCTACCAACGTTTACAACATGGCCTCTG GTGCTCGAGAAACTGGTAGGGGGAGCAGATTTGATGCTGCCAGGGCTAGTGGTGCCCCCT GCTGGTCTGCCTCAGGTACAGAAAGGTGACCTCTGTGCCATTGCCTTGGTGGGGAACAGA GCCCCCGTTGCCATCGGAGTCGCTGCCATGTCCACGGCTGAGATGCTGACCTCAGGTCTG AAGGGAAGGGGCTTCTCTGTGCTCCACACCTACCAGGACCATTTGTGGCGATCTGGAGAA AAGTCCTCTCCACCATCCATTGCTCCACTGGCCCTGGATCCCCCCGATCCCTGTGAAGAG AAGGGGTCTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGCCCCAGCATGGCTACCCCCAGGACTGCGTGTCGGGAAGCCGCTGTGCTCTCTCTTT CCTGACAGTCCCTAGCTTCTGTGGTCTCCTTCTCTTCCCCAGCCCACTCCAGCAGACATG TTTGCCAAGGCCTTTCGGGTCAAGTCCAACACGGCCATCAAGGGGTCGGACAGGAGAAAG CTTCGTGCAGATGTGACAGCTGTTTTCCCCACTCTTGGAACGGATCAGGTCTCTGAGTTA ATACCTGGAAAGGAAGAGCTCAACATTGTGAGGTTGTATGCTCACAGAGGGGACGCAGTG ACTGTGTACGTGAGTGGTGGTAACCCCATCCTATTTGAACTGGAGAAAAACCTATATCCA ACAGTGTACACCTTGTGGTCTTATCCTGATCTTCTACCAACGTTTACAACATGGCCTCTG GTGCTCGAGAAACTGGTAGGGGGAGCAGATTTGATGCTGCCAGGGCTAGTGGTGCCCCCT GCTGGTCTGCCTCAGGTACAGAAAGGTGACCTCTGTGCCATTGCCTTGGTGGGGAACAGA GCCCCCGTTGCCATCGGAGTCGCTGCCATGTCCACGGCTGAGATGCTGACCTCAGGTCTG AAGGGAAGGGGCTTCTCTGTGCTCCACACCTACCAGGACCATTTGTGGCGATCTGGAGAA AAGTCCTCTCCACCATCCATTGCTCCACTGGCCCTGGATCCCCCCGATCCCTGTGAAGAG AAGGGGTCTGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 171-364, gnl|bosTau2|chr16 (3129480-3129287) | |
| 171-364, gnl|canFam2|chr38 (5870314-5870535) | |
| 171-364, gnl|danRer3|chr8 (33952975-33953198) | |
| 171-364, gnl|dasNov1|scaffold_2503 (12356-12578) | |
| 171-364, gnl|echTel1|scaffold_185395 (1633-1412) | |
| 171-364, gnl|fr1|chrUn (81158035-81157815) | |
| 171-364, gnl|hg17|chr1 (203172922-203173143) | |
| 171-364, gnl|Hg17|chr1 (203173125-203172932) | |
| 171-364, gnl|mm7|chr1 (131058550-131058329) | |
| 171-364, gnl|Mm7|chr1 (131058345-131058538) | |
| 171-364, gnl|monDom2|scaffold_13 (8632013-8632235) | |
| 171-364, gnl|oryCun1|scaffold_203319 (44501-44287) | |
| 171-364, gnl|panTro1|chr1 (186758501-186758722) | |
| 171-364, gnl|rheMac2|chr1 (163753342-163753121) | |
| 171-364, gnl|rn3|chr13 (44115033-44114812) | |
| 171-364, gnl|tetNig1|chr9 (6373144-6373339) | |
| 171-364, gnl|xenTro1|scaffold_736 (399647-399442) | |
| 537-648, gnl|bosTau2|chr16 (3124131-3124020) | |
| 537-648, gnl|canFam2|chr38 (5865490-5865632) | |
| 537-648, gnl|danRer3|chr8 (33949145-33949285) | |
| 537-648, gnl|dasNov1|scaffold_2503 (7339-7478) | |
| 537-648, gnl|echTel1|scaffold_172603 (881-734) | |
| 537-648, gnl|fr1|chrUn (81158582-81158462) | |
| 537-648, gnl|hg17|chr1 (203167121-203167263) | |
| 537-648, gnl|Hg17|chr1 (203167258-203167147) | |
| 537-648, gnl|loxAfr1|scaffold_5536 (3237-3086) | |
| 537-648, gnl|mm7|chr1 (131062446-131062308) | |
| 537-648, gnl|Mm7|chr1 (131062308-131062419) | |
| 537-648, gnl|monDom2|scaffold_13 (8623683-8623827) | |
| 537-648, gnl|oryCun1|scaffold_203319 (49994-49853) | |
| 537-648, gnl|panTro1|chr1 (186752741-186752883) | |
| 537-648, gnl|rheMac2|chr1 (163759068-163758926) | |
| 537-648, gnl|rn3|chr13 (44118092-44117972) | |
| 537-648, gnl|tetNig1|chr9 (6372567-6372688) | |
| 537-648, gnl|xenTro1|scaffold_736 (406106-405971) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 171-364, gnl|bosTau2|chr16 (3129480-3129287) | |
| 171-364, gnl|canFam2|chr38 (5870314-5870535) | |
| 171-364, gnl|danRer3|chr8 (33952975-33953198) | |
| 171-364, gnl|dasNov1|scaffold_2503 (12356-12578) | |
| 171-364, gnl|echTel1|scaffold_185395 (1633-1412) | |
| 171-364, gnl|fr1|chrUn (81158035-81157815) | |
| 171-364, gnl|hg17|chr1 (203172922-203173143) | |
| 171-364, gnl|Hg17|chr1 (203173125-203172932) | |
| 171-364, gnl|mm7|chr1 (131058550-131058329) | |
| 171-364, gnl|Mm7|chr1 (131058345-131058538) | |
| 171-364, gnl|monDom2|scaffold_13 (8632013-8632235) | |
| 171-364, gnl|oryCun1|scaffold_203319 (44501-44287) | |
| 171-364, gnl|panTro1|chr1 (186758501-186758722) | |
| 171-364, gnl|rheMac2|chr1 (163753342-163753121) | |
| 171-364, gnl|rn3|chr13 (44115033-44114812) | |
| 171-364, gnl|tetNig1|chr9 (6373144-6373339) | |
| 171-364, gnl|xenTro1|scaffold_736 (399647-399442) | |
| 537-648, gnl|bosTau2|chr16 (3124131-3124020) | |
| 537-648, gnl|canFam2|chr38 (5865490-5865632) | |
| 537-648, gnl|danRer3|chr8 (33949145-33949285) | |
| 537-648, gnl|dasNov1|scaffold_2503 (7339-7478) | |
| 537-648, gnl|echTel1|scaffold_172603 (881-734) | |
| 537-648, gnl|fr1|chrUn (81158582-81158462) | |
| 537-648, gnl|hg17|chr1 (203167121-203167263) | |
| 537-648, gnl|Hg17|chr1 (203167258-203167147) | |
| 537-648, gnl|loxAfr1|scaffold_5536 (3237-3086) | |
| 537-648, gnl|mm7|chr1 (131062446-131062308) | |
| 537-648, gnl|Mm7|chr1 (131062308-131062419) | |
| 537-648, gnl|monDom2|scaffold_13 (8623683-8623827) | |
| 537-648, gnl|oryCun1|scaffold_203319 (49994-49853) | |
| 537-648, gnl|panTro1|chr1 (186752741-186752883) | |
| 537-648, gnl|rheMac2|chr1 (163759068-163758926) | |
| 537-648, gnl|rn3|chr13 (44118092-44117972) | |
| 537-648, gnl|tetNig1|chr9 (6372567-6372688) | |
| 537-648, gnl|xenTro1|scaffold_736 (406106-405971) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) | |
| med (0.116252) |