Ss1.1-Ova1-OVRM10101E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAGACGTTTAACTCTTGTCTAGTCTCGCCGCCGCCACGGCGGCTCGCGGGCCTTGGGCT TCGCTGGAAGCATGAGCCTTCTTGCCCGCCGCCACTGGCGCTGCGCGAGCCGCGGACAGT GCGTGCCGGGGCCCCGGGCGCACAGCCTAGGATCCCTCTCTCCGGCAGCTGGGGCGCCGA AGGAGCTTGGGCCGGGGCAGGCAGCAGGCAAACTGTGCGTGACCGCGCCTGCTGGGGACT TCACCATCCGTGCACTGGGACCCGGGGAAGAAGAACCAGAAGCTCCCCATCCCCTCCACC ATTGCGGGGACTCCTCAGGGATTCGTTTTGGGGTTCTCACTGACTTCTAAGGACGCGTTG CCCCTCTCCGACCCCAGCTCAGGCGGCCACCTGTCTTTGCCGCGGTGACCCTTCTCTCAT GACCCTGCGGTGCCTCGAGCCCTCCGGGAATGGCGCGGAAGGGACGCAGAGCCAGTGGGG GACCTCGGGGTCGGCGGAGGAGCCGTCCCCAGAGGCGGCGCGACTGGCGAAAGCCCTGCG GGAGCTTAGTCACACAGGTTGGTACTGGGGAAGTATGACTGTTAATGAAGCCAAAGAGAA ATTAAAAGAGGCACCCGAAGGAACTTTCTTGATTAGAGATAGTTCGCACTCAGACTACCT ACTAACAATATCTGTTAAAACATCAGCTGGACCAACTAATCTGCGCATCGAATACCAAGA CGGGAAATTCAGATTGGACTCTATCATATGTGTCAAGTCCAAGCTTAAGCAATTTGACAG TGTGGTTCATCTGATCGACTACTATGTTCAGATGTGCAAGGATAAGCGGACGGGCCCAGA AGCCCCCCGGAACGGCACCGTTCACCTCTATCTGACCAAACCGCTCTACACATCAGCACC ACCCCTGCAGCATCTCTGTAGACTCACCATTAACAAATGTACCGGTACTATCTGGGGACT GCCTTTACCAACAAGACTAAAAGATTACTTGGAAGAATATAAATTCCAGGTGTAAGTGTT TCTCGTTTGCTAAACACGCCTCCTGTAGCGTCTCTCGGAATGCAGCTCTGTGAGAGAGGA CCCAGACCCCAGACGGGAGTGCCGGCCCTGGAGGACCCCGCGGAACGCTAAGAACCGCTG AAGGCCATCTCACTTAAACGCGTGGCAAGGTAGCTAGGTCTTTAAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAGACGTTTAACTCTTGTCTAGTCTCGCCGCCGCCACGGCGGCTCGCGGGCCTTGGGCT TCGCTGGAAGCATGAGCCTTCTTGCCCGCCGCCACTGGCGCTGCGCGAGCCGCGGACAGT GCGTGCCGGGGCCCCGGGCGCACAGCCTAGGATCCCTCTCTCCGGCAGCTGGGGCGCCGA AGGAGCTTGGGCCGGGGCAGGCAGCAGGCAAACTGTGCGTGACCGCGCCTGCTGGGGACT TCACCATCCGTGCACTGGGACCCGGGGAAGAAGAACCAGAAGCTCCCCATCCCCTCCACC ATTGCGGGGACTCCTCAGGGATTCGTTTTGGGGTTCTCACTGACTTCTAAGGACGCGTTG CCCCTCTCCGACCCCAGCTCAGGCGGCCACCTGTCTTTGCCGCGGTGACCCTTCTCTCAT GACCCTGCGGTGCCTCGAGCCCTCCGGGAATGGCGCGGAAGGGACGCAGAGCCAGTGGGG GACCTCGGGGTCGGCGGAGGAGCCGTCCCCAGAGGCGGCGCGACTGGCGAAAGCCCTGCG GGAGCTTAGTCACACAGGTTGGTACTGGGGAAGTATGACTGTTAATGAAGCCAAAGAGAA ATTAAAAGAGGCACCCGAAGGAACTTTCTTGATTAGAGATAGTTCGCACTCAGACTACCT ACTAACAATATCTGTTAAAACATCAGCTGGACCAACTAATCTGCGCATCGAATACCAAGA CGGGAAATTCAGATTGGACTCTATCATATGTGTCAAGTCCAAGCTTAAGCAATTTGACAG TGTGGTTCATCTGATCGACTACTATGTTCAGATGTGCAAGGATAAGCGGACGGGCCCAGA AGCCCCCCGGAACGGCACCGTTCACCTCTATCTGACCAAACCGCTCTACACATCAGCACC ACCCCTGCAGCATCTCTGTAGACTCACCATTAACAAATGTACCGGTACTATCTGGGGACT GCCTTTACCAACAAGACTAAAAGATTACTTGGAAGAATATAAATTCCAGGTGTAAGTGTT TCTCGTTTGCTAAACACGCCTCCTGTAGCGTCTCTCGGAATGCAGCTCTGTGAGAGAGGA CCCAGACCCCAGACGGGAGTGCCGGCCCTGGAGGACCCCGCGGAACGCTAAGAACCGCTG AAGGCCATCTCACTTAAACGCGTGGCAAGGTAGCTAGGTCTTTAAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 19-207, gnl|bosTau2|chr5 (15401781-15401591) | |
| 19-207, gnl|canFam2|chr15 (36795283-36795852) | |
| 19-207, gnl|dasNov1|scaffold_8143 (33479-32987) | |
| 19-207, gnl|echTel1|scaffold_311669 (52703-52215) | |
| 19-207, gnl|hg17|chr12 (92467173-92467654) | |
| 19-207, gnl|Hg17|chr12 (92467287-92467467) | |
| 19-207, gnl|mm7|chr10 (94977877-94977424) | |
| 19-207, gnl|Mm7|chr10 (94977775-94977597) | |
| 19-207, gnl|monDom2|scaffold_34 (22790939-22790436) | |
| 19-207, gnl|oryCun1|scaffold_204087 (86084-85641) | |
| 19-207, gnl|panTro1|chr10 (94639423-94639903) | |
| 19-207, gnl|rheMac2|chr11 (94791527-94792011) | |
| 19-207, gnl|rn3|chr7 (32630285-32629836) | |
| 555-1187, gnl|bosTau2|chr5 (15398215-15397589) | |
| 555-1187, gnl|canFam2|chr15 (36798932-36799407) | |
| 555-1187, gnl|danRer3|chr4 (19688581-19688111) | |
| 555-1187, gnl|dasNov1|scaffold_9683 (52268-52740) | |
| 555-1187, gnl|echTel1|scaffold_311669 (48817-48342) | |
| 555-1187, gnl|fr1|chrUn (163782014-163782534) | |
| 555-1187, gnl|galGal2|chr1 (41700838-41701299) | |
| 555-1187, gnl|hg17|chr12 (92470961-92471436) | |
| 555-1187, gnl|Hg17|chr12 (92470963-92471594) | |
| 555-1187, gnl|loxAfr1|scaffold_38146 (17088-16633) | |
| 555-1187, gnl|mm7|chr10 (94974102-94973614) | |
| 555-1187, gnl|Mm7|chr10 (94974098-94973446) | |
| 555-1187, gnl|monDom2|scaffold_34 (22786455-22785979) | |
| 555-1187, gnl|oryCun1|scaffold_204087 (82370-81915) | |
| 555-1187, gnl|panTro1|chr10 (94643202-94643677) | |
| 555-1187, gnl|rheMac2|chr11 (94795286-94795761) | |
| 555-1187, gnl|rn3|chr7 (32626552-32626056) | |
| 555-1187, gnl|tetNig1|chrUn_random (126325258-126325741) | |
| 555-1187, gnl|xenTro1|scaffold_109 (1800164-1800633) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-207, gnl|bosTau2|chr5 (15401781-15401591) | |
| 19-207, gnl|canFam2|chr15 (36795283-36795852) | |
| 19-207, gnl|dasNov1|scaffold_8143 (33479-32987) | |
| 19-207, gnl|echTel1|scaffold_311669 (52703-52215) | |
| 19-207, gnl|hg17|chr12 (92467173-92467654) | |
| 19-207, gnl|Hg17|chr12 (92467287-92467467) | |
| 19-207, gnl|mm7|chr10 (94977877-94977424) | |
| 19-207, gnl|Mm7|chr10 (94977775-94977597) | |
| 19-207, gnl|monDom2|scaffold_34 (22790939-22790436) | |
| 19-207, gnl|oryCun1|scaffold_204087 (86084-85641) | |
| 19-207, gnl|panTro1|chr10 (94639423-94639903) | |
| 19-207, gnl|rheMac2|chr11 (94791527-94792011) | |
| 19-207, gnl|rn3|chr7 (32630285-32629836) | |
| 555-1187, gnl|bosTau2|chr5 (15398215-15397589) | |
| 555-1187, gnl|canFam2|chr15 (36798932-36799407) | |
| 555-1187, gnl|danRer3|chr4 (19688581-19688111) | |
| 555-1187, gnl|dasNov1|scaffold_9683 (52268-52740) | |
| 555-1187, gnl|echTel1|scaffold_311669 (48817-48342) | |
| 555-1187, gnl|fr1|chrUn (163782014-163782534) | |
| 555-1187, gnl|galGal2|chr1 (41700838-41701299) | |
| 555-1187, gnl|hg17|chr12 (92470961-92471436) | |
| 555-1187, gnl|Hg17|chr12 (92470963-92471594) | |
| 555-1187, gnl|loxAfr1|scaffold_38146 (17088-16633) | |
| 555-1187, gnl|mm7|chr10 (94974102-94973614) | |
| 555-1187, gnl|Mm7|chr10 (94974098-94973446) | |
| 555-1187, gnl|monDom2|scaffold_34 (22786455-22785979) | |
| 555-1187, gnl|oryCun1|scaffold_204087 (82370-81915) | |
| 555-1187, gnl|panTro1|chr10 (94643202-94643677) | |
| 555-1187, gnl|rheMac2|chr11 (94795286-94795761) | |
| 555-1187, gnl|rn3|chr7 (32626552-32626056) | |
| 555-1187, gnl|tetNig1|chrUn_random (126325258-126325741) | |
| 555-1187, gnl|xenTro1|scaffold_109 (1800164-1800633) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cty (0.20816) | |
| cut (0.169924) | |
| ese (0.126502) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| cut (0.169924) | |
| ese (0.126502) | |
| pgl (0.118483) |