Ss1.1-Ova1-OVRM10101H08.5
|
TGGGGGCAGCGGGGAGCAGCGGCTGGCGGCGGCGGAGAGGCTTGGCAGGGTCGGCGGCGG
AACGCCCTGAAAGCGGAGTGGCGGGGCGCCCAGAGGTGTAGCGGTCGCGCCCTCCTCGGC
CTCACTATGCCCGGCTGGGGGCTGCTGGGTAGGGCCGGCGCCCGGGTACTGGGCTGCGGC
GCGGATGGCCTGGGTGCCTCCCGGGGCTTGGGAAACAGAACAGACATCTGTCTTTTGGTT
AGAAGTCTCCATGGCAAGAGTGTTACTTGGTGGGATGAGCATCTTTCTGAAGAAAACGTT
CCCTTTGTTAAGCAGTTGGTCTCTGATGAAAATAAAGCCCAATTAGCAAGTAAACTCTGT
CCTCTGAAAGATGAGCCATGGCCTATACACCCTTGGGAACCAGGTTCCTCTAGAGTAGGC
CTCATTGCACTGAAGCTAGGCATGATGCCCTTATGGACCAAAGATGGTCAGAAGCATGTA
GTCACGTTACTTCAGGTACAAGACTGTCATGTCCTAAAATATACTCCAAAGGAAAATCAT
AATGGAAAAATGGCAGCCCTAACTGTAGGAGGAAAAACTGTATCACATTTCCATAAATCT
GCATCTATATTGGAATTTTACCAGGAACTTGGATTGCCTCCAAAACAGAAAGTTAAAATC
TTTAATGTAACAGAAAATGCTGTAATTAAGCCAGGCACCCCTCTATACGCTGCTCACTTT
CGTCCAGGACAGTATGTGGATGTCACGGCCAAAACTATTGGCAAAGGTTTTCAAGGTGTC
ATGAGAAGATGGGGATTTAAAGGCCAGCCTGCTACTCATGGTCAAACGAAAACCCACAGG
AGGCCTGGAGCTATTTCAACTGGTGATGTTGCCAGAGTGTGGCCTGGAACTAAAATGCCT
GGACAGTTGGGGAACATCGATAGGACAGCATTTGGACTGAAAGTGTGGAGAATAAACACA
AAACACAATATAATCTATGTAAATGGCTCTGTACCTGGACACAAAAATTGCCTAGTGAAG
ATCAAAGATTCTAAACTGCCTGCATATAAGGATTTCTGTAAAAATCTGCCATTCCCCACC
TACTTTCCTGATGGAGATGAAGAGGCACTACCAGAAGATTTGTATGATGAAAATGTGTGT
CAGCCTGGGGCACCTTCTATTACATTCACCTGACTTCATTGGACATTACTCACATATCCT
GTGAATTCTGATGAGCCTGAGCAATAAAATAACCAGGAATTGTATTGCCTTAGTTACCAC
ACTTATCTTTTGTCAAGGGCATAAATATATCATTCATCCCCCAAGTGGATTTTGTATTTA
AAAATTACCACATTAAACAAATCAGTTAAGTAGATTGAATATGCCAAACTTAAGATGGAC
TGGCGATTTGCATATTAGCAAGTTCTTTGTAATTTGGGGGCTTTGTTGTTTCTTTTTTAA
CTATTTCTCAAGTTTATAAATATAACTTCTCTTACTAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCTTTTAAAAAATTTCCTGGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGGGGCAGCGGGGAGCAGCGGCTGGCGGCGGCGGAGAGGCTTGGCAGGGTCGGCGGCGG
AACGCCCTGAAAGCGGAGTGGCGGGGCGCCCAGAGGTGTAGCGGTCGCGCCCTCCTCGGC
CTCACTATGCCCGGCTGGGGGCTGCTGGGTAGGGCCGGCGCCCGGGTACTGGGCTGCGGC
GCGGATGGCCTGGGTGCCTCCCGGGGCTTGGGAAACAGAACAGACATCTGTCTTTTGGTT
AGAAGTCTCCATGGCAAGAGTGTTACTTGGTGGGATGAGCATCTTTCTGAAGAAAACGTT
CCCTTTGTTAAGCAGTTGGTCTCTGATGAAAATAAAGCCCAATTAGCAAGTAAACTCTGT
CCTCTGAAAGATGAGCCATGGCCTATACACCCTTGGGAACCAGGTTCCTCTAGAGTAGGC
CTCATTGCACTGAAGCTAGGCATGATGCCCTTATGGACCAAAGATGGTCAGAAGCATGTA
GTCACGTTACTTCAGGTACAAGACTGTCATGTCCTAAAATATACTCCAAAGGAAAATCAT
AATGGAAAAATGGCAGCCCTAACTGTAGGAGGAAAAACTGTATCACATTTCCATAAATCT
GCATCTATATTGGAATTTTACCAGGAACTTGGATTGCCTCCAAAACAGAAAGTTAAAATC
TTTAATGTAACAGAAAATGCTGTAATTAAGCCAGGCACCCCTCTATACGCTGCTCACTTT
CGTCCAGGACAGTATGTGGATGTCACGGCCAAAACTATTGGCAAAGGTTTTCAAGGTGTC
ATGAGAAGATGGGGATTTAAAGGCCAGCCTGCTACTCATGGTCAAACGAAAACCCACAGG
AGGCCTGGAGCTATTTCAACTGGTGATGTTGCCAGAGTGTGGCCTGGAACTAAAATGCCT
GGACAGTTGGGGAACATCGATAGGACAGCATTTGGACTGAAAGTGTGGAGAATAAACACA
AAACACAATATAATCTATGTAAATGGCTCTGTACCTGGACACAAAAATTGCCTAGTGAAG
ATCAAAGATTCTAAACTGCCTGCATATAAGGATTTCTGTAAAAATCTGCCATTCCCCACC
TACTTTCCTGATGGAGATGAAGAGGCACTACCAGAAGATTTGTATGATGAAAATGTGTGT
CAGCCTGGGGCACCTTCTATTACATTCACCTGACTTCATTGGACATTACTCACATATCCT
GTGAATTCTGATGAGCCTGAGCAATAAAATAACCAGGAATTGTATTGCCTTAGTTACCAC
ACTTATCTTTTGTCAAGGGCATAAATATATCATTCATCCCCCAAGTGGATTTTGTATTTA
AAAATTACCACATTAAACAAATCAGTTAAGTAGATTGAATATGCCAAACTTAAGATGGAC
TGGCGATTTGCATATTAGCAAGTTCTTTGTAATTTGGGGGCTTTGTTGTTTCTTTTTTAA
CTATTTCTCAAGTTTATAAATATAACTTCTCTTACTAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCTTTTAAAAAATTTCCTGGG |
|
gi|13097225|gb|AAH03375.1| |
Protein identifier
|
gi|13097225|gb|AAH03375.1| |
|
756-865, gnl|bosTau2|chr1 (89470025-89470134) |
|
756-865, gnl|canFam2|chr23 (31628318-31628431) |
|
756-865, gnl|danRer3|chr19 (16710216-16710103) |
|
756-865, gnl|dasNov1|scaffold_51976 (4844-4731) |
|
756-865, gnl|echTel1|scaffold_202518 (225-338) |
|
756-865, gnl|fr1|chrUn (126196190-126196303) |
|
756-865, gnl|hg17|chr3 (132672711-132672824) |
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756-865, gnl|Hg17|chr3 (132672821-132672712) |
|
756-865, gnl|mm7|chr9 (104787757-104787644) |
|
756-865, gnl|Mm7|chr9 (104787645-104787754) |
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756-865, gnl|monDom2|scaffold_7 (69484812-69484699) |
|
756-865, gnl|oryCun1|scaffold_213811 (231-344) |
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756-865, gnl|panTro1|chr2 (134764159-134764272) |
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756-865, gnl|rheMac2|chr2 (156229549-156229436) |
|
756-865, gnl|rn3|chr8 (110167182-110167069) |
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756-865, gnl|tetNig1|chr21 (797267-797365) |
|
756-865, gnl|xenTro1|scaffold_436 (62623-62736) |
| |
|
1019-1241, gnl|bosTau2|chr1 (89486810-89487038) |
|
1019-1241, gnl|Hg17|chr3 (132664419-132664188) |
|
1019-1241, gnl|Mm7|chr9 (104793260-104793471) |
| |
|
1306-1517, gnl|bosTau2|chr24 (39786963-39786744) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
756-865, gnl|bosTau2|chr1 (89470025-89470134) |
|
756-865, gnl|canFam2|chr23 (31628318-31628431) |
|
756-865, gnl|danRer3|chr19 (16710216-16710103) |
|
756-865, gnl|dasNov1|scaffold_51976 (4844-4731) |
|
756-865, gnl|echTel1|scaffold_202518 (225-338) |
|
756-865, gnl|fr1|chrUn (126196190-126196303) |
|
756-865, gnl|hg17|chr3 (132672711-132672824) |
|
756-865, gnl|Hg17|chr3 (132672821-132672712) |
|
756-865, gnl|mm7|chr9 (104787757-104787644) |
|
756-865, gnl|Mm7|chr9 (104787645-104787754) |
|
756-865, gnl|monDom2|scaffold_7 (69484812-69484699) |
|
756-865, gnl|oryCun1|scaffold_213811 (231-344) |
|
756-865, gnl|panTro1|chr2 (134764159-134764272) |
|
756-865, gnl|rheMac2|chr2 (156229549-156229436) |
|
756-865, gnl|rn3|chr8 (110167182-110167069) |
|
756-865, gnl|tetNig1|chr21 (797267-797365) |
|
756-865, gnl|xenTro1|scaffold_436 (62623-62736) |
| |
|
1019-1241, gnl|bosTau2|chr1 (89486810-89487038) |
|
1019-1241, gnl|Hg17|chr3 (132664419-132664188) |
|
1019-1241, gnl|Mm7|chr9 (104793260-104793471) |
| |
|
1306-1517, gnl|bosTau2|chr24 (39786963-39786744) |
|
fat (0.442282) |
|
amn (0.417711) |
|
cty (0.41632) |
|
hea (0.408998) |
|
ova (0.387397) |
|
sug (0.381874) |
|
tra (0.369276) |
|
bfe (0.299715) |
|
spl (0.286369) |
|
ste (0.270416) |
|
kid (0.259471) |
|
ret (0.257467) |
|
mgp (0.230681) |
|
ecc (0.23007) |
|
mas (0.210305) |
|
fcc (0.197785) |
|
ldo (0.194005) |
|
nlu (0.191681) |
|
rec (0.17307) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cag (0.151194) |
|
lun (0.150489) |
|
ssp (0.13552) |
|
cov (0.132153) |
|
ese (0.126502) |
|
bla (0.124347) |
|
eru (0.120048) |
|
med (0.116252) |
|
spc (0.113366) |
|
fat (0.442282) |
|
amn (0.417711) |
|
cty (0.41632) |
|
hea (0.408998) |
|
ova (0.387397) |
|
sug (0.381874) |
|
tra (0.369276) |
|
bfe (0.299715) |
|
spl (0.286369) |
|
ste (0.270416) |
|
kid (0.259471) |
|
ret (0.257467) |
|
mgp (0.230681) |
|
ecc (0.23007) |
|
mas (0.210305) |
|
fcc (0.197785) |
|
ldo (0.194005) |
|
nlu (0.191681) |
|
rec (0.17307) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cag (0.151194) |
|
lun (0.150489) |
|
ssp (0.13552) |
|
cov (0.132153) |
|
ese (0.126502) |
|
bla (0.124347) |
|
eru (0.120048) |
|
med (0.116252) |
|
spc (0.113366) |
